; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh00G000740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh00G000740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A2
Genome locationCmo_Chr00:15923104..15924317
RNA-Seq ExpressionCmoCh00G000740
SyntenyCmoCh00G000740
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0009536 - plastid (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsIPR036408 - Photosystem I PsaA/PsaB superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1835862.1 unnamed protein product [Ananas comosus var. bracteatus]4.2e-1744.74Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICNL--------
        M L FPRFSQGLAQDPTTR IWFGIATA DF S  D       QN+FAS  F  ++  F ++TS NLF++  +     + QDP +VRPI +         
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICNL--------

Query:  --------GSKVNRKSFYSRECSHHVVIPASREEYVRWNHFLDI-ELTSGLG
                G      S        HV IP SR EYVRWN+FLD+     GLG
Subjt:  --------GSKVNRKSFYSRECSHHVVIPASREEYVRWNHFLDI-ELTSGLG

GFP93245.1 photosystem i p700 chlorophyll a apoprotein a2 [Phtheirospermum japonicum]2.0e-1436.61Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN---------
        M L FPRFSQGLAQDPTTR IWFGIATA DF S  D       QN+FAS  F  ++  F ++TS NLF++  +     + QDP +VRPI +         
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN---------

Query:  --------LGSKVNR--------------------------------------KSFYSRECSHHVVIPASREEYVRWNHFLDI
                +G + N                                       +S  +   S HV IP SR EYVRWN+ LDI
Subjt:  --------LGSKVNR--------------------------------------KSFYSRECSHHVVIPASREEYVRWNHFLDI

KAF8100561.1 hypothetical protein N665_0221s0038 [Sinapis alba]2.1e-1645.14Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICNL--------
        M L FPRFSQGLAQDPTTR IWFGIATA DF S  D       QN+FAS  F  ++  F ++TS NLF++  +     + QDP +VRPI +         
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICNL--------

Query:  --------GSKVNRKSFYSRECSHHVVIPASREEYVRWNHFLDI
                G      S        HV IPASR EYVRWN+FL +
Subjt:  --------GSKVNRKSFYSRECSHHVVIPASREEYVRWNHFLDI

KAG9438620.1 hypothetical protein H6P81_021443 [Aristolochia fimbriata]2.3e-1542.67Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICNLGSKVNRKS
        M L FPRFSQGLAQDPTTR IWFGIATA DF S  D       QN+FAS  F  ++  F ++TS NLF++  +     + QDP + +   ++    N +S
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICNLGSKVNRKS

Query:  FYSRECSH--------------HVVIPASREEYVRWNHFLDI-ELTSGLG
          +   S               HV IP SR +YVRWN+FLD+     GLG
Subjt:  FYSRECSH--------------HVVIPASREEYVRWNHFLDI-ELTSGLG

PHT78034.1 Photosystem I chlorophyll a apoprotein A2 [Capsicum annuum]6.1e-1643.95Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN---------
        M L FPRFSQGLAQDPTTR IWFGIAT  DF S  D       QN+FAS  F  ++  F + TS+NLF++  +     + QDP +VRPI +         
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN---------

Query:  ----------LGSKVN--RKSFYSRECSHHVVIPASREEYVRWNHFLDIEL-TSGLG
                    S VN      Y         IPASR EYVRWN+FLD+ L   GLG
Subjt:  ----------LGSKVN--RKSFYSRECSHHVVIPASREEYVRWNHFLDIEL-TSGLG

TrEMBL top hitse value%identityAlignment
A0A2G2Z7U8 Photosystem I chlorophyll a apoprotein A23.0e-1643.95Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN---------
        M L FPRFSQGLAQDPTTR IWFGIAT  DF S  D       QN+FAS  F  ++  F + TS+NLF++  +     + QDP +VRPI +         
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN---------

Query:  ----------LGSKVN--RKSFYSRECSHHVVIPASREEYVRWNHFLDIEL-TSGLG
                    S VN      Y         IPASR EYVRWN+FLD+ L   GLG
Subjt:  ----------LGSKVN--RKSFYSRECSHHVVIPASREEYVRWNHFLDIEL-TSGLG

A0A2G3CRN4 Photosystem I chlorophyll a apoprotein A21.1e-1341.61Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICNLGSKVNRKS
        M L FPRFSQGLAQDP TR IWFGIATA DF S  D       QN+FAS  F  ++  F ++T  NL ++  +     + QDP +      +G + N+  
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICNLGSKVNRKS

Query:  FYSR-----------ECSH--HVVIPASREEYVRWNHFLDIEL-TSGLG
        +                 H  HV IP SR EY+RWN+FLD+ L   GLG
Subjt:  FYSR-----------ECSH--HVVIPASREEYVRWNHFLDIEL-TSGLG

A0A5N6LUF9 Uncharacterized protein1.4e-1341.25Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICNL--------
        M L FPRFSQGLAQDPTTR I FGIATA DF S  D       QN+FAS  F  ++  F ++TS NLF++  +     + QDP +VRPI +         
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICNL--------

Query:  ---------GSKVNRKSFYS-------------RECSH--HVVIPASREEYVRWNHFLDI
                 G+       YS                 H  HV IPASR EYVRWN+FL++
Subjt:  ---------GSKVNRKSFYS-------------RECSH--HVVIPASREEYVRWNHFLDI

A0A6V7PYA1 Uncharacterized protein2.1e-1744.74Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICNL--------
        M L FPRFSQGLAQDPTTR IWFGIATA DF S  D       QN+FAS  F  ++  F ++TS NLF++  +     + QDP +VRPI +         
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICNL--------

Query:  --------GSKVNRKSFYSRECSHHVVIPASREEYVRWNHFLDI-ELTSGLG
                G      S        HV IP SR EYVRWN+FLD+     GLG
Subjt:  --------GSKVNRKSFYSRECSHHVVIPASREEYVRWNHFLDI-ELTSGLG

M0UB86 DNA-directed RNA polymerase2.1e-1438.12Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPIC----------
        M L FPRFSQGLAQDPTTR IWFGIATA DF S  D       QN+FAS  F  ++  F ++TS NLF++  +     + QDP +VRPI           
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPIC----------

Query:  ---------------------------NLGSKVNR--------KSFYSRECSHHVVIPASREEYVRWNHFLDI-ELTSGLG
                                   N  S++N          S        HV IP SR +YVRWN+FLD+     GLG
Subjt:  ---------------------------NLGSKVNR--------KSFYSRECSHHVVIPASREEYVRWNHFLDI-ELTSGLG

SwissProt top hitse value%identityAlignment
Q33332 Photosystem I P700 chlorophyll a apoprotein A23.5e-1452.75Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN
        M L FPRFSQGLAQDPTTR IWFGIATA DF S  D       QN+FAS  F  ++  F ++TS NLF++  +     + QDP +VRPI +
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN

Q3BAP1 Photosystem I P700 chlorophyll a apoprotein A21.2e-1453.85Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN
        MTL FPRFSQGLAQDPTTR IWFGIATA DF S  D       QN+FAS  F  ++  F ++TS NLF++  +     + QDP +VRPI +
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN

Q3V535 Photosystem I P700 chlorophyll a apoprotein A23.5e-1452.75Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN
        M L FPRFSQGLAQDPTTR IWFGIATA DF S  D       QN+FAS  F  ++  F ++TS NLF++  +     + QDP +VRPI +
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN

Q70Y04 Photosystem I P700 chlorophyll a apoprotein A23.5e-1452.75Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN
        M L FPRFSQGLAQDPTTR IWFGIATA DF S  D       QN+FAS  F  ++  F ++TS NLF++  +     + QDP +VRPI +
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN

Q8S8X5 Photosystem I P700 chlorophyll a apoprotein A23.5e-1452.75Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN
        M L FPRFSQGLAQDPTTR IWFGIATA DF S  D       QN+FAS  F  ++  F ++TS NLF++  +     + QDP +VRPI +
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN

Arabidopsis top hitse value%identityAlignment
ATCG00340.1 Photosystem I, PsaA/PsaB protein4.2e-1552.75Show/hide
Query:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN
        M L FPRFSQGLAQDPTTR IWFGIATA DF S  D       QN+FAS  F  ++  F ++TS NLF++  +     + QDP +VRPI +
Subjt:  MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSD------RQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICN

ATCG00340.1 Photosystem I, PsaA/PsaB protein6.3e-0375Show/hide
Query:  HVVIPASREEYVRWNHFLDI
        HV IPASR EYVRWN+FL++
Subjt:  HVVIPASREEYVRWNHFLDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACTAGGATTTCCAAGATTTAGCCAAGGTTTAGCTCAGGACCCTACTACTCGTGGTATTTGGTTTGGTATTGCTACTGCGCCTGACTTCGCGTCTTTATCAGACAG
ACAGAATCTTTTTGCTTCCTTCACATTTCGGGCAATTAGCAAGAATTTTTCTGTGTATACTTCCAGAAATCTCTTCAATCTTGGTAAGGAAATTTTGAAGCATGGATACA
AGCAAGACCCTTTCAATGTAAGACCTATTTGCAATTTGGGATCCAAGGTCAACCGAAAAAGCTTTTACTCGAGGGAGTGCTCCCACCATGTCGTTATTCCTGCATCCAGG
GAAGAATATGTTCGATGGAATCATTTCTTAGACATAGAACTAACTTCGGGATTGGGACAAAGTATAAAAGATCTTTTAGAAGCACATATTCGAGGGGACAATTGGGGCGT
GGACATAAAGATGAATTATGACAGACAGGAGCTTTTGCTCATGGAGCTATATTCTAGAGATTACAATCCCGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGACACTAGGATTTCCAAGATTTAGCCAAGGTTTAGCTCAGGACCCTACTACTCGTGGTATTTGGTTTGGTATTGCTACTGCGCCTGACTTCGCGTCTTTATCAGACAG
ACAGAATCTTTTTGCTTCCTTCACATTTCGGGCAATTAGCAAGAATTTTTCTGTGTATACTTCCAGAAATCTCTTCAATCTTGGTAAGGAAATTTTGAAGCATGGATACA
AGCAAGACCCTTTCAATGTAAGACCTATTTGCAATTTGGGATCCAAGGTCAACCGAAAAAGCTTTTACTCGAGGGAGTGCTCCCACCATGTCGTTATTCCTGCATCCAGG
GAAGAATATGTTCGATGGAATCATTTCTTAGACATAGAACTAACTTCGGGATTGGGACAAAGTATAAAAGATCTTTTAGAAGCACATATTCGAGGGGACAATTGGGGCGT
GGACATAAAGATGAATTATGACAGACAGGAGCTTTTGCTCATGGAGCTATATTCTAGAGATTACAATCCCGAATAG
Protein sequenceShow/hide protein sequence
MTLGFPRFSQGLAQDPTTRGIWFGIATAPDFASLSDRQNLFASFTFRAISKNFSVYTSRNLFNLGKEILKHGYKQDPFNVRPICNLGSKVNRKSFYSRECSHHVVIPASR
EEYVRWNHFLDIELTSGLGQSIKDLLEAHIRGDNWGVDIKMNYDRQELLLMELYSRDYNPE