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Cmc12g0328021 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0328021
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTTF-type domain-containing protein
Genome locationCMiso1.1chr12:19173518..19173826
RNA-Seq ExpressionCmc12g0328021
SyntenyCmc12g0328021
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066112.1 Dimer_Tnp_hAT domain-containing protein [Cucumis melo var. makuwa]1.3e-2969.31Show/hide
Query:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ
        FV L SIGDL+ KMV   +DKVY LVY+LLTLALILPV T T+E TFSA +++KT+LRNR+ DQWMNDCLIAYIE+DL DK+DN+ IM +FQ MK+R+GQ
Subjt:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ

Query:  L
        L
Subjt:  L

TYK00355.1 copia-type polyprotein [Cucumis melo var. makuwa]3.9e-3493.02Show/hide
Query:  MFVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNE
        MFVGLTSIGDLSQKMV  AKDKVYPLVYRLLTLALILPVT ATVE TFSA SIIKTQLRNRMEDQWMNDCL+AYIERDLFDKIDNE
Subjt:  MFVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNE

XP_008449194.1 PREDICTED: uncharacterized protein LOC103491145 [Cucumis melo]2.1e-4088.24Show/hide
Query:  MFVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRG
        MFVGLTSIGD SQKMV  AKDKVYPLVYRLLTLALILPVTTATV+  FSA SIIKTQ R RM+DQWMNDCL+AYIERDLFDKIDNEAIMY+FQNMKSRRG
Subjt:  MFVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRG

Query:  QL
        QL
Subjt:  QL

XP_030487038.1 zinc finger MYM-type protein 1-like [Cannabis sativa]2.2e-2968.32Show/hide
Query:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ
        F+GL SIGDL++KMV   K  VYPLVYRL+TLALILPV TATVE  FS+ +I+K++LRNRM DQ+MNDCL+ YIE+D+F+ +DNE IM +FQNMKSRRG+
Subjt:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ

Query:  L
        L
Subjt:  L

XP_030498012.1 zinc finger MYM-type protein 1-like [Cannabis sativa]2.9e-2967.33Show/hide
Query:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ
        F+GL SIGDL++KMV   K  +YPLVYRL+TLALILPV TATVE  FS+ +I+K++LRNRM DQ+MNDCL+ YIE+D+F+ +DNE IM +FQNMKSRRG+
Subjt:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A1S3BM43 uncharacterized protein LOC1034911451.0e-4088.24Show/hide
Query:  MFVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRG
        MFVGLTSIGD SQKMV  AKDKVYPLVYRLLTLALILPVTTATV+  FSA SIIKTQ R RM+DQWMNDCL+AYIERDLFDKIDNEAIMY+FQNMKSRRG
Subjt:  MFVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRG

Query:  QL
        QL
Subjt:  QL

A0A443P243 Dimer_Tnp_hAT domain-containing protein/DUF4371 domain-containing protein9.1e-2966.34Show/hide
Query:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ
        FVG+  IG L+QKMV   +D VYPL+Y LL LAL LPV TATVE  F A  I+K +LRN+MED+WMNDCL+AYIE+D+F+ ID+EAIM +FQNMK+RRGQ
Subjt:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ

Query:  L
        L
Subjt:  L

A0A5A7VCQ2 Dimer_Tnp_hAT domain-containing protein6.3e-3069.31Show/hide
Query:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ
        FV L SIGDL+ KMV   +DKVY LVY+LLTLALILPV T T+E TFSA +++KT+LRNR+ DQWMNDCLIAYIE+DL DK+DN+ IM +FQ MK+R+GQ
Subjt:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ

Query:  L
        L
Subjt:  L

A0A5D3BMQ7 Copia-type polyprotein1.9e-3493.02Show/hide
Query:  MFVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNE
        MFVGLTSIGDLSQKMV  AKDKVYPLVYRLLTLALILPVT ATVE TFSA SIIKTQLRNRMEDQWMNDCL+AYIERDLFDKIDNE
Subjt:  MFVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNE

A0A6P5TRY7 uncharacterized protein LOC1107701131.5e-2866.34Show/hide
Query:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ
        F  L  I DL+QKMV   KDK+YPLVY LLTLALILPV TA+VE  FSA +I+K +LRNR+ D WMNDCL+AYIE+D+F+ ID+E +M +FQNMK+RRGQ
Subjt:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ

Query:  L
        L
Subjt:  L

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19260.1 TTF-type zinc finger protein with HAT dimerisation domain2.6e-2047.52Show/hide
Query:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ
        F  L  +GDL++ MV   K   +PLVYRLL ++LILPV TATVE  FSA + +KT LRNR+ D +++DCL+ +IE+   + + NE+++ +FQ+M  RR  
Subjt:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ

Query:  L
        L
Subjt:  L

AT2G06541.1 TTF-type zinc finger protein with HAT dimerisation domain8.4e-1946.39Show/hide
Query:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSR
        F  L S+GDL++ M+   K   +P VYRLL + L LP+ TATVE  FSAT ++KT LRNR+ DQ++ND ++  ++R+LFD + N+ ++ +FQ+M++R
Subjt:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSR

AT2G06541.2 TTF-type zinc finger protein with HAT dimerisation domain8.4e-1946.39Show/hide
Query:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSR
        F  L S+GDL++ M+   K   +P VYRLL + L LP+ TATVE  FSAT ++KT LRNR+ DQ++ND ++  ++R+LFD + N+ ++ +FQ+M++R
Subjt:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSR

AT3G29765.1 General transcription factor 2-related zinc finger protein9.9e-2047.52Show/hide
Query:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ
        F  L  +GDL++ MV   K   +PLVYRLL L+LILPV TATV   FSA + +KT LRNR  D +++DCL+ +IE+ + + + NE+++ +FQ+M  RR  
Subjt:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQ

Query:  L
        L
Subjt:  L

AT4G09660.1 CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580)9.6e-0759.18Show/hide
Query:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSA
        F  L   GDL++ MV   K   +PLVYRLL L+LILPV TATVE  FSA
Subjt:  FVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTTGGGTTAACAAGTATTGGTGATCTTTCTCAAAAAATGGTGACAATAGCTAAAGATAAAGTTTACCCATTAGTCTATCGGTTGCTTACCTTAGCATTGATCTT
ACCAGTTACAACGGCTACCGTGGAGAGCACATTTTCTGCTACGAGCATTATAAAGACTCAGTTGCGTAATCGAATGGAAGACCAATGGATGAATGATTGTCTTATAGCAT
ATATTGAGAGAGATTTATTTGATAAGATAGATAATGAAGCTATTATGTATCAATTTCAAAATATGAAATCTCGTAGGGGACAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTTGGGTTAACAAGTATTGGTGATCTTTCTCAAAAAATGGTGACAATAGCTAAAGATAAAGTTTACCCATTAGTCTATCGGTTGCTTACCTTAGCATTGATCTT
ACCAGTTACAACGGCTACCGTGGAGAGCACATTTTCTGCTACGAGCATTATAAAGACTCAGTTGCGTAATCGAATGGAAGACCAATGGATGAATGATTGTCTTATAGCAT
ATATTGAGAGAGATTTATTTGATAAGATAGATAATGAAGCTATTATGTATCAATTTCAAAATATGAAATCTCGTAGGGGACAATTATGA
Protein sequenceShow/hide protein sequence
MFVGLTSIGDLSQKMVTIAKDKVYPLVYRLLTLALILPVTTATVESTFSATSIIKTQLRNRMEDQWMNDCLIAYIERDLFDKIDNEAIMYQFQNMKSRRGQL