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CmoCh00G000230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh00G000230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionS-protein homolog
Genome locationCmo_Chr00:5371160..5562523
RNA-Seq ExpressionCmoCh00G000230
SyntenyCmoCh00G000230
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1
IPR029485 - Cationic amino acid transporter, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022939175.1 S-protein homolog 1-like [Cucurbita moschata]9.4e-3791.36Show/hide
Query:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF
        VGA V RVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH LLNHGDDYQWNFKVNFWGTTLYWCKLE PH Y++F
Subjt:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF

XP_022939177.1 S-protein homolog 1-like [Cucurbita moschata]9.4e-3791.36Show/hide
Query:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF
        VGA V RVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH LLNHGDDYQWNFKVNFWGTTLYWCKLE PH Y++F
Subjt:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF

XP_022974620.1 S-protein homolog 1-like [Cucurbita maxima]9.4e-3791.36Show/hide
Query:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF
        VGA V RVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH LLNHGDDYQWNFKVNFWGTTLYWCKLE PH Y++F
Subjt:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF

XP_022975020.1 S-protein homolog 1-like [Cucurbita maxima]9.4e-3791.36Show/hide
Query:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF
        VGA V RVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH LLNHGDDYQWNFKVNFWGTTLYWCKLE PH Y++F
Subjt:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF

XP_022975047.1 S-protein homolog 1-like, partial [Cucurbita maxima]9.4e-3791.36Show/hide
Query:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF
        VGA V RVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH LLNHGDDYQWNFKVNFWGTTLYWCKLE PH Y++F
Subjt:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF

TrEMBL top hitse value%identityAlignment
A0A6J1EYX0 S-protein homolog4.5e-3791.36Show/hide
Query:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF
        VGA V RVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH LLNHGDDYQWNFKVNFWGTTLYWCKLE PH Y++F
Subjt:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF

A0A6J1IFH8 S-protein homolog4.5e-3791.36Show/hide
Query:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF
        VGA V RVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH LLNHGDDYQWNFKVNFWGTTLYWCKLE PH Y++F
Subjt:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF

A0A6J1IGE6 S-protein homolog4.5e-3791.36Show/hide
Query:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF
        VGA V RVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH LLNHGDDYQWNFKVNFWGTTLYWCKLE PH Y++F
Subjt:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF

A0A6J1IIX8 S-protein homolog4.5e-3791.36Show/hide
Query:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF
        VGA V RVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH LLNHGDDYQWNFKVNFWGTTLYWCKLE PH Y++F
Subjt:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF

A0A6J1IJV0 S-protein homolog4.5e-3791.36Show/hide
Query:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF
        VGA V RVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH LLNHGDDYQWNFKVNFWGTTLYWCKLE PH Y++F
Subjt:  VGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCKLEMPH-YLNF

SwissProt top hitse value%identityAlignment
O64759 Cationic amino acid transporter 59.8e-1356.67Show/hide
Query:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRT
        V Q + P+VWGVPLVP LP LSIA N+FL+GS+   +F RFG+ T  +L+YY  +GLH T
Subjt:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRT

Q84MA5 Cationic amino acid transporter 16.6e-1770Show/hide
Query:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRT
        V QA+ P++WGVPLVP LP  SIAIN+FLLGSID  SF RF IWT ILLIYY+  GLH T
Subjt:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRT

Q9LZ20 Cationic amino acid transporter 6, chloroplastic5.4e-1145.9Show/hide
Query:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRTN
        V QA+KP +WGVP +P  P +SI +N+FLLGS+D  S+ RFG ++ ++++ Y+F G+H ++
Subjt:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRTN

Q9SHH0 Cationic amino acid transporter 8, vacuolar2.9e-1248.68Show/hide
Query:  WYPIPYGFSQLQSYGSVSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRT
        W+    G + L  Y      + P+VWGVPLVP LP  SIA+NLFL+GS+   +F RF I T ++L+YY+F+GLH T
Subjt:  WYPIPYGFSQLQSYGSVSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRT

Q9SQZ0 Cationic amino acid transporter 7, chloroplastic3.0e-0946.55Show/hide
Query:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLH
        V QA+ P  WGVPL+P  P +SI +N+FLLGS+D  S+ RFG ++ ++++ Y+F  +H
Subjt:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLH

Arabidopsis top hitse value%identityAlignment
AT1G17120.1 cationic amino acid transporter 82.0e-1348.68Show/hide
Query:  WYPIPYGFSQLQSYGSVSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRT
        W+    G + L  Y      + P+VWGVPLVP LP  SIA+NLFL+GS+   +F RF I T ++L+YY+F+GLH T
Subjt:  WYPIPYGFSQLQSYGSVSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRT

AT2G34960.1 cationic amino acid transporter 57.0e-1456.67Show/hide
Query:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRT
        V Q + P+VWGVPLVP LP LSIA N+FL+GS+   +F RFG+ T  +L+YY  +GLH T
Subjt:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRT

AT3G10600.1 cationic amino acid transporter 72.1e-1046.55Show/hide
Query:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLH
        V QA+ P  WGVPL+P  P +SI +N+FLLGS+D  S+ RFG ++ ++++ Y+F  +H
Subjt:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLH

AT4G21120.1 amino acid transporter 14.7e-1870Show/hide
Query:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRT
        V QA+ P++WGVPLVP LP  SIAIN+FLLGSID  SF RF IWT ILLIYY+  GLH T
Subjt:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRT

AT5G04770.1 cationic amino acid transporter 63.8e-1245.9Show/hide
Query:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRTN
        V QA+KP +WGVP +P  P +SI +N+FLLGS+D  S+ RFG ++ ++++ Y+F G+H ++
Subjt:  VSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRTN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGATCGGCTTGGTGGTATCCAATTCCATATGGTTTCTCTCAACTCCAGTCCTATGGCTCGGTGTCACAGGCCAAAAAGCCTCGCGTGTGGGGCGTGCCG
CTCGTCCCGTTGCTGCCTTTACTATCGATTGCCATCAACCTTTTCCTTCTTGGCTCCATCGACAAAGCTTCCTTTGAAAGATTTGGAATCTGGACTGAGATTCTG
TTGATTTACTATATCTTTATTGGATTACATAGAACAAACCCTTTTAATTGGAAACAGTCGTCTAATGAATTCCCTAGGAACTTCTATATTGGGGCTCAGCTTCCA
AGGGTCGTGTTACAATCACCAGGACCTTTTAGATATTACATTCATGTGGTTAACGGGCCAAGCAAACTTGGGTTGCTTGTGCATTGTCAGTCTAAAGACGATGAC
TTGGAGTATCATCGCTTGCTTAATCATGGAGATGTTGGGGCTCAGGTTCCAAGGGTCGCGTTACCACCACCAGGACCTTCTAGATATTACATTCATGTGGTTAAC
GGGCTAAGCAAACTTGGGTTGCTTGTGCATTGTCAGTCTAAAGATGATGACTTGGGGTATCATCGTTTGCTTAATCATGGAGATGATTACCAATGGAACTTCAAA
CGAACCCTTTTAATTGGAAACAGTCTTTTGATGAATTCCTTGGGAACTTCTATAGTAAATGGACTATATAGAATTGTGATCAGTCAAATATTGCAAAGCCCCGTT
GGGGCTCATGTTTCAAGGGTCGCGTTACCACCACCAGGACCTTCTAGATATTACATTCATGTGGTTAACGGGCTAAGCAAACTTGGGCTGCTTGTGCATTGTCAG
TCTAAAGACGATGACTTGGGGTATCATCATTTGCTTAATCATGGAGATGATTACCAATGGAACTTCAAAGTTAACTTTTGGGGAACAACCCTCTATTGGTGCAAA
TTGGAGATGCCACATTACTTGAATTTTGCTGCAATGACCTTTTTTGGATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGATCGGCTTGGTGGTATCCAATTCCATATGGTTTCTCTCAACTCCAGTCCTATGGCTCGGTGTCACAGGCCAAAAAGCCTCGCGTGTGGGGCGTGCCG
CTCGTCCCGTTGCTGCCTTTACTATCGATTGCCATCAACCTTTTCCTTCTTGGCTCCATCGACAAAGCTTCCTTTGAAAGATTTGGAATCTGGACTGAGATTCTG
TTGATTTACTATATCTTTATTGGATTACATAGAACAAACCCTTTTAATTGGAAACAGTCGTCTAATGAATTCCCTAGGAACTTCTATATTGGGGCTCAGCTTCCA
AGGGTCGTGTTACAATCACCAGGACCTTTTAGATATTACATTCATGTGGTTAACGGGCCAAGCAAACTTGGGTTGCTTGTGCATTGTCAGTCTAAAGACGATGAC
TTGGAGTATCATCGCTTGCTTAATCATGGAGATGTTGGGGCTCAGGTTCCAAGGGTCGCGTTACCACCACCAGGACCTTCTAGATATTACATTCATGTGGTTAAC
GGGCTAAGCAAACTTGGGTTGCTTGTGCATTGTCAGTCTAAAGATGATGACTTGGGGTATCATCGTTTGCTTAATCATGGAGATGATTACCAATGGAACTTCAAA
CGAACCCTTTTAATTGGAAACAGTCTTTTGATGAATTCCTTGGGAACTTCTATAGTAAATGGACTATATAGAATTGTGATCAGTCAAATATTGCAAAGCCCCGTT
GGGGCTCATGTTTCAAGGGTCGCGTTACCACCACCAGGACCTTCTAGATATTACATTCATGTGGTTAACGGGCTAAGCAAACTTGGGCTGCTTGTGCATTGTCAG
TCTAAAGACGATGACTTGGGGTATCATCATTTGCTTAATCATGGAGATGATTACCAATGGAACTTCAAAGTTAACTTTTGGGGAACAACCCTCTATTGGTGCAAA
TTGGAGATGCCACATTACTTGAATTTTGCTGCAATGACCTTTTTTGGATTTTAA
Protein sequenceShow/hide protein sequence
MAGSAWWYPIPYGFSQLQSYGSVSQAKKPRVWGVPLVPLLPLLSIAINLFLLGSIDKASFERFGIWTEILLIYYIFIGLHRTNPFNWKQSSNEFPRNFYIGAQLP
RVVLQSPGPFRYYIHVVNGPSKLGLLVHCQSKDDDLEYHRLLNHGDVGAQVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFK
RTLLIGNSLLMNSLGTSIVNGLYRIVISQILQSPVGAHVSRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHHLLNHGDDYQWNFKVNFWGTTLYWCK
LEMPHYLNFAAMTFFGF