| GenBank top hits | e value | %identity | Alignment |
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| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 4.3e-54 | 83.46 | Show/hide |
Query: LRLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
LRLGHINLN+I RL+K+G+L+QLEDNSLP C+SCLEGKMTKRSFT KGLR K PLELVHSDLCGPMNVK R GY+YFISFIDD+SRYGHVYL+ +KS+SF
Subjt: LRLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
Query: EKFKEYKAEVENESGKTIKTFRSDRGG
EKFKEYKAEVENE GKTIKT RSDRGG
Subjt: EKFKEYKAEVENESGKTIKTFRSDRGG
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| KAA0036106.1 gag/pol protein [Cucumis melo var. makuwa] | 7.3e-54 | 89.83 | Show/hide |
Query: KIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSFEKFKEYKAE
KIGRL+K+GLLSQLEDNSLP CDSCLEGKMTKRSFT KGLR KTPLELVHSDLCGPMN K R GY+YFISFIDDYSRYGHVYLI NKSDSFEKFKEYKA+
Subjt: KIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSFEKFKEYKAE
Query: VENESGKTIKTFRSDRGG
VENESGKTIKTF+SDRGG
Subjt: VENESGKTIKTFRSDRGG
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| KAA0050872.1 gag/pol protein [Cucumis melo var. makuwa] | 7.5e-59 | 91.34 | Show/hide |
Query: LRLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
LRLGHINLN IGRL+K+GLLSQLEDNSLP CDSCLEGKMT+RSFT KGLR KTPLELVHSDLCGPMNVK R GYKYFISFID+YSRYGHVYLIQNK DSF
Subjt: LRLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
Query: EKFKEYKAEVENESGKTIKTFRSDRGG
EKFKEYKAEVENESGKTIKTFRSDRGG
Subjt: EKFKEYKAEVENESGKTIKTFRSDRGG
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| TYK08480.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-55 | 90.91 | Show/hide |
Query: LRLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
LRLGHINLN IGRL+K+GLLSQLEDNSLP CDSCLEGKMT+RSFT KGLR KTPLELVHSDLCGPMNVK R GYKYFISFID+YSRYGHVYLIQNK DSF
Subjt: LRLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
Query: EKFKEYKAEVENESGKTIKTF
EKFKEYKAEVENESGKTIKTF
Subjt: EKFKEYKAEVENESGKTIKTF
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| TYK27613.1 gag/pol protein [Cucumis melo var. makuwa] | 3.6e-53 | 88.98 | Show/hide |
Query: KIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSFEKFKEYKAE
KIGRL+K+GLLSQLEDNSLP CDSCLEGKMTKRSFT KGLR KTPLELVH DLCGPMN K R GY+YFISFIDDYSRYGHVYLI NKSDSFEKFKEYKA+
Subjt: KIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSFEKFKEYKAE
Query: VENESGKTIKTFRSDRGG
VENESGKTIKTF+SDRGG
Subjt: VENESGKTIKTFRSDRGG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T1K6 Gag/pol protein | 3.5e-54 | 89.83 | Show/hide |
Query: KIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSFEKFKEYKAE
KIGRL+K+GLLSQLEDNSLP CDSCLEGKMTKRSFT KGLR KTPLELVHSDLCGPMN K R GY+YFISFIDDYSRYGHVYLI NKSDSFEKFKEYKA+
Subjt: KIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSFEKFKEYKAE
Query: VENESGKTIKTFRSDRGG
VENESGKTIKTF+SDRGG
Subjt: VENESGKTIKTFRSDRGG
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| A0A5A7U4V3 Gag/pol protein | 3.6e-59 | 91.34 | Show/hide |
Query: LRLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
LRLGHINLN IGRL+K+GLLSQLEDNSLP CDSCLEGKMT+RSFT KGLR KTPLELVHSDLCGPMNVK R GYKYFISFID+YSRYGHVYLIQNK DSF
Subjt: LRLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
Query: EKFKEYKAEVENESGKTIKTFRSDRGG
EKFKEYKAEVENESGKTIKTFRSDRGG
Subjt: EKFKEYKAEVENESGKTIKTFRSDRGG
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| A0A5D3CAW3 Gag/pol protein | 1.1e-55 | 90.91 | Show/hide |
Query: LRLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
LRLGHINLN IGRL+K+GLLSQLEDNSLP CDSCLEGKMT+RSFT KGLR KTPLELVHSDLCGPMNVK R GYKYFISFID+YSRYGHVYLIQNK DSF
Subjt: LRLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
Query: EKFKEYKAEVENESGKTIKTF
EKFKEYKAEVENESGKTIKTF
Subjt: EKFKEYKAEVENESGKTIKTF
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| A0A5D3DV96 Gag/pol protein | 1.8e-53 | 88.98 | Show/hide |
Query: KIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSFEKFKEYKAE
KIGRL+K+GLLSQLEDNSLP CDSCLEGKMTKRSFT KGLR KTPLELVH DLCGPMN K R GY+YFISFIDDYSRYGHVYLI NKSDSFEKFKEYKA+
Subjt: KIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSFEKFKEYKAE
Query: VENESGKTIKTFRSDRGG
VENESGKTIKTF+SDRGG
Subjt: VENESGKTIKTFRSDRGG
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| E2GK51 Gag/pol protein (Fragment) | 2.1e-54 | 83.46 | Show/hide |
Query: LRLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
LRLGHINLN+I RL+K+G+L+QLEDNSLP C+SCLEGKMTKRSFT KGLR K PLELVHSDLCGPMNVK R GY+YFISFIDD+SRYGHVYL+ +KS+SF
Subjt: LRLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
Query: EKFKEYKAEVENESGKTIKTFRSDRGG
EKFKEYKAEVENE GKTIKT RSDRGG
Subjt: EKFKEYKAEVENESGKTIKTFRSDRGG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.6e-11 | 33.33 | Show/hide |
Query: RLGHINLNKIGRLIKNGLLSQLE-----DNSLPSCDSCLEGKMTKRSFTE--KGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQ
R GHI+ K+ + + + S + S C+ CL GK + F + +K PL +VHSD+CGP+ T YF+ F+D ++ Y YLI+
Subjt: RLGHINLNKIGRLIKNGLLSQLE-----DNSLPSCDSCLEGKMTKRSFTE--KGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQ
Query: NKSDSFEKFKEYKAEVE
KSD F F+++ A+ E
Subjt: NKSDSFEKFKEYKAEVE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.5e-21 | 40.48 | Show/hide |
Query: RLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSFE
R+GH++ + L K L+S + ++ CD CL GK + SF R L+LV+SD+CGPM +++ G KYF++FIDD SR VY+++ K F+
Subjt: RLGHINLNKIGRLIKNGLLSQLEDNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSFE
Query: KFKEYKAEVENESGKTIKTFRSDRGG
F+++ A VE E+G+ +K RSD GG
Subjt: KFKEYKAEVENESGKTIKTFRSDRGG
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 8.2e-08 | 27.54 | Show/hide |
Query: LGHINLNKIGRLIKNGLLSQLEDNSLP-------SCDSCLEGKMTKRSFTEKGLRVK-----TPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHV
LGH N I + +K ++ L+++ + C CL GK TK KG R+K P + +H+D+ GP++ + YFISF D+ +R+ V
Subjt: LGHINLNKIGRLIKNGLLSQLEDNSLP-------SCDSCLEGKMTKRSFTEKGLRVK-----TPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHV
Query: YLIQNKSDS--FEKFKEYKAEVENESGKTIKTFRSDRG
Y + ++ + F A ++N+ + + DRG
Subjt: YLIQNKSDS--FEKFKEYKAEVENESGKTIKTFRSDRG
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.3e-10 | 33.07 | Show/hide |
Query: RLGHINLNKIGRLIKNGLLSQLE-DNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
RLGH + + +I N LS L + SC CL K K F++ + PLE ++SD+ + + Y+Y++ F+D ++RY +Y ++ KS
Subjt: RLGHINLNKIGRLIKNGLLSQLE-DNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
Query: EKFKEYKAEVENESGKTIKTFRSDRGG
E F +K +EN I TF SD GG
Subjt: EKFKEYKAEVENESGKTIKTFRSDRGG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.6e-09 | 32.28 | Show/hide |
Query: RLGHINLNKIGRLIKNGLLSQLE-DNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
RLGH +L + +I N L L + L SC C K K F+ + PLE ++SD+ + + Y+Y++ F+D ++RY +Y ++ KS
Subjt: RLGHINLNKIGRLIKNGLLSQLE-DNSLPSCDSCLEGKMTKRSFTEKGLRVKTPLELVHSDLCGPMNVKTRRGYKYFISFIDDYSRYGHVYLIQNKSDSF
Query: EKFKEYKAEVENESGKTIKTFRSDRGG
+ F +K+ VEN I T SD GG
Subjt: EKFKEYKAEVENESGKTIKTFRSDRGG
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