; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh00G000360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh00G000360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSplicing factor YJU2
Genome locationCmo_Chr00:6282424..6283644
RNA-Seq ExpressionCmoCh00G000360
SyntenyCmoCh00G000360
Gene Ontology termsGO:0000349 - generation of catalytic spliceosome for first transesterification step (biological process)
GO:0071006 - U2-type catalytic step 1 spliceosome (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR007590 - Saf4/Yju2 protein
IPR043701 - Splicing factor Yju2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583657.1 Splicing factor YJU2, partial [Cucurbita argyrosperma subsp. sororia]2.0e-12197.89Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV   TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWREEDEVSEKEKHKR+AEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
        NNSNNYVKRISDDQFDDSSPSEQPSTN DKTSNINAK
Subjt:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK

KAG7011084.1 Coiled-coil domain-containing protein 94-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-12399.15Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVTYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESG
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVTYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESG
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVTYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESG

Query:  ATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVFNNS
        ATRNFEPWREEDEVSEKEKHKR+AEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVFNNS
Subjt:  ATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVFNNS

Query:  NNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
        NNYVKRISDDQFDDSSPSEQPSTN DKTSNINAK
Subjt:  NNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK

XP_022932207.1 coiled-coil domain-containing protein 94 homolog isoform X1 [Cucurbita moschata]1.8e-12298.73Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV   TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
        NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
Subjt:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK

XP_022932209.1 coiled-coil domain-containing protein 94 homolog isoform X2 [Cucurbita moschata]1.8e-12298.73Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV   TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
        NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
Subjt:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK

XP_023519851.1 coiled-coil domain-containing protein 94 homolog [Cucurbita pepo subsp. pepo]4.0e-12298.31Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV   TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWREEDEVSEKEKHKR+AEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
        NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
Subjt:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK

TrEMBL top hitse value%identityAlignment
A0A0A0KL62 Splicing factor YJU24.9e-11089.87Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+KVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV   TYLGIQ+FRFYFKCTRCSAELTIKTDPQNSDY+V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWREEDE SEKEKHKR+AEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQ+TAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
        NNSN+YV+RISDD+FDD S   Q  TNND  S+  AK
Subjt:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK

A0A6J1EW00 Splicing factor YJU28.6e-12398.73Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV   TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
        NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
Subjt:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK

A0A6J1EWD7 Splicing factor YJU28.6e-12398.73Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV   TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
        NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
Subjt:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK

A0A6J1HNB0 Splicing factor YJU22.9e-11089.03Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+ VRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV   TYLGIQLFRFYFKCTRCSAELTIKTDP+NSDY V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWR+EDE SEKEKHKR+AEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
        NNSNNYV+RISDD+FDD++   Q ST+ND+T +  AK
Subjt:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK

A0A6J1HYT1 Splicing factor YJU22.8e-12197.47Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV   TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWREEDEVSEKEKHKR+AEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK
        NNSNNYV+RISDDQFD SSPSEQPSTNNDKTSNINAK
Subjt:  NNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAK

SwissProt top hitse value%identityAlignment
A8WHR3 Splicing factor YJU22.2e-5146.41Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RKE V    YLG+ +FRFY KCTRC AE+T KTDP+N+DY +
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        E GATRNF+  +  +E  +K + +R  EE+ + MK LENRT DSK EM++L  L E+K +  R A V  + ML   ++    ++++ +EEDE   K ++ 
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRISDDQFDDSSPSEQPSTNN---DKTSNI
              VKR+ D   ++ + + +  +     DK ++I
Subjt:  NNSNNYVKRISDDQFDDSSPSEQPSTNN---DKTSNI

Q54WR5 Splicing factor YJU23.0e-5649.41Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        MGERKV++KYYPPDFDPSK+ +++  +    KV  MLPMSIRCNTCG YI +GTKFN++KE V    YLGI+++RF+ +C +C+AELTIKTDP+NS+Y+ 
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRN+EPW+E DE       K   EE  DAM +LENRTL+SKREM++L AL+E+KS+ SR++ +  + +L    Q    +EK  +EED+ L+KSI F
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSN-------------------NYVKRISDDQFDDSSPSEQPSTNNDKTSNI
        NN N                   N +KRI +D  D    +   S NN    NI
Subjt:  NNSN-------------------NYVKRISDDQFDDSSPSEQPSTNNDKTSNI

Q9BW85 Splicing factor YJU21.7e-5147.21Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RKE V    YLG+ +FRFY KCTRC AE+T KTDP+N+DY +
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        E GATRNF+  +  +E  ++ + +R  EE+ + MK LENRT DSK EM++L  L E+K +  R A V  ++ML   + +  E+ ++ +EEDE    +++ 
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRISDDQFDDSSPSE-QPSTNNDKTS
              +   SD + D+++PS  QP+   + T+
Subjt:  NNSNNYVKRISDDQFDDSSPSE-QPSTNNDKTS

Q9D6J3 Splicing factor YJU22.6e-5247.32Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RKE V    YLG+ +FRFY KCTRC AE+T KTDP+N+DY +
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        E GATRNF+  +  +E  ++ + +R  EE+ + MK LENRT DSK EM++L  L E+K +  R A V  ++ML   + +  + +++ EEEDE    +++ 
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRISDDQFDDSSPSEQP
             + + + D + +D +P  +P
Subjt:  NNSNNYVKRISDDQFDDSSPSEQP

Q9P7C5 Splicing factor YJU22.2e-4344Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQ-----QIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV--TYLGIQLFRFYFKCTRCSAELTIKTDPQNS
        M ERKVLNKY PPD+DPS  P  ++ K Q     ++ VR+M P S+RC+TCG YIYKG KFN+RKE     Y  I + RFY +CTRC+AE+T  TDP+++
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQ-----QIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV--TYLGIQLFRFYFKCTRCSAELTIKTDPQNS

Query:  DYIVESGATRNFEPWREE--DEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA--------AEKEKK
        DY  ESGA+RN+EPW E+   E  E E  +R+     D M+ LE +TLD+KR+M I  ALDE++   +R + V+ID  +  L++ A        ++K K 
Subjt:  DYIVESGATRNFEPWREE--DEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA--------AEKEKK

Query:  LEEEDEALIKSIVFNNSNNYVKRIS
         EEE +   KS+  +     ++R++
Subjt:  LEEEDEALIKSIVFNNSNNYVKRIS

Arabidopsis top hitse value%identityAlignment
AT1G17130.1 Family of unknown function (DUF572)1.3e-9476.07Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        MGERKVLNKYYPPDFDP+KL R+RRPKNQQIKVRMMLPMS+RC TCGNYIYKGTKFNSRKEDV   TYLGIQ+FRFYFKCT+CSAELT+KTDPQNSDYIV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        ESGA+RN+EPWR EDE  +K+K KR AEEMGDAMKSLENRTLDSKREMDI+AALDEMKSMKSRHATVS+D+ML ALQ+T AEK K++EEEDEA+IKSI F
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRIS----DDQFDDSSPSEQPSTNNDK
              ++RI+    DD +DD    + PS   +K
Subjt:  NNSNNYVKRIS----DDQFDDSSPSEQPSTNNDK

AT1G17130.2 Family of unknown function (DUF572)8.3e-9473.86Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV----------TYLGIQLFRFYFKCTRCSAELTIKTDP
        MGERKVLNKYYPPDFDP+KL R+RRPKNQQIKVRMMLPMS+RC TCGNYIYKGTKFNSRKEDV          TYLGIQ+FRFYFKCT+CSAELT+KTDP
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV----------TYLGIQLFRFYFKCTRCSAELTIKTDP

Query:  QNSDYIVESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEA
        QNSDYIVESGA+RN+EPWR EDE  +K+K KR AEEMGDAMKSLENRTLDSKREMDI+AALDEMKSMKSRHATVS+D+ML ALQ+T AEK K++EEEDEA
Subjt:  QNSDYIVESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEA

Query:  LIKSIVFNNSNNYVKRIS----DDQFDDSSPSEQPSTNNDK
        +IKSI F      ++RI+    DD +DD    + PS   +K
Subjt:  LIKSIVFNNSNNYVKRIS----DDQFDDSSPSEQPSTNNDK

AT2G29430.1 Family of unknown function (DUF572)2.5e-1855.26Show/hide
Query:  MMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEP
        + LPM ++CN C N + KGTKF SR EDV   TYLGI++FRF  +CT  S E+  +TDP+N+D+I+ESGATR   P
Subjt:  MMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEP

AT2G32050.1 Family of unknown function (DUF572)1.0e-5954.26Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        MGERK LNKYYPP+FDP ++PR+R+PKNQQ K+R M+P+ IRCNTCGNY+ +GTK N R+E+V   TYLGI++ RFYFKC++C  EL +KTDP+NS Y+ 
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        ESGAT  ++   EE++          AE+ GD M SLE RTL SKRE+D++AALDEMKSMKSR  +VS+DSML  L +   E+E+  +EED ALIKS  F
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NNSNNYVKRISDDQFDDSSPSEQ
               +RI D++ D+   +++
Subjt:  NNSNNYVKRISDDQFDDSSPSEQ

AT3G43250.1 Family of unknown function (DUF572)5.8e-5551.08Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV
        MGERK LNKYYPPDFDP K+ R+++PKNQQ K+R MLP+ +RCNTCGNY+ +GTKFN R+EDV   TYLG+++ RFY KCT+C AELTIKTDP+N  Y V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIV

Query:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF
        ESGA+  +    E+ E  +K+KH+       +A++SLENRT+ SKRE++++A+LDE+KSMKSR A++S+D ML  L +   ++E+ +EE  E LIKSI F
Subjt:  ESGATRNFEPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NN--SNNYVKRISDDQFDDSSPSEQPSTNND
              +  K+ + + FD+    ++     D
Subjt:  NN--SNNYVKRISDDQFDDSSPSEQPSTNND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCATCAAAGCTACCAAGGGTTCGTAGGCCCAAAAACCAGCAAATCAAGGTCCGTATG
ATGCTTCCGATGAGCATCCGATGCAATACTTGTGGTAATTACATATACAAGGGTACCAAGTTCAATTCTCGCAAGGAGGACGTCACATATTTGGGAATTCAACTG
TTTAGATTCTACTTCAAGTGTACTAGATGTTCTGCTGAACTCACCATCAAGACAGACCCCCAAAACTCAGATTATATTGTAGAGTCGGGAGCCACACGTAATTTT
GAACCGTGGCGTGAGGAGGATGAAGTTTCAGAGAAAGAGAAACACAAAAGGAGTGCTGAAGAGATGGGGGATGCAATGAAATCTTTGGAGAATAGAACCTTGGAT
TCTAAACGCGAGATGGACATCCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGTCCAGACACGCAACTGTGAGTATTGATTCAATGCTTTTGGCTTTGCAACAA
ACTGCTGCAGAAAAGGAAAAGAAGTTAGAAGAAGAGGATGAAGCGTTGATAAAATCTATAGTCTTCAACAACTCAAACAATTATGTTAAAAGAATTTCAGATGAT
CAGTTTGATGATAGCAGTCCTTCTGAACAACCTTCAACCAACAATGACAAAACATCCAACATTAATGCTAAGGTAATAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCATCAAAGCTACCAAGGGTTCGTAGGCCCAAAAACCAGCAAATCAAGGTCCGTATG
ATGCTTCCGATGAGCATCCGATGCAATACTTGTGGTAATTACATATACAAGGGTACCAAGTTCAATTCTCGCAAGGAGGACGTCACATATTTGGGAATTCAACTG
TTTAGATTCTACTTCAAGTGTACTAGATGTTCTGCTGAACTCACCATCAAGACAGACCCCCAAAACTCAGATTATATTGTAGAGTCGGGAGCCACACGTAATTTT
GAACCGTGGCGTGAGGAGGATGAAGTTTCAGAGAAAGAGAAACACAAAAGGAGTGCTGAAGAGATGGGGGATGCAATGAAATCTTTGGAGAATAGAACCTTGGAT
TCTAAACGCGAGATGGACATCCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGTCCAGACACGCAACTGTGAGTATTGATTCAATGCTTTTGGCTTTGCAACAA
ACTGCTGCAGAAAAGGAAAAGAAGTTAGAAGAAGAGGATGAAGCGTTGATAAAATCTATAGTCTTCAACAACTCAAACAATTATGTTAAAAGAATTTCAGATGAT
CAGTTTGATGATAGCAGTCCTTCTGAACAACCTTCAACCAACAATGACAAAACATCCAACATTAATGCTAAGGTAATAAAATAG
Protein sequenceShow/hide protein sequence
MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVTYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNF
EPWREEDEVSEKEKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVFNNSNNYVKRISDD
QFDDSSPSEQPSTNNDKTSNINAKVIK