| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 8.3e-59 | 83.82 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
MDVK AFLNGNLEESI M+QPEGFI +DQEQKVCKLQKSIYGLKQ SRSWNIRFD AI+SYGFEQ+VDEPCVYK+I+NS VAFL LYVDDILLIGN+V +
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
Query: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
L D+KKWL TQFQMKDL AQY+LGIQIVRNRKNKT
Subjt: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 5.7e-60 | 86.76 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
MDVK AFLNGNLEESI M+QPEGFIQK QEQKVCKLQKSIYGLKQ SRSWNIRFD I+SYGFEQ+VDEPCVYKRIINSTVAFL LYVDDILLIGN V H
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
Query: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
L DIK+WL TQFQMKDL +AQYVLGIQIV+NRKNKT
Subjt: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
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| KAA0063026.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-58 | 85.29 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
MDVK AFLNGNLEESI M+QPEG IQK QEQKVCKLQKSIYGLKQ SRSWNIRFD AI+SYGF+Q+V+EPCVYKRI NSTVAFL LYVD+ILLIGN+V
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
Query: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
L DIKKWLATQFQMKDL NAQYVLGIQ VRNRKNKT
Subjt: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 5.4e-58 | 84.56 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
MDVK FLN NLEESI M+QPE FIQK QEQK+CKLQKSIYGLKQ SRS NIRFD AI+SYG EQ+VDEPCVYKRI+NSTVAFL LYVDDILLIGN+VGH
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
Query: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
L DIKKWLA QFQMKDL NAQYVLG+QIVRNRKNKT
Subjt: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
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| TYK09500.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-57 | 80.88 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
+DVK AFLNGNLEESI M QPEGFI+K QEQK+CK QKSIYGLKQ SRSWNIRFD AI+SYGFEQ+VD+PCVYK+++NS VAFL LYVDDILL+GN+VG+
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
Query: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
L DIKKWLATQFQMKD +AQYVLGIQIVRNRKN+T
Subjt: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 2.8e-60 | 86.76 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
MDVK AFLNGNLEESI M+QPEGFIQK QEQKVCKLQKSIYGLKQ SRSWNIRFD I+SYGFEQ+VDEPCVYKRIINSTVAFL LYVDDILLIGN V H
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
Query: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
L DIK+WL TQFQMKDL +AQYVLGIQIV+NRKNKT
Subjt: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
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| A0A5A7V9B0 Gag/pol protein | 1.5e-58 | 85.29 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
MDVK AFLNGNLEESI M+QPEG IQK QEQKVCKLQKSIYGLKQ SRSWNIRFD AI+SYGF+Q+V+EPCVYKRI NSTVAFL LYVD+ILLIGN+V
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
Query: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
L DIKKWLATQFQMKDL NAQYVLGIQ VRNRKNKT
Subjt: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
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| A0A5D3BX45 Gag/pol protein | 2.6e-58 | 84.56 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
MDVK FLN NLEESI M+QPE FIQK QEQK+CKLQKSIYGLKQ SRS NIRFD AI+SYG EQ+VDEPCVYKRI+NSTVAFL LYVDDILLIGN+VGH
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
Query: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
L DIKKWLA QFQMKDL NAQYVLG+QIVRNRKNKT
Subjt: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
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| A0A5D3CDT9 Gag/pol protein | 5.8e-58 | 80.88 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
+DVK AFLNGNLEESI M QPEGFI+K QEQK+CK QKSIYGLKQ SRSWNIRFD AI+SYGFEQ+VD+PCVYK+++NS VAFL LYVDDILL+GN+VG+
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
Query: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
L DIKKWLATQFQMKD +AQYVLGIQIVRNRKN+T
Subjt: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
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| E2GK51 Gag/pol protein (Fragment) | 4.0e-59 | 83.82 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
MDVK AFLNGNLEESI M+QPEGFI +DQEQKVCKLQKSIYGLKQ SRSWNIRFD AI+SYGFEQ+VDEPCVYK+I+NS VAFL LYVDDILLIGN+V +
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
Query: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
L D+KKWL TQFQMKDL AQY+LGIQIVRNRKNKT
Subjt: LPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNKT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.3e-18 | 38.17 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVY---KRIINSTVAFLALYVDDILLIGNN
MDVK AFLNG L+E I M P+G VCKL K+IYGLKQ +R W F+ A++ F + C+Y K IN + ++ LYVDD+++ +
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVY---KRIINSTVAFLALYVDDILLIGNN
Query: VGHLPDIKKWLATQFQMKDLENAQYVLGIQI
+ + + K++L +F+M DL ++ +GI+I
Subjt: VGHLPDIKKWLATQFQMKDLENAQYVLGIQI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.9e-28 | 46.32 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVY-KRIINSTVAFLALYVDDILLIGNNVG
+DVK AFL+G+LEE I M QPEGF ++ VCKL KS+YGLKQ R W ++FD ++S + + +PCVY KR + L LYVDD+L++G + G
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVY-KRIINSTVAFLALYVDDILLIGNNVG
Query: HLPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNK
+ +K L+ F MKDL AQ +LG++IVR R ++
Subjt: HLPDIKKWLATQFQMKDLENAQYVLGIQIVRNRKNK
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.3e-14 | 33.59 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
MDV AFLN ++E I + QP GF+ + V +L +YGLKQ WN + ++ GF +H E +Y R + ++A+YVDD+L+ +
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
Query: LPDIKKWLATQFQMKDLENAQYVLGIQI
+K+ L + MKDL LG+ I
Subjt: LPDIKKWLATQFQMKDLENAQYVLGIQI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.5e-20 | 37.69 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
+DV AFL G L + + M QP GFI KD+ VCKL+K++YGLKQ R+W + + + GF V + ++ ++ ++ +YVDDIL+ GN+
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
Query: LPDIKKWLATQFQMKDLENAQYVLGIQIVR
L + L+ +F +KD E Y LGI+ R
Subjt: LPDIKKWLATQFQMKDLENAQYVLGIQIVR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-19 | 35.38 | Show/hide |
Query: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
+DV AFL G L + + M QP GF+ KD+ VC+L+K+IYGLKQ R+W + + + GF + + ++ ++ ++ +YVDDIL+ GN+
Subjt: MDVKAAFLNGNLEESICMIQPEGFIQKDQEQKVCKLQKSIYGLKQVSRSWNIRFDIAIRSYGFEQHVDEPCVYKRIINSTVAFLALYVDDILLIGNNVGH
Query: LPDIKKWLATQFQMKDLENAQYVLGIQIVR
L L+ +F +K+ E+ Y LGI+ R
Subjt: LPDIKKWLATQFQMKDLENAQYVLGIQIVR
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