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Cmc12g0332921 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0332921
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionF-box family protein
Genome locationCMiso1.1chr12:23013366..23016263
RNA-Seq ExpressionCmc12g0332921
SyntenyCmc12g0332921
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER56287.1 F-box family protein [Striga asiatica]1.7e-0433.33Show/hide
Query:  APRCVKNNKPRFFPVIQPCQVFHSCSVQVHQILGDEDVINRGNFISIAIQLGNISLF-KVSFVKTAFLGLGILPPPSSFSFMLPWKNRPCTRLTSN
        APR V +N P   P++   ++ HS   Q + IL  + +  R   +    Q+  +  F  V+ V+   LGL ILPPP +   +L W+NRP  RL ++
Subjt:  APRCVKNNKPRFFPVIQPCQVFHSCSVQVHQILGDEDVINRGNFISIAIQLGNISLF-KVSFVKTAFLGLGILPPPSSFSFMLPWKNRPCTRLTSN
TrEMBL top hitse value%identityAlignment
A0A5A7RGD8 F-box family protein8.2e-0533.33Show/hide
Query:  APRCVKNNKPRFFPVIQPCQVFHSCSVQVHQILGDEDVINRGNFISIAIQLGNISLF-KVSFVKTAFLGLGILPPPSSFSFMLPWKNRPCTRLTSN
        APR V +N P   P++   ++ HS   Q + IL  + +  R   +    Q+  +  F  V+ V+   LGL ILPPP +   +L W+NRP  RL ++
Subjt:  APRCVKNNKPRFFPVIQPCQVFHSCSVQVHQILGDEDVINRGNFISIAIQLGNISLF-KVSFVKTAFLGLGILPPPSSFSFMLPWKNRPCTRLTSN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTTGTTGAGAACAAATGTATTGTACTTTTGTTTGTTAAGCTTATAAATGACTTTTACCTGACAGAATTGGCACCAAGGTGCGTAAAGAACAACAAGCCA
CGGTTCTTTCCTGTTATCCAGCCTTGCCAAGTTTTCCATTCCTGTTCTGTTCAGGTTCACCAAATCTTGGGAGATGAAGATGTCATTAACAGGGGGAATTTCATT
TCCATTGCCATTCAACTGGGGAACATCTCCCTGTTTAAGGTTTCCTTTGTGAAGACCGCATTCCTTGGCCTTGGAATCCTCCCACCACCATCTTCCTTCTCTTTC
ATGTTGCCCTGGAAGAACAGGCCTTGTACAAGGCTCACATCCAATTGA
mRNA sequenceShow/hide mRNA sequence
GGATATCTTTCATTCAATCATATGGGATCAAATCTTCGGTTTGAAGTATCAATCACTTTTAATACAGTGGGTCGCACACCAATTGCCAATTTGAATTTAAATTCC
ACAAGTAGAAACGTTTAATTAAAGAGACGTGGGGGAAAACATAAAGGAAAATGGTTCCTCGTTCTATCCCATCTTTGCACAAACGTTAATTAGTACAAACCAAAA
CCTCTACGGGAAAAACTGGTATATATACATCTGCTATATCACAAATGACAAACAAAATCCTATTTTTCATGACCGAATGCTCGCTCTCTGGCTGAAAAAACATGC
CCAAGCTTTGATTTTAATCTCATCTTCCAATCTAACAAAAGATTGGAGCCTCTGCCGGAGATTTTAGCTTCATAGATGGCGCAGCCGAGTGTGATTGAGAATATT
CAGGACTTGAACTTTGCTTCAACGTAGGGCATTCACAAAGGCCATCAACGACTCAACATCCCTCTTCTCAGATGGGTATTTGATTGCTTTAGATGAGTGTTTGGG
GAAGAAGAGTATTGTGGGGAATGAGCCTAACTGCAGCTCTTGTTTGGCGAATTGCTTCTGCTCACCGTCAGCTCTGAACTTCCCAACTTTCACTCCGCTTCCTGC
TAACTTCTCAGCCAATTCAACATATGACCCTTCCATAGCCTGTACAAATTCAATGTCATTTGTTGAGAACAAATGTATTGTACTTTTGTTTGTTAAGCTTATAAA
TGACTTTTACCTGACAGAATTGGCACCAAGGTGCGTAAAGAACAACAAGCCACGGTTCTTTCCTGTTATCCAGCCTTGCCAAGTTTTCCATTCCTGTTCTGTTCA
GGTTCACCAAATCTTGGGAGATGAAGATGTCATTAACAGGGGGAATTTCATTTCCATTGCCATTCAACTGGGGAACATCTCCCTGTTTAAGGTTTCCTTTGTGAA
GACCGCATTCCTTGGCCTTGGAATCCTCCCACCACCATCTTCCTTCTCTTTCATGTTGCCCTGGAAGAACAGGCCTTGTACAAGGCTCACATCCAATTGAGACAT
ATCCTTGAGAATGCAAAGAGTTGACAGGCACATTCATGGTCCGCAAGAAGTTCCATATGTCTTTACCATGGACGTTGGCAACAGGGTTCCACTTAATCAGGCTCC
CAATGCCACCATCCAATCCTTCAAAAACAGGATCAACTTGGACAACAGGAACATCTGATCTAGTTCCAGGAGATTGGTCTTTTCTTTGTCCAGTGATCCAAGCTC
TTAGTCCCTTTAAAGCCCTCCTAAGTGGCCTCACTTTCCTTACTCGGCAGCACTCCTGGTGGCCATCGTCGTAGAATGAAAACAGCCCTTTGTTCCTTACTAAAC
CCTGAACTTCAACAGCATCAGGGAACATATACTCTATATGAATGCCATAATGTTTCTCCACTGCATCAAAGAATTGGTATGTTTCTGAATTCAACCTCCCTGTGT
CTAGACTAAACACTCTAAATGGTCGACCAGTCAAACGAGCATATTCAATCAATGCAACATCTTCCGCACCACTGCAGAGAATAATTCTTGTTAGATGTTTCGTTG
ATACAACAGCATTACAATTTAAAGTTCCAGACATTTGGGACGTAATGTTTGAAAAGCAAACCGAAAGACAATTTAATTAAAGGACAGGATAAACACACACCTGAA
AGCAATCGCAATATCGTCACCAAATTTCTCAAGAGCTTGGTCCATTATTTCCAGAGGGGAAGCATTTTCAAGGTCTCTGGCTAATCCATCGTAGTCCACAATCTC
CGTCTTCTCTGCCACCTCTGCAGATCCATCCCCATTTTTTCACACAATTCCCAGAAATGAAAGCCAATTCATGAAAAAAAAGAAAAAAGAGCCAAAATTACCAGC
AGCAAGAGTGTTCGCCACAAACGGCACAAGCGAATCATCCCGTTTGGATTGCGCATTCATAGGCTTCACCACCGAGCATCCTTTAATTTGTGAATAATTTACTCC
AGAAGATAAAACATGTGGCCGATGCAGCAGCTGAACAGAACCAATTCGCGGAACTGCAAACAGAAATGATATACATACACACAATTTAAGAATTAACAATGTAGT
GAACATACAATGCTTCAAAGAAATCTAAACGAAAAATGTGAAGAATACCTTTAGGCTCAGAGGAGGAATCGGCAAAATGGTGAAAATTAGAAGAAGAAGAAATTG
AAGAAGAAGAAACAGAAAGCGCCATGAAAGACAAACAAAAGAAAGTTGCAGTGTTTGGTTCTCGGTTCGTTTGTAAGTCCGGAGGCAAAACAATGGGAAGGGAAG
ATGAAGATTAAATAAAACGATGGAAGAATGAAGGGGGACGGAATTGAGGGAAGAGGGGAATGCTGGAGATGCTGTCCAAGTGGGGCGCTGTGATTGGAGGAAAGT
CCACCCGCGTCGCCTCATCGTACCGTCACGTAGCCATATTTGACCGAAACAGAATGACATCTCTTACGTGGCGTAGTCTATTTCTAATTTTCTGCATGCAGCTTT
GCTTTTCTACCAATTTTCCGCCTCTAAAATATATTTTATTTTAGATCTTTCTTCTCTTTTTTAGTT
Protein sequenceShow/hide protein sequence
MSFVENKCIVLLFVKLINDFYLTELAPRCVKNNKPRFFPVIQPCQVFHSCSVQVHQILGDEDVINRGNFISIAIQLGNISLFKVSFVKTAFLGLGILPPPSSFSF
MLPWKNRPCTRLTSN