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CmoCh00G000660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh00G000660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBnaAnng36730D protein
Genome locationCmo_Chr00:15378514..15378971
RNA-Seq ExpressionCmoCh00G000660
SyntenyCmoCh00G000660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4279088.1 unnamed protein product [Prunus armeniaca]2.8e-2752.59Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCPHIQHPLSL-----CASSLR----------------VREESCVDPLNI--------
        MKNVAKCDTWCELQ+P NHRVFE KLRP+P  RGH CLGVT RCP I           CASS                  ++   C+  + +        
Subjt:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCPHIQHPLSL-----CASSLR----------------VREESCVDPLNI--------

Query:  VPKDDALDATPGQAGLPAEFKHINKRRKRNLQGFP
        +    A +ATPGQAGLPAEFKHINKRRKRNLQGFP
Subjt:  VPKDDALDATPGQAGLPAEFKHINKRRKRNLQGFP

GEV87049.1 hypothetical protein [Tanacetum cinerariifolium]3.0e-2956.2Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRC--------PHIQHPLSLC-----------------------ASSLRVREESCVDPL
        MKNVAKCDTWCELQ+P NHRVFE KLRP P  RGHVCLGVTHR           I  P + C                        S L  R+ S  +P 
Subjt:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRC--------PHIQHPLSLC-----------------------ASSLRVREESCVDPL

Query:  NIVPKDDALDATPGQAGLPAEFKHINKRRKRNLQGFP
        N +P DDA  ATPGQAGLPAEFKHINKRRKRNLQGFP
Subjt:  NIVPKDDALDATPGQAGLPAEFKHINKRRKRNLQGFP

KAG2666923.1 hypothetical protein I3760_15G088000 [Carya illinoinensis]6.9e-2659.43Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCPHIQHPLSLCASSLRVREESCVDPLNIVPKDDALDATPGQAGLPAEFKHINKRRKR
        MKNVAKCDTWCELQ+PANHRVFE KLRP+P  RGHVCLGVTHRCPH      +                               AGLPAEFKHINKRRKR
Subjt:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCPHIQHPLSLCASSLRVREESCVDPLNIVPKDDALDATPGQAGLPAEFKHINKRRKR

Query:  NLQGFP
        NLQGFP
Subjt:  NLQGFP

KAG8611767.1 hypothetical protein MANES_S026816v8 [Manihot esculenta]8.4e-2448.94Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCP---------------------HIQHPLSLCASSL-------------RVREESCV
        MKN AKCDTWCELQ+PANHRVFE KLRP+PS RGHVCLGVT   P                     H   P +  ++++             R R  +  
Subjt:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCP---------------------HIQHPLSLCASSL-------------RVREESCV

Query:  DPLNIV-PKDDALDATPGQAGLPAEFKHINKRRKRNLQGFP
        DP      + +A  ATPGQAG PAEFKHINKRRKRNL GFP
Subjt:  DPLNIV-PKDDALDATPGQAGLPAEFKHINKRRKRNLQGFP

KAG8611946.1 hypothetical protein MANES_S044716v8 [Manihot esculenta]8.4e-2448.94Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCP---------------------HIQHPLSLCASSL-------------RVREESCV
        MKN AKCDTWCELQ+PANHRVFE KLRP+PS RGHVCLGVT   P                     H   P +  ++++             R R  +  
Subjt:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCP---------------------HIQHPLSLCASSL-------------RVREESCV

Query:  DPLNIV-PKDDALDATPGQAGLPAEFKHINKRRKRNLQGFP
        DP      + +A  ATPGQAG PAEFKHINKRRKRNL GFP
Subjt:  DPLNIV-PKDDALDATPGQAGLPAEFKHINKRRKRNLQGFP

TrEMBL top hitse value%identityAlignment
A0A0J7YM11 Uncharacterized protein7.0e-2450.35Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHR--CPHI----------------------------QHPLSLCASSLRVREESCVDP--
        MKNVAK DTWCEL +P NHRVFE KLRP+P  RGHVCLGVTHR   PHI                            +H +   A        S   P  
Subjt:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHR--CPHI----------------------------QHPLSLCASSLRVREESCVDP--

Query:  ---LNIVPKDDALDATPGQAGLPAEFKHINKRRKRNLQGFP
           L   P      ATPGQAGLPAEFKHINKRRKRNLQGFP
Subjt:  ---LNIVPKDDALDATPGQAGLPAEFKHINKRRKRNLQGFP

A0A2N9IL11 Uncharacterized protein1.1e-1648.6Show/hide
Query:  DPANHRVFEHKLRPEPSDRGHVCLGVTHRCPHIQ---------------HPLSLCASSLRVREESCVDPLNIVPKDDALDATPGQAGLPAEFKHINKRRK
        +P NHRVFE KLRP P  RGHVCLGVTHRCP                   P+ LC+   R    +     ++ P     +ATPGQAGLPAEFKHINKRRK
Subjt:  DPANHRVFEHKLRPEPSDRGHVCLGVTHRCPHIQ---------------HPLSLCASSLRVREESCVDPLNIVPKDDALDATPGQAGLPAEFKHINKRRK

Query:  RNLQGFP
        + L   P
Subjt:  RNLQGFP

A0A6J5UZ50 Uncharacterized protein1.4e-2752.59Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCPHIQHPLSL-----CASSLR----------------VREESCVDPLNI--------
        MKNVAKCDTWCELQ+P NHRVFE KLRP+P  RGH CLGVT RCP I           CASS                  ++   C+  + +        
Subjt:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCPHIQHPLSL-----CASSLR----------------VREESCVDPLNI--------

Query:  VPKDDALDATPGQAGLPAEFKHINKRRKRNLQGFP
        +    A +ATPGQAGLPAEFKHINKRRKRNLQGFP
Subjt:  VPKDDALDATPGQAGLPAEFKHINKRRKRNLQGFP

U5FGY4 Uncharacterized protein7.0e-1684.78Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCPH
        MKNVAKCDTWCELQ+P NHRVFE KLRP P  RGHVCLGVTHR PH
Subjt:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCPH

V4UD02 Uncharacterized protein1.4e-1686.67Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCP
        MKNVAKCDTWCELQ+P NHRVFE KLRP+P  RGHVCLGVTHRCP
Subjt:  MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGGATCCCGCAAACCACCGAGTCTTTGAACACAAGTTGCGCCCGGAGCCTTCTGACCGAGGGCACGTCTG
CCTAGGCGTCACGCATCGCTGCCCCCACATACAACACCCACTTAGCTTGTGTGCCTCCTCTTTGAGAGTGAGGGAGGAATCTTGTGTTGACCCTTTGAACATTGTCCCCA
AAGATGATGCTCTCGACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGGATCCCGCAAACCACCGAGTCTTTGAACACAAGTTGCGCCCGGAGCCTTCTGACCGAGGGCACGTCTG
CCTAGGCGTCACGCATCGCTGCCCCCACATACAACACCCACTTAGCTTGTGTGCCTCCTCTTTGAGAGTGAGGGAGGAATCTTGTGTTGACCCTTTGAACATTGTCCCCA
AAGATGATGCTCTCGACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCTTAG
Protein sequenceShow/hide protein sequence
MKNVAKCDTWCELQDPANHRVFEHKLRPEPSDRGHVCLGVTHRCPHIQHPLSLCASSLRVREESCVDPLNIVPKDDALDATPGQAGLPAEFKHINKRRKRNLQGFP