; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh00G000800 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh00G000800
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionReverse transcriptase
Genome locationCmo_Chr00:16352224..16353995
RNA-Seq ExpressionCmoCh00G000800
SyntenyCmoCh00G000800
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR023780 - Chromo domain
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]1.8e-24778.93Show/hide
Query:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG
        G SNQAADALSRK +HAA+C+L+H+  S+I G +RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAG
Subjt:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG

Query:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA
        HPGWQRTYAL+KKGYFW NMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSA
Subjt:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA

Query:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST
        E TAQLFFKHVVKL G+P+SI+SDRDGRFIG+FWTELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHF++ARQKNW+QLLDVAQFCFN QTSSST
Subjt:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST

Query:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP
        G+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT +IARAYLEKASK MKKWADKKRRPL+FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGP
Subjt:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP

Query:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE
        VEVLKK+  TSYRVALP WMKI+PVIHVSNLKPYH D +D QRN  TR  IDL QKE K+VEEILA+RVRK  RP R I E+L+KWKNLP EETSWER E
Subjt:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE

Query:  DLNFAATHIARYESRWLTGTST
        DL      I  ++ R LTGTST
Subjt:  DLNFAATHIARYESRWLTGTST

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]3.1e-24778.74Show/hide
Query:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG
        G SNQAADALSRK +HAA+C+L+H+  S+I G +RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAG
Subjt:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG

Query:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA
        HPGWQRTYAL+KKGYFW NMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSA
Subjt:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA

Query:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST
        E TAQLFFKHVVKL G+P+SI+SDRDGRFIG+FWTELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHF++ARQKNW+QLLDVAQFCFN QTSSST
Subjt:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST

Query:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP
        G+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT +IARAYLEKASK MKKWADKKRRPL+FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGP
Subjt:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP

Query:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE
        VEVLKK+  TSYRVALP WMKI+PVIHVSNLKPYH D +D QRN  TR  IDL QKE K+VEEILA+RVR+  RP R I E+L+KWKNLP EETSWER E
Subjt:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE

Query:  DLNFAATHIARYESRWLTGTST
        DL      I  ++ R LTGTST
Subjt:  DLNFAATHIARYESRWLTGTST

KAA0062556.1 reverse transcriptase [Cucumis melo var. makuwa]3.6e-25169.97Show/hide
Query:  MTRGPVLGLVDVTKPFEVETDASDFALG-------------------------------------------------------------------KSNQA
        +  GP+LG+ DVTKPFEVETDASD+ALG                                                                    SNQA
Subjt:  MTRGPVLGLVDVTKPFEVETDASDFALG-------------------------------------------------------------------KSNQA

Query:  ADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQR
        ADALSRK +HAA+C+L+H+  S+I G +RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G+LRKKL+ ECHDTLWAGHPGWQR
Subjt:  ADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQR

Query:  TYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQL
        TYAL+KKGYFW NMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQL
Subjt:  TYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQL

Query:  FFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFE
        FFKHVVKL G+P+SI+SDRDGRFIG+FWTELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHF++ARQKNW+QLLDVAQFCFN QTSSSTG+SPFE
Subjt:  FFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFE

Query:  IVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKK
        IVSGRQP LPH+IDHP+AGKNPQA NFT+EW+QT +IARAYLEKASK MKKW DKKRRPL+FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGPVEVLKK
Subjt:  IVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKK

Query:  IEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAEDLNFAA
        +  TSYRVALP WMKI+PVIHVSNLKPYH D +D QRN  TR  IDL QKE K+VEEILA+RVR+  RP R I E+L+KWKNLP EETSWER EDL    
Subjt:  IEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAEDLNFAA

Query:  THIARYESRWLTGTST
          I  ++ R LTGTST
Subjt:  THIARYESRWLTGTST

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]3.1e-24778.74Show/hide
Query:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG
        G SNQAADALSRK +HAA+C+L+H+  S+I G +RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAG
Subjt:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG

Query:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA
        HPGWQRTYAL+KKGYFW NMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSA
Subjt:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA

Query:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST
        E TAQLFFKHVVKL G+P+SI+SDRDGRFIG+FWTELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHF++ARQKNW+QLLDVAQFCFN QTSSST
Subjt:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST

Query:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP
        G+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT +IARAYLEKASK MKKWADKKRRPL+FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGP
Subjt:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP

Query:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE
        VEVLKK+  TSYRVALP WMKI+PVIHVSNLKPYH D +D QRN  TR  IDL QKE K+VEEILA+RVR+  RP R I E+L+KWKNLP EETSWER E
Subjt:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE

Query:  DLNFAATHIARYESRWLTGTST
        DL      I  ++ R LTGTST
Subjt:  DLNFAATHIARYESRWLTGTST

TYK28713.1 reverse transcriptase [Cucumis melo var. makuwa]3.1e-24778.74Show/hide
Query:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG
        G SNQAADALSRK +HAA+C+L+H+  S+I G +RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAG
Subjt:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG

Query:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA
        HPGWQRTYAL+KKGYFW NMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSA
Subjt:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA

Query:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST
        E TAQLFFKHVVKL G+P+SI+SDRDGRFIG+FWTELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHF++ARQKNW+QLLDVAQFCFN QTSSST
Subjt:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST

Query:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP
        G+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT +IARAYLEKASK MKKWADKKRRPL+FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGP
Subjt:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP

Query:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE
        VEVLKK+  TSYRVALP WMKI+PVIHVSNLKPYH D +D QRN  TR  IDL QKE K+VEEILA+RVR+  RP R I E+L+KWKNLP EETSWER E
Subjt:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE

Query:  DLNFAATHIARYESRWLTGTST
        DL      I  ++ R LTGTST
Subjt:  DLNFAATHIARYESRWLTGTST

TrEMBL top hitse value%identityAlignment
A0A5A7SUK4 Reverse transcriptase8.9e-24878.93Show/hide
Query:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG
        G SNQAADALSRK +HAA+C+L+H+  S+I G +RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAG
Subjt:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG

Query:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA
        HPGWQRTYAL+KKGYFW NMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSA
Subjt:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA

Query:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST
        E TAQLFFKHVVKL G+P+SI+SDRDGRFIG+FWTELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHF++ARQKNW+QLLDVAQFCFN QTSSST
Subjt:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST

Query:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP
        G+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT +IARAYLEKASK MKKWADKKRRPL+FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGP
Subjt:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP

Query:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE
        VEVLKK+  TSYRVALP WMKI+PVIHVSNLKPYH D +D QRN  TR  IDL QKE K+VEEILA+RVRK  RP R I E+L+KWKNLP EETSWER E
Subjt:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE

Query:  DLNFAATHIARYESRWLTGTST
        DL      I  ++ R LTGTST
Subjt:  DLNFAATHIARYESRWLTGTST

A0A5A7UXR6 Reverse transcriptase1.5e-24778.74Show/hide
Query:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG
        G SNQAADALSRK +HAA+C+L+H+  S+I G +RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAG
Subjt:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG

Query:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA
        HPGWQRTYAL+KKGYFW NMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSA
Subjt:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA

Query:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST
        E TAQLFFKHVVKL G+P+SI+SDRDGRFIG+FWTELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHF++ARQKNW+QLLDVAQFCFN QTSSST
Subjt:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST

Query:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP
        G+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT +IARAYLEKASK MKKWADKKRRPL+FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGP
Subjt:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP

Query:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE
        VEVLKK+  TSYRVALP WMKI+PVIHVSNLKPYH D +D QRN  TR  IDL QKE K+VEEILA+RVR+  RP R I E+L+KWKNLP EETSWER E
Subjt:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE

Query:  DLNFAATHIARYESRWLTGTST
        DL      I  ++ R LTGTST
Subjt:  DLNFAATHIARYESRWLTGTST

A0A5A7V814 Reverse transcriptase1.7e-25169.97Show/hide
Query:  MTRGPVLGLVDVTKPFEVETDASDFALG-------------------------------------------------------------------KSNQA
        +  GP+LG+ DVTKPFEVETDASD+ALG                                                                    SNQA
Subjt:  MTRGPVLGLVDVTKPFEVETDASDFALG-------------------------------------------------------------------KSNQA

Query:  ADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQR
        ADALSRK +HAA+C+L+H+  S+I G +RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G+LRKKL+ ECHDTLWAGHPGWQR
Subjt:  ADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQR

Query:  TYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQL
        TYAL+KKGYFW NMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQL
Subjt:  TYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQL

Query:  FFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFE
        FFKHVVKL G+P+SI+SDRDGRFIG+FWTELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHF++ARQKNW+QLLDVAQFCFN QTSSSTG+SPFE
Subjt:  FFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFE

Query:  IVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKK
        IVSGRQP LPH+IDHP+AGKNPQA NFT+EW+QT +IARAYLEKASK MKKW DKKRRPL+FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGPVEVLKK
Subjt:  IVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKK

Query:  IEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAEDLNFAA
        +  TSYRVALP WMKI+PVIHVSNLKPYH D +D QRN  TR  IDL QKE K+VEEILA+RVR+  RP R I E+L+KWKNLP EETSWER EDL    
Subjt:  IEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAEDLNFAA

Query:  THIARYESRWLTGTST
          I  ++ R LTGTST
Subjt:  THIARYESRWLTGTST

A0A5D3BYE6 Reverse transcriptase1.5e-24778.74Show/hide
Query:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG
        G SNQAADALSRK +HAA+C+L+H+  S+I G +RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAG
Subjt:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG

Query:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA
        HPGWQRTYAL+KKGYFW NMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSA
Subjt:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA

Query:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST
        E TAQLFFKHVVKL G+P+SI+SDRDGRFIG+FWTELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHF++ARQKNW+QLLDVAQFCFN QTSSST
Subjt:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST

Query:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP
        G+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT +IARAYLEKASK MKKWADKKRRPL+FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGP
Subjt:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP

Query:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE
        VEVLKK+  TSYRVALP WMKI+PVIHVSNLKPYH D +D QRN  TR  IDL QKE K+VEEILA+RVR+  RP R I E+L+KWKNLP EETSWER E
Subjt:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE

Query:  DLNFAATHIARYESRWLTGTST
        DL      I  ++ R LTGTST
Subjt:  DLNFAATHIARYESRWLTGTST

A0A5D3C4R1 Reverse transcriptase1.5e-24778.74Show/hide
Query:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG
        G SNQAADALSRK +HAA+C+L+H+  S+I G +RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAG
Subjt:  GKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAG

Query:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA
        HPGWQRTYAL+KKGYFW NMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSA
Subjt:  HPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSA

Query:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST
        E TAQLFFKHVVKL G+P+SI+SDRDGRFIG+FWTELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHF++ARQKNW+QLLDVAQFCFN QTSSST
Subjt:  ELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSST

Query:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP
        G+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT +IARAYLEKASK MKKWADKKRRPL+FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGP
Subjt:  GKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGP

Query:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE
        VEVLKK+  TSYRVALP WMKI+PVIHVSNLKPYH D +D QRN  TR  IDL QKE K+VEEILA+RVR+  RP R I E+L+KWKNLP EETSWER E
Subjt:  VEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAE

Query:  DLNFAATHIARYESRWLTGTST
        DL      I  ++ R LTGTST
Subjt:  DLNFAATHIARYESRWLTGTST

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein4.4e-5029.44Show/hide
Query:  GKSNQAADALSR----------KGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLI
        G +N  ADALSR            +  ++  ++ I  S  D     ++ E+ + D     ++            ++  LLI   +++ +P   +L + +I
Subjt:  GKSNQAADALSR----------KGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLI

Query:  QECHDTLWAGHPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYAT
        ++ H+     HPG +    +I + + W+ +R  I +Y + C  CQ +K    K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK A 
Subjt:  QECHDTLWAGHPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYAT

Query:  FIPTPKLCSAELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQF
         +P  K  +AE TA++F + V+   G P  II+D D  F    W +        +  S  Y PQTDGQTER N  +E+ LR         W+  + + Q 
Subjt:  FIPTPKLCSAELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQF

Query:  CFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQVLIKLRPEQIRFRSRK
         +N    S+T  +PFEIV    PAL  +    ++ K  +    ++E  Q     + +L   +  MKK+ D K + + +F+ GD V++K        +S K
Subjt:  CFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQVLIKLRPEQIRFRSRK

Query:  DQRLVRKYEGPVEVLKKIEATSYRVALPAWMK--IHPVIHVSNLKPYHPDPD-----DDQRNATTRLNIDLQQKETKEV
           L   + GP  VL+K    +Y + LP  +K       HVS+L+ Y  + +      D+ +  T L+I L+ K  ++V
Subjt:  DQRLVRKYEGPVEVLKKIEATSYRVALPAWMK--IHPVIHVSNLKPYHPDPD-----DDQRNATTRLNIDLQQKETKEV

P0CT41 Transposon Tf2-12 polyprotein4.4e-5029.44Show/hide
Query:  GKSNQAADALSR----------KGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLI
        G +N  ADALSR            +  ++  ++ I  S  D     ++ E+ + D     ++            ++  LLI   +++ +P   +L + +I
Subjt:  GKSNQAADALSR----------KGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLI

Query:  QECHDTLWAGHPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYAT
        ++ H+     HPG +    +I + + W+ +R  I +Y + C  CQ +K    K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK A 
Subjt:  QECHDTLWAGHPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYAT

Query:  FIPTPKLCSAELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQF
         +P  K  +AE TA++F + V+   G P  II+D D  F    W +        +  S  Y PQTDGQTER N  +E+ LR         W+  + + Q 
Subjt:  FIPTPKLCSAELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQF

Query:  CFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQVLIKLRPEQIRFRSRK
         +N    S+T  +PFEIV    PAL  +    ++ K  +    ++E  Q     + +L   +  MKK+ D K + + +F+ GD V++K        +S K
Subjt:  CFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQVLIKLRPEQIRFRSRK

Query:  DQRLVRKYEGPVEVLKKIEATSYRVALPAWMK--IHPVIHVSNLKPYHPDPD-----DDQRNATTRLNIDLQQKETKEV
           L   + GP  VL+K    +Y + LP  +K       HVS+L+ Y  + +      D+ +  T L+I L+ K  ++V
Subjt:  DQRLVRKYEGPVEVLKKIEATSYRVALPAWMK--IHPVIHVSNLKPYHPDPD-----DDQRNATTRLNIDLQQKETKEV

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein8.8e-5131.1Show/hide
Query:  DFALGKSNQAADALSRK--------------------GKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNR
        ++  G  N  ADA+SR                      K   LC    IH  ++     ++  E +    S +  +EL++    R+ +   D +I   +R
Subjt:  DFALGKSNQAADALSRK--------------------GKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNR

Query:  LYVPRTGELRKKLIQECHD-TLWAGHPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKV-GE
        L VP   + +  +++  HD TL+ GH G   T A I   Y+W  ++  I+QY +TC+ CQ  K  + ++ GLL+PLP+    W  +S+DF+T LP     
Subjt:  LYVPRTGELRKKLIQECHD-TLWAGHPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKV-GE

Query:  YDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFI
         + ILV+VDRFSK A FI T K   A     L F+++    G P +I SDRD R     + EL   LG    +SS+ HPQTDGQ+ER    L   LR ++
Subjt:  YDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFI

Query:  DARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHI-IDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQ
            +NW   L   +F +N   + + GKSPFEI  G  P  P I  D     ++  A    +  K  T   +  LE A   M+   +++R+PL    GD 
Subjt:  DARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHI-IDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQ

Query:  VLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEIL
        VL+        F+     ++ + Y GP  V+KKI   +Y + L +  K H VI+V  LK  +       +  T R+N     +E +E  ++L
Subjt:  VLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEIL

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.5e-5031.85Show/hide
Query:  DFALGKSNQAADALSRK--------------------GKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNR
        ++  G  N  ADA+SR                      K   LC    IH  ++     ++  E +    S +  +EL++    R+ +   D +I   +R
Subjt:  DFALGKSNQAADALSRK--------------------GKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNR

Query:  LYVPRTGELRKKLIQECHD-TLWAGHPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKV-GE
        L VP   + +  +++  HD TL+ GH G   T A I   Y+W  ++  I+QY +TC+ CQ  K  + ++ GLL+PLP+    W  +S+DF+T LP     
Subjt:  LYVPRTGELRKKLIQECHD-TLWAGHPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKV-GE

Query:  YDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFI
         + ILV+VDRFSK A FI T K   A     L F+++    G P +I SDRD R     + EL   LG    +SS+ HPQTDGQ+ER    L   LR + 
Subjt:  YDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFI

Query:  DARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHI-IDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQ
            +NW   L   +F +N   + + GKSPFEI  G  P  P I  D     ++  A    +  K  T   +  LE A   M+   +++R+PL    GD 
Subjt:  DARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHI-IDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQ

Query:  VLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRN
        VL+        F+     ++ + Y GP  V+KKI   +Y + L +  K H VI+V  LK +   PD   +N
Subjt:  VLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIEATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRN

Q9UR07 Transposon Tf2-11 polyprotein4.4e-5029.44Show/hide
Query:  GKSNQAADALSR----------KGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLI
        G +N  ADALSR            +  ++  ++ I  S  D     ++ E+ + D     ++            ++  LLI   +++ +P   +L + +I
Subjt:  GKSNQAADALSR----------KGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLI

Query:  QECHDTLWAGHPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYAT
        ++ H+     HPG +    +I + + W+ +R  I +Y + C  CQ +K    K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK A 
Subjt:  QECHDTLWAGHPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYAT

Query:  FIPTPKLCSAELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQF
         +P  K  +AE TA++F + V+   G P  II+D D  F    W +        +  S  Y PQTDGQTER N  +E+ LR         W+  + + Q 
Subjt:  FIPTPKLCSAELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQF

Query:  CFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQVLIKLRPEQIRFRSRK
         +N    S+T  +PFEIV    PAL  +    ++ K  +    ++E  Q     + +L   +  MKK+ D K + + +F+ GD V++K        +S K
Subjt:  CFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQVLIKLRPEQIRFRSRK

Query:  DQRLVRKYEGPVEVLKKIEATSYRVALPAWMK--IHPVIHVSNLKPYHPDPD-----DDQRNATTRLNIDLQQKETKEV
           L   + GP  VL+K    +Y + LP  +K       HVS+L+ Y  + +      D+ +  T L+I L+ K  ++V
Subjt:  DQRLVRKYEGPVEVLKKIEATSYRVALPAWMK--IHPVIHVSNLKPYHPDPD-----DDQRNATTRLNIDLQQKETKEV

Arabidopsis top hitse value%identityAlignment
AT2G13370.1 chromatin remodeling 59.8e-0538.33Show/hide
Query:  KETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAEDLNFAATHIARYESR
        K+  +VE I+ADR+ K G     + E+L+KW+ L   E +WE+  D+ FA   I  Y++R
Subjt:  KETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAEDLNFAATHIARYESR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGGGGTCCTGTCCTCGGGTTGGTAGACGTCACAAAGCCATTTGAAGTAGAAACCGATGCTTCCGACTTTGCTCTAGGAAAGAGTAATCAAGCAGCCGACGCGCT
GAGTCGGAAGGGCAAACATGCGGCCCTGTGCATGTTATCCCATATTCATTCAAGTAAGATCGATGGATTGATGCGCGACATCATCAAGGAACATTTACACAAAGACCCAT
CGGCCAAAGCTGTTGTCGAACTAGCTAAGGCTGGAAAGACACGACAGTTTTGGGTTGAGGGGGACCTCCTGATAACCAAAGGAAACAGATTGTACGTCCCAAGAACGGGA
GAACTGAGGAAGAAGCTCATTCAGGAATGTCATGATACCTTATGGGCTGGACACCCTGGGTGGCAAAGAACATACGCCCTAATAAAGAAGGGGTACTTCTGGCAAAATAT
GCGAGACGACATCATGCAATACACCAAGACGTGCCTCATCTGCCAACAGGATAAGGTCGAGAAAGCCAAAGTCTCTGGACTCTTGGAACCTCTACCTGTGCCAACAAGAC
CCTGGGAAAGTGTATCTCTGGACTTCATAACACACCTCCCAAAAGTCGGGGAATATGACGCCATCTTGGTCATTGTAGACCGATTCTCCAAATATGCGACATTCATCCCC
ACTCCCAAATTATGCTCGGCGGAACTCACAGCCCAACTGTTTTTCAAACACGTTGTAAAGCTATCGGGCATTCCGTCGAGCATCATCAGTGATAGGGATGGCAGATTCAT
TGGGACATTCTGGACTGAGTTATTCGCTTTCTTGGGAACAACCTTGAACATCTCCTCGAGTTATCACCCTCAAACCGATGGACAGACAGAACGGTTCAATTGCTTGCTCG
AAGAATACTTACGTCACTTCATCGACGCTCGCCAAAAGAACTGGATACAATTGTTAGATGTCGCCCAATTTTGCTTCAATTGTCAAACAAGCTCGTCTACAGGGAAGAGT
CCCTTCGAAATTGTAAGTGGACGACAACCGGCCTTACCCCATATTATTGATCATCCTTATGCAGGAAAAAACCCTCAAGCTCACAACTTTACAAGAGAATGGAAGCAGAC
GACAAATATAGCCCGGGCATATTTAGAGAAGGCTTCCAAGCATATGAAGAAATGGGCGGACAAGAAGCGTCGCCCCCTTCAATTCCGTGCAGGAGATCAAGTCCTTATCA
AGCTGAGACCAGAACAAATCAGATTTCGTAGCCGAAAGGACCAGAGACTAGTTCGTAAATATGAAGGCCCGGTTGAAGTCCTTAAAAAGATCGAGGCTACCTCCTACCGA
GTTGCACTACCCGCATGGATGAAAATCCACCCCGTCATTCATGTGAGCAACTTGAAGCCCTATCACCCTGATCCAGACGACGACCAACGAAATGCAACCACAAGACTGAA
CATCGATCTGCAGCAAAAAGAAACAAAGGAAGTGGAAGAGATCCTAGCCGACAGGGTTAGGAAGATAGGAAGACCTGTACGGACGATTCGTGAATTCCTTATCAAATGGA
AGAATCTCCCTAAAGAGGAAACAAGCTGGGAACGCGCCGAAGATCTGAACTTCGCCGCCACCCACATCGCAAGGTATGAAAGTCGTTGGTTGACAGGGACGTCAACCAAT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAGGGGTCCTGTCCTCGGGTTGGTAGACGTCACAAAGCCATTTGAAGTAGAAACCGATGCTTCCGACTTTGCTCTAGGAAAGAGTAATCAAGCAGCCGACGCGCT
GAGTCGGAAGGGCAAACATGCGGCCCTGTGCATGTTATCCCATATTCATTCAAGTAAGATCGATGGATTGATGCGCGACATCATCAAGGAACATTTACACAAAGACCCAT
CGGCCAAAGCTGTTGTCGAACTAGCTAAGGCTGGAAAGACACGACAGTTTTGGGTTGAGGGGGACCTCCTGATAACCAAAGGAAACAGATTGTACGTCCCAAGAACGGGA
GAACTGAGGAAGAAGCTCATTCAGGAATGTCATGATACCTTATGGGCTGGACACCCTGGGTGGCAAAGAACATACGCCCTAATAAAGAAGGGGTACTTCTGGCAAAATAT
GCGAGACGACATCATGCAATACACCAAGACGTGCCTCATCTGCCAACAGGATAAGGTCGAGAAAGCCAAAGTCTCTGGACTCTTGGAACCTCTACCTGTGCCAACAAGAC
CCTGGGAAAGTGTATCTCTGGACTTCATAACACACCTCCCAAAAGTCGGGGAATATGACGCCATCTTGGTCATTGTAGACCGATTCTCCAAATATGCGACATTCATCCCC
ACTCCCAAATTATGCTCGGCGGAACTCACAGCCCAACTGTTTTTCAAACACGTTGTAAAGCTATCGGGCATTCCGTCGAGCATCATCAGTGATAGGGATGGCAGATTCAT
TGGGACATTCTGGACTGAGTTATTCGCTTTCTTGGGAACAACCTTGAACATCTCCTCGAGTTATCACCCTCAAACCGATGGACAGACAGAACGGTTCAATTGCTTGCTCG
AAGAATACTTACGTCACTTCATCGACGCTCGCCAAAAGAACTGGATACAATTGTTAGATGTCGCCCAATTTTGCTTCAATTGTCAAACAAGCTCGTCTACAGGGAAGAGT
CCCTTCGAAATTGTAAGTGGACGACAACCGGCCTTACCCCATATTATTGATCATCCTTATGCAGGAAAAAACCCTCAAGCTCACAACTTTACAAGAGAATGGAAGCAGAC
GACAAATATAGCCCGGGCATATTTAGAGAAGGCTTCCAAGCATATGAAGAAATGGGCGGACAAGAAGCGTCGCCCCCTTCAATTCCGTGCAGGAGATCAAGTCCTTATCA
AGCTGAGACCAGAACAAATCAGATTTCGTAGCCGAAAGGACCAGAGACTAGTTCGTAAATATGAAGGCCCGGTTGAAGTCCTTAAAAAGATCGAGGCTACCTCCTACCGA
GTTGCACTACCCGCATGGATGAAAATCCACCCCGTCATTCATGTGAGCAACTTGAAGCCCTATCACCCTGATCCAGACGACGACCAACGAAATGCAACCACAAGACTGAA
CATCGATCTGCAGCAAAAAGAAACAAAGGAAGTGGAAGAGATCCTAGCCGACAGGGTTAGGAAGATAGGAAGACCTGTACGGACGATTCGTGAATTCCTTATCAAATGGA
AGAATCTCCCTAAAGAGGAAACAAGCTGGGAACGCGCCGAAGATCTGAACTTCGCCGCCACCCACATCGCAAGGTATGAAAGTCGTTGGTTGACAGGGACGTCAACCAAT
TAG
Protein sequenceShow/hide protein sequence
MTRGPVLGLVDVTKPFEVETDASDFALGKSNQAADALSRKGKHAALCMLSHIHSSKIDGLMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTG
ELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWQNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIP
TPKLCSAELTAQLFFKHVVKLSGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFIDARQKNWIQLLDVAQFCFNCQTSSSTGKS
PFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIEATSYR
VALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRLNIDLQQKETKEVEEILADRVRKIGRPVRTIREFLIKWKNLPKEETSWERAEDLNFAATHIARYESRWLTGTSTN