; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh00G000670 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh00G000670
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationCmo_Chr00:15378997..15379383
RNA-Seq ExpressionCmoCh00G000670
SyntenyCmoCh00G000670
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637537.1 hypothetical protein CSA_017393 [Cucumis sativus]1.6e-6495.31Show/hide
Query:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP
        MPQVDWRTG SPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGS+RNGALTLSGAP
Subjt:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSS
        FQGTCARS AEDASPDYNSN + ARFSS
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSS

XP_022933354.1 uncharacterized protein LOC111440692 [Cucurbita moschata]9.7e-6798.44Show/hide
Query:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP
        MPQVDWRTGL PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGS+RNGALTLSGAP
Subjt:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSS
        FQGTCARSVAEDASPDYNSNAEGARFSS
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSS

XP_022975713.1 uncharacterized protein LOC111475769 [Cucurbita maxima]5.3e-6596.88Show/hide
Query:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP
        MPQVDWRTGL PFHIRLGHI GPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWG IPKQPDSLTAPRGATGS+RNGALTLSGAP
Subjt:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSS
        FQGTCARSVAEDASPDYNSNAEGARFSS
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSS

XP_023520622.1 uncharacterized protein LOC111784033 [Cucurbita pepo subsp. pepo]2.2e-6698.44Show/hide
Query:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP
        MPQVDWRTGLSPFHIRL HIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGS+RNGALTLSGAP
Subjt:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSS
        FQGTCARSVAEDASPDYNSNAEGARFSS
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSS

XP_023552350.1 uncharacterized protein LOC111810043 [Cucurbita pepo subsp. pepo]2.2e-6698.44Show/hide
Query:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP
        MPQVDWRTGLSPFHIRL HIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGS+RNGALTLSGAP
Subjt:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSS
        FQGTCARSVAEDASPDYNSNAEGARFSS
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSS

TrEMBL top hitse value%identityAlignment
A0A0A0KEK9 Uncharacterized protein7.5e-6595.31Show/hide
Query:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP
        MPQVDWRTG SPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGS+RNGALTLSGAP
Subjt:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSS
        FQGTCARS AEDASPDYNSN + ARFSS
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSS

A0A2N9IEW7 Uncharacterized protein7.1e-5590.83Show/hide
Query:  PQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAPF
        P+VD RTG SPFHIR G IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG+NLPPDWGCIPKQPDS TAPRGATGS  NGALTLSGAPF
Subjt:  PQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAPF

Query:  QGTCARSVAEDASPDYNSNA
        QGT ARS AEDASPDYNSNA
Subjt:  QGTCARSVAEDASPDYNSNA

A0A5A7VB87 Putative transmembrane protein1.3e-6495.31Show/hide
Query:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP
        MPQVDWRTG SPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGS+RNGALTLSGAP
Subjt:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSS
        FQGTCARS AEDASPDYNS+ E ARFSS
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSS

A0A6J1EZI8 uncharacterized protein LOC1114406924.7e-6798.44Show/hide
Query:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP
        MPQVDWRTGL PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGS+RNGALTLSGAP
Subjt:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSS
        FQGTCARSVAEDASPDYNSNAEGARFSS
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSS

A0A6J1IK28 uncharacterized protein LOC1114757692.6e-6596.88Show/hide
Query:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP
        MPQVDWRTGL PFHIRLGHI GPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWG IPKQPDSLTAPRGATGS+RNGALTLSGAP
Subjt:  MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAP

Query:  FQGTCARSVAEDASPDYNSNAEGARFSS
        FQGTCARSVAEDASPDYNSNAEGARFSS
Subjt:  FQGTCARSVAEDASPDYNSNAEGARFSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCAAGTCGATTGGCGGACTGGCTTATCACCTTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCACTTCCCTCCCGACAATTTCAAGCACTATTT
GACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGC
TGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCAAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGT
GCCCGGTCCGTCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGAGGGCGCTCGATTCTCAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCCAAGTCGATTGGCGGACTGGCTTATCACCTTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCACTTCCCTCCCGACAATTTCAAGCACTATTT
GACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGC
TGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCAAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGT
GCCCGGTCCGTCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGAGGGCGCTCGATTCTCAAGCTGA
Protein sequenceShow/hide protein sequence
MPQVDWRTGLSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSKRNGALTLSGAPFQGTC
ARSVAEDASPDYNSNAEGARFSS