; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc12g0325331 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0325331
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionEukaryotic translation initiation factor 3 subunit A
Genome locationCMiso1.1chr12:15488697..15492461
RNA-Seq ExpressionCmc12g0325331
SyntenyCmc12g0325331
Gene Ontology termsGO:0005852 - eukaryotic translation initiation factor 3 complex (cellular component)
InterPro domainsIPR027512 - Eukaryotic translation initiation factor 3 subunit A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054340.1 eukaryotic translation initiation factor 3 subunit A [Cucumis melo var. makuwa]1.6e-1597.78Show/hide
Query:  ALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDV
        +LAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDV
Subjt:  ALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDV
KAA0063779.1 eukaryotic translation initiation factor 3 subunit A-like [Cucumis melo var. makuwa]1.2e-1385.42Show/hide
Query:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
        + ALAVSPYDSKHGASHL+LEHEKERNLRMANLIGF L S+LESRDV+
Subjt:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
KAG7024012.1 Eukaryotic translation initiation factor 3 subunit A [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1385.42Show/hide
Query:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
        + ALAVSPYDSKHGASHL+LEHEKERNLRMANLIGF L S+LESRDV+
Subjt:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
KGN66380.2 hypothetical protein Csa_023257 [Cucumis sativus]1.2e-1385.42Show/hide
Query:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
        + ALAVSPYDSKHGASHL+LEHEKERNLRMANLIGF L S+LESRDV+
Subjt:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
XP_011659077.2 eukaryotic translation initiation factor 3 subunit A [Cucumis sativus]1.2e-1385.42Show/hide
Query:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
        + ALAVSPYDSKHGASHL+LEHEKERNLRMANLIGF L S+LESRDV+
Subjt:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
TrEMBL top hitse value%identityAlignment
A0A1S3BCP4 Eukaryotic translation initiation factor 3 subunit A5.7e-1485.42Show/hide
Query:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
        + ALAVSPYDSKHGASHL+LEHEKERNLRMANLIGF L S+LESRDV+
Subjt:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
A0A5A7V982 Eukaryotic translation initiation factor 3 subunit A5.7e-1485.42Show/hide
Query:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
        + ALAVSPYDSKHGASHL+LEHEKERNLRMANLIGF L S+LESRDV+
Subjt:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
A0A5D3CKC0 Eukaryotic translation initiation factor 3 subunit A7.9e-1697.78Show/hide
Query:  ALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDV
        +LAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDV
Subjt:  ALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDV
A0A6J1HAC5 Eukaryotic translation initiation factor 3 subunit A5.7e-1485.42Show/hide
Query:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
        + ALAVSPYDSKHGASHL+LEHEKERNLRMANLIGF L S+LESRDV+
Subjt:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
A0A6J1HXV1 Eukaryotic translation initiation factor 3 subunit A5.7e-1485.42Show/hide
Query:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
        + ALAVSPYDSKHGASHL+LEHEKERNLRMANLIGF L S+LESRDV+
Subjt:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
SwissProt top hitse value%identityAlignment
Q40554 Eukaryotic translation initiation factor 3 subunit A1.2e-0860Show/hide
Query:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESR
        + AL+V PYD  +GASHL+LE+EKER+LR+ANLIGF +  + E+R
Subjt:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESR
Q9LD55 Eukaryotic translation initiation factor 3 subunit A5.3e-0954.17Show/hide
Query:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
        + AL++ P+D    ASH++LE+EKERNLRMANLIGF L  + E +D++
Subjt:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
Q9XHR2 Eukaryotic translation initiation factor 3 subunit A3.2e-0648.94Show/hide
Query:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDV
        + AL+VSPYD K+GA   + E+EKERN+R++NL+ F L ++ E+R++
Subjt:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDV
Arabidopsis top hitse value%identityAlignment
AT4G11420.1 eukaryotic translation initiation factor 3A3.8e-1054.17Show/hide
Query:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI
        + AL++ P+D    ASH++LE+EKERNLRMANLIGF L  + E +D++
Subjt:  MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCGCTTGCAGTGTCTCCCTATGACTCTAAGCATGGTGCTTCCCATTTACAACTTGAACATGAGAAAGAGCGGAATTTGAGGATGGCTAATCTTATAGGGTTCGG
TTTACATTCTGAACTTGAAAGTAGAGATGTGATTTATTACAACGACCATTTCTAG
mRNA sequenceShow/hide mRNA sequence
GGGTAATCGGAGGGACGAATAGCTCCGAAAAAGTTTTCCCAAATTCTTTTTCCCGTCCGTTTTTCTCTGCTCAAGGGACGCATAGCTCCCGCGAAATCAAAAGCCCTAAT
TGCAACCCTTCATTGAAAACTTTCGATCCAAACCCAAAATCTCTAAAATTTGCTCCACATTTTTTCTATATTTCATACAAAAACCTTTCCTCAATATAGTTTCTAGTTCT
ACGTTGCCTTTAGCGTCTGTTTCCACAATTGAATTCCTAAAAAAAGCATGTGGGCTTGCTTCAGAATCTCCTTCTTCCGCCCATCGAAAGCTCCAAATCGATGAAAAAAC
ATCCAATAGTACGAAGCCATTATCGGTTTCTTGAAATCATATGGATTCGACAATTCACAGATCGCCAAGTTGGTCTCGAGACAACCTTCGGTTCAATCCAAAGTATCCAC
CAATCTGAAGCCTAAATTTGAGTTCCTCCAGGATGTTGCAGATTTCTGTTTCAGCACTGCAAAGTTGGATCCAGAAACTGTAAGTTCTTACCCTAACTTATTCATGAGTG
CATTGGACAAGCGACTTCGATAGAGGTACAAAGTTCTTGAGATGGGATTGTAATTGGTCAATTTGAAGGAGTCTACATTGGTTTAGAACTTGGCAGATTGGTGTTCTATG
GTGGTGAAAATGTTATGAGCTACAATAGCATATGGAACAGGATGTTTGTCCTTTTGCTCTCAAAGTGTGGATGTATTCAACTCGTTTCTGACTGTCTTTGATTAATGAAA
GCGCTTGCAGTGTCTCCCTATGACTCTAAGCATGGTGCTTCCCATTTACAACTTGAACATGAGAAAGAGCGGAATTTGAGGATGGCTAATCTTATAGGGTTCGGTTTACA
TTCTGAACTTGAAAGTAGAGATGTGATTTATTACAACGACCATTTCTAGATTTTCTGGTTGATTGACGGACAGTGGAAGATAAAGTGACTGTCCCACCTTGGGGGACTTT
TTGAAGACTCGTTTGGGTGAAGTTTGGTCTTCTGGAAGATTCAATGTGTCCATGTGCTTCAGATTTGTGTAGTAATGAACACAAAGATCTACAAAATTGGAAAGATGAGG
CAGCAATTGTATACTGTTGGCAATGAATTTGACAGTTACAATAAATGGAGCTTAACAAATGGGAGAAGAACGATGGTTGAAGTGAATATGTGTATTTTTGTGTGTGCAGT
AAAGAGAATAAATGATTATGTGTGTGTTGCGCGTAAATGAACTTAGAAATAAATTAGACTTTCCTCCTAATTTATC
Protein sequenceShow/hide protein sequence
MKALAVSPYDSKHGASHLQLEHEKERNLRMANLIGFGLHSELESRDVIYYNDHF