; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh00G000960 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh00G000960
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionReverse transcriptase
Genome locationCmo_Chr00:17585701..17587389
RNA-Seq ExpressionCmoCh00G000960
SyntenyCmoCh00G000960
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:1901800 - positive regulation of proteasomal protein catabolic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0000502 - proteasome complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0036402 - proteasome-activating ATPase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0008194 - UDP-glycosyltransferase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR041588 - Integrase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR023780 - Chromo domain
IPR016197 - Chromo-like domain superfamily
IPR012337 - Ribonuclease H-like superfamily
IPR001584 - Integrase, catalytic core


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043669.1 pol protein [Cucumis melo var. makuwa]4.5e-24173.37Show/hide
Query:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK
        MRQRRWLELVKDYD +I YHPGKANVV DALSRK  HS+ALITR+  + R+ ERA I V+   V  QLA+LTVQPTLRQRII +Q  DP L +  G  + 
Subjt:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK

Query:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK
             FS SSD GLL++ RLCVP+   ++ E+L EAH+SPF+MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQ+VKAPRQK AGLLQPLSIPEWK
Subjt:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK

Query:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD
        WEN+ MDFI GLP+T +G+TVIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGV VSIVSDRD RFT  FW+GLQ A+GTRLDFSTAFHPQ D
Subjt:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD

Query:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS
        GQTERLNQ+LEDMLRAC L+F +SWDS LHLMEF+YNNS+QATIGMAPFEALYG+ CRSP+CWDEVGE+ L+GPELV+ TNEAVQ IR+RM T QSRQKS
Subjt:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS

Query:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE
        YADVRRK LEFEVGD +FLKVAPMKGVLRF  +GKLSP+F+GPFEILER+GPVAY+LALPP+LS VHDV HVSMLRKY+ DP HV+DYEPL+++E+LSY 
Subjt:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE

Query:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE
        E+PV +LAREVKTLRN+ I  VKVLWRNH  EEA WERED++R +YPEL  E
Subjt:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE

KAA0051357.1 pol protein [Cucumis melo var. makuwa]8.5e-24073.01Show/hide
Query:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK
        MRQRRWLELVKDYD +I YHPGKANVV DALSRK  HS+ALITR+  + R+ ERA IAV+   V  QLA+LTVQPTLRQRII +Q  DP L +  G  + 
Subjt:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK

Query:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK
             FS SSD GL ++GRLCVP+   ++ E+L EAH+SPF+MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQ+VK PRQK AGLLQPLSIPEWK
Subjt:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK

Query:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD
        WEN+ MDFI GLP+T +G+TVIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGV VSIVSDRD RFT  FW+GLQ A+GTRLDFSTAFHPQAD
Subjt:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD

Query:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS
        GQTERLNQ+LEDMLRAC L+F  SWDS LHLMEF+YNNS+QATIGMAPFEALYGK CRSP+CW EVGE+ L+GPELV+ TNEA+Q IR+RM T QSRQKS
Subjt:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS

Query:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE
        YADVRRK LEFE+ D +FLKVAPMKGVLRF  +GKLSP+F+GPFEILER+GPVAY+LALPP+LS VHDV HVSMLRKY+ DP HV+DYEPL+++E+LSY 
Subjt:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE

Query:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE
        E+PV +LAREVKTLRN+ I  VKVLWRNH  EEA WERED++R +YPEL +E
Subjt:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE

KAA0051368.1 pol protein [Cucumis melo var. makuwa]2.9e-24073.01Show/hide
Query:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK
        MRQRRWLELVKDYD +I YHPGKANVV DALSRK  HS+ALITR+  + R+ ERA IAV+   V  QLA+LTVQPTLRQRII +Q  DP L +  G  + 
Subjt:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK

Query:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK
             FS SSD GLL++ RLCVP+   ++ E+L EAH+SPF+MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQ+VKAPRQK AGLLQPLSIPEWK
Subjt:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK

Query:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD
        WEN+ MDFI GLP+T +G+TVIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGV VSIVSDRD RFT  FW+GLQ A+GTRLDFSTAFHPQ D
Subjt:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD

Query:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS
        GQTERLNQ+LEDMLRAC L+F  SWDS LHLMEF+YNNS+QATIGMAPFEALYG+ CRSP+CW EVGE+ L+GPELV+ TNEA+Q IR+RM T QSRQKS
Subjt:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS

Query:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE
        YADVRRK LEFE+GD +FLKVAPMKGVLRF  +GKLSP+F+GPFEILER+GPVAY+LALPP+LS VHDV HVSMLRKY+ DP HV+DYEPL+++E+LSY 
Subjt:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE

Query:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE
        E+PV +LAREVKTLRN+ I  VKVLWRNH  EEA WERED++R +YPEL +E
Subjt:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE

KAA0064005.1 pol protein [Cucumis melo var. makuwa]4.2e-23972.83Show/hide
Query:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK
        MRQRRWLELVKDYD +I YHPGKANVV DALSRK  HS+ALIT +  + R+ ERA IAV+   V  QLA+LTVQPTLRQRII +Q  DP L +  G  + 
Subjt:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK

Query:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK
             FS SSD GLL++GRLCVP+   ++ E+L EAH+SPF+MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQ+VKAPRQK AGLLQPLSIPEWK
Subjt:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK

Query:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD
        WEN+ MDFI GLP+T +G+TVIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGV VSIVSDRD RFT  FW+GLQ A+GTRLDFSTAFHPQ D
Subjt:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD

Query:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS
        GQTERLNQ+LEDMLRAC L+F  SWDS LHLMEF+YNNS+QATIGM PFEALYG+ CRSP+CW EVGE+ L+GPELV+ TNEA+Q IR+RM T QSRQKS
Subjt:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS

Query:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE
        YADVRRK LEFE+GD +FLKVAPMKGVLRF  +GKLSP+F+GPFEILER+GPVAY+LALPP+LS VHDV HVSMLRKY+ DP HV+DYEPL+++E+LSY 
Subjt:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE

Query:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE
        E+PV +LAREVKTLRN+ I  VKVLWRNH  EEA WERED++R  YPEL  E
Subjt:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE

XP_022933231.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111440131 [Cucurbita moschata]2.8e-29193.24Show/hide
Query:  DIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKSPVDGFSKSSDEGLL
        DIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKSPVDGFSKSSDEGLL
Subjt:  DIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKSPVDGFSKSSDEGLL

Query:  YQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWKWENIVMDFIVGLPKT
        YQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWKWENIVMDFIVGLPKT
Subjt:  YQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWKWENIVMDFIVGLPKT

Query:  PKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQADGQTERLNQILEDMLR
        PKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQADGQTERLNQILEDMLR
Subjt:  PKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQADGQTERLNQILEDMLR

Query:  ACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKSYADVRRKSLEFEVGD
        ACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKSYADVRRKSLEFEVGD
Subjt:  ACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKSYADVRRKSLEFEVGD

Query:  PIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYEEKPVRILAREVKTLR
        PIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHV                                     EVKTLR
Subjt:  PIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYEEKPVRILAREVKTLR

Query:  NRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQEFETFEDESSF
        NRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQEFETFEDESSF
Subjt:  NRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQEFETFEDESSF

TrEMBL top hitse value%identityAlignment
A0A5A7TR61 Pol protein2.2e-24173.37Show/hide
Query:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK
        MRQRRWLELVKDYD +I YHPGKANVV DALSRK  HS+ALITR+  + R+ ERA I V+   V  QLA+LTVQPTLRQRII +Q  DP L +  G  + 
Subjt:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK

Query:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK
             FS SSD GLL++ RLCVP+   ++ E+L EAH+SPF+MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQ+VKAPRQK AGLLQPLSIPEWK
Subjt:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK

Query:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD
        WEN+ MDFI GLP+T +G+TVIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGV VSIVSDRD RFT  FW+GLQ A+GTRLDFSTAFHPQ D
Subjt:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD

Query:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS
        GQTERLNQ+LEDMLRAC L+F +SWDS LHLMEF+YNNS+QATIGMAPFEALYG+ CRSP+CWDEVGE+ L+GPELV+ TNEAVQ IR+RM T QSRQKS
Subjt:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS

Query:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE
        YADVRRK LEFEVGD +FLKVAPMKGVLRF  +GKLSP+F+GPFEILER+GPVAY+LALPP+LS VHDV HVSMLRKY+ DP HV+DYEPL+++E+LSY 
Subjt:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE

Query:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE
        E+PV +LAREVKTLRN+ I  VKVLWRNH  EEA WERED++R +YPEL  E
Subjt:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE

A0A5A7U7V9 Reverse transcriptase1.4e-24073.01Show/hide
Query:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK
        MRQRRWLELVKDYD +I YHPGKANVV DALSRK  HS+ALITR+  + R+ ERA IAV+   V  QLA+LTVQPTLRQRII +Q  DP L +  G  + 
Subjt:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK

Query:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK
             FS SSD GLL++ RLCVP+   ++ E+L EAH+SPF+MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQ+VKAPRQK AGLLQPLSIPEWK
Subjt:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK

Query:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD
        WEN+ MDFI GLP+T +G+TVIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGV VSIVSDRD RFT  FW+GLQ A+GTRLDFSTAFHPQ D
Subjt:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD

Query:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS
        GQTERLNQ+LEDMLRAC L+F  SWDS LHLMEF+YNNS+QATIGMAPFEALYG+ CRSP+CW EVGE+ L+GPELV+ TNEA+Q IR+RM T QSRQKS
Subjt:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS

Query:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE
        YADVRRK LEFE+GD +FLKVAPMKGVLRF  +GKLSP+F+GPFEILER+GPVAY+LALPP+LS VHDV HVSMLRKY+ DP HV+DYEPL+++E+LSY 
Subjt:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE

Query:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE
        E+PV +LAREVKTLRN+ I  VKVLWRNH  EEA WERED++R +YPEL +E
Subjt:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE

A0A5A7UAA8 Reverse transcriptase4.1e-24073.01Show/hide
Query:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK
        MRQRRWLELVKDYD +I YHPGKANVV DALSRK  HS+ALITR+  + R+ ERA IAV+   V  QLA+LTVQPTLRQRII +Q  DP L +  G  + 
Subjt:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK

Query:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK
             FS SSD GL ++GRLCVP+   ++ E+L EAH+SPF+MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQ+VK PRQK AGLLQPLSIPEWK
Subjt:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK

Query:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD
        WEN+ MDFI GLP+T +G+TVIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGV VSIVSDRD RFT  FW+GLQ A+GTRLDFSTAFHPQAD
Subjt:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD

Query:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS
        GQTERLNQ+LEDMLRAC L+F  SWDS LHLMEF+YNNS+QATIGMAPFEALYGK CRSP+CW EVGE+ L+GPELV+ TNEA+Q IR+RM T QSRQKS
Subjt:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS

Query:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE
        YADVRRK LEFE+ D +FLKVAPMKGVLRF  +GKLSP+F+GPFEILER+GPVAY+LALPP+LS VHDV HVSMLRKY+ DP HV+DYEPL+++E+LSY 
Subjt:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE

Query:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE
        E+PV +LAREVKTLRN+ I  VKVLWRNH  EEA WERED++R +YPEL +E
Subjt:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE

A0A5A7VDP3 Pol protein2.0e-23972.83Show/hide
Query:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK
        MRQRRWLELVKDYD +I YHPGKANVV DALSRK  HS+ALIT +  + R+ ERA IAV+   V  QLA+LTVQPTLRQRII +Q  DP L +  G  + 
Subjt:  MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDK

Query:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK
             FS SSD GLL++GRLCVP+   ++ E+L EAH+SPF+MHPG TKMYQDLK+ +WW++MKR+VA FVSKCLVCQ+VKAPRQK AGLLQPLSIPEWK
Subjt:  SPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWK

Query:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD
        WEN+ MDFI GLP+T +G+TVIWVVVDRLTKSAHF+PGK TYT   WAQLY+ EIVRLHGV VSIVSDRD RFT  FW+GLQ A+GTRLDFSTAFHPQ D
Subjt:  WENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQAD

Query:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS
        GQTERLNQ+LEDMLRAC L+F  SWDS LHLMEF+YNNS+QATIGM PFEALYG+ CRSP+CW EVGE+ L+GPELV+ TNEA+Q IR+RM T QSRQKS
Subjt:  GQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKS

Query:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE
        YADVRRK LEFE+GD +FLKVAPMKGVLRF  +GKLSP+F+GPFEILER+GPVAY+LALPP+LS VHDV HVSMLRKY+ DP HV+DYEPL+++E+LSY 
Subjt:  YADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYE

Query:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE
        E+PV +LAREVKTLRN+ I  VKVLWRNH  EEA WERED++R  YPEL  E
Subjt:  EKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQE

A0A6J1EYH9 Reverse transcriptase1.3e-29193.24Show/hide
Query:  DIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKSPVDGFSKSSDEGLL
        DIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKSPVDGFSKSSDEGLL
Subjt:  DIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKSPVDGFSKSSDEGLL

Query:  YQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWKWENIVMDFIVGLPKT
        YQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWKWENIVMDFIVGLPKT
Subjt:  YQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWKWENIVMDFIVGLPKT

Query:  PKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQADGQTERLNQILEDMLR
        PKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQADGQTERLNQILEDMLR
Subjt:  PKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQADGQTERLNQILEDMLR

Query:  ACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKSYADVRRKSLEFEVGD
        ACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKSYADVRRKSLEFEVGD
Subjt:  ACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKSYADVRRKSLEFEVGD

Query:  PIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYEEKPVRILAREVKTLR
        PIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHV                                     EVKTLR
Subjt:  PIFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYEEKPVRILAREVKTLR

Query:  NRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQEFETFEDESSF
        NRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQEFETFEDESSF
Subjt:  NRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELVQEFETFEDESSF

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.0e-5428.36Show/hide
Query:  RQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKS
        R  RW   ++D++ +I Y PG AN + DALSR       ++     + ++ E  +I            ++++    + +++     D  L  +L   DK 
Subjt:  RQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKS

Query:  PVDGFSKSSDEGLLYQGR--LCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEW
          +       +GLL   +  + +P    L + I+ + H     +HPG   +   + + F WK +++ +  +V  C  CQ  K+   K  G LQP+   E 
Subjt:  PVDGFSKSSDEGLLYQGR--LCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEW

Query:  KWENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQA
         WE++ MDFI  LP++  GY  ++VVVDR +K A  +P   + T +  A+++ + ++   G    I++D D  FT   W+         + FS  + PQ 
Subjt:  KWENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQA

Query:  DGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQ
        DGQTER NQ +E +LR        +W   + L++ SYNN+  +   M PFE ++      SPL      +K     E  + T +  Q ++  + T+  + 
Subjt:  DGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQ

Query:  KSYADVRRKSL-EFEVGDPIFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGPVAYKLALPPALSGV-HDVLHVSMLRKY
        K Y D++ + + EF+ GD + +K    +    F HK  KL+P F GPF +L++ GP  Y+L LP ++  +     HVS L KY
Subjt:  KSYADVRRKSL-EFEVGDPIFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGPVAYKLALPPALSGV-HDVLHVSMLRKY

P0CT35 Transposon Tf2-2 polyprotein1.0e-5428.36Show/hide
Query:  RQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKS
        R  RW   ++D++ +I Y PG AN + DALSR       ++     + ++ E  +I            ++++    + +++     D  L  +L   DK 
Subjt:  RQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKS

Query:  PVDGFSKSSDEGLLYQGR--LCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEW
          +       +GLL   +  + +P    L + I+ + H     +HPG   +   + + F WK +++ +  +V  C  CQ  K+   K  G LQP+   E 
Subjt:  PVDGFSKSSDEGLLYQGR--LCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEW

Query:  KWENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQA
         WE++ MDFI  LP++  GY  ++VVVDR +K A  +P   + T +  A+++ + ++   G    I++D D  FT   W+         + FS  + PQ 
Subjt:  KWENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQA

Query:  DGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQ
        DGQTER NQ +E +LR        +W   + L++ SYNN+  +   M PFE ++      SPL      +K     E  + T +  Q ++  + T+  + 
Subjt:  DGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQ

Query:  KSYADVRRKSL-EFEVGDPIFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGPVAYKLALPPALSGV-HDVLHVSMLRKY
        K Y D++ + + EF+ GD + +K    +    F HK  KL+P F GPF +L++ GP  Y+L LP ++  +     HVS L KY
Subjt:  KSYADVRRKSL-EFEVGDPIFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGPVAYKLALPPALSGV-HDVLHVSMLRKY

P0CT36 Transposon Tf2-3 polyprotein1.0e-5428.36Show/hide
Query:  RQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKS
        R  RW   ++D++ +I Y PG AN + DALSR       ++     + ++ E  +I            ++++    + +++     D  L  +L   DK 
Subjt:  RQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKS

Query:  PVDGFSKSSDEGLLYQGR--LCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEW
          +       +GLL   +  + +P    L + I+ + H     +HPG   +   + + F WK +++ +  +V  C  CQ  K+   K  G LQP+   E 
Subjt:  PVDGFSKSSDEGLLYQGR--LCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEW

Query:  KWENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQA
         WE++ MDFI  LP++  GY  ++VVVDR +K A  +P   + T +  A+++ + ++   G    I++D D  FT   W+         + FS  + PQ 
Subjt:  KWENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQA

Query:  DGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQ
        DGQTER NQ +E +LR        +W   + L++ SYNN+  +   M PFE ++      SPL      +K     E  + T +  Q ++  + T+  + 
Subjt:  DGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQ

Query:  KSYADVRRKSL-EFEVGDPIFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGPVAYKLALPPALSGV-HDVLHVSMLRKY
        K Y D++ + + EF+ GD + +K    +    F HK  KL+P F GPF +L++ GP  Y+L LP ++  +     HVS L KY
Subjt:  KSYADVRRKSL-EFEVGDPIFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGPVAYKLALPPALSGV-HDVLHVSMLRKY

P0CT41 Transposon Tf2-12 polyprotein1.0e-5428.36Show/hide
Query:  RQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKS
        R  RW   ++D++ +I Y PG AN + DALSR       ++     + ++ E  +I            ++++    + +++     D  L  +L   DK 
Subjt:  RQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKS

Query:  PVDGFSKSSDEGLLYQGR--LCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEW
          +       +GLL   +  + +P    L + I+ + H     +HPG   +   + + F WK +++ +  +V  C  CQ  K+   K  G LQP+   E 
Subjt:  PVDGFSKSSDEGLLYQGR--LCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEW

Query:  KWENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQA
         WE++ MDFI  LP++  GY  ++VVVDR +K A  +P   + T +  A+++ + ++   G    I++D D  FT   W+         + FS  + PQ 
Subjt:  KWENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQA

Query:  DGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQ
        DGQTER NQ +E +LR        +W   + L++ SYNN+  +   M PFE ++      SPL      +K     E  + T +  Q ++  + T+  + 
Subjt:  DGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQ

Query:  KSYADVRRKSL-EFEVGDPIFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGPVAYKLALPPALSGV-HDVLHVSMLRKY
        K Y D++ + + EF+ GD + +K    +    F HK  KL+P F GPF +L++ GP  Y+L LP ++  +     HVS L KY
Subjt:  KSYADVRRKSL-EFEVGDPIFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGPVAYKLALPPALSGV-HDVLHVSMLRKY

Q9UR07 Transposon Tf2-11 polyprotein1.0e-5428.36Show/hide
Query:  RQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKS
        R  RW   ++D++ +I Y PG AN + DALSR       ++     + ++ E  +I            ++++    + +++     D  L  +L   DK 
Subjt:  RQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKS

Query:  PVDGFSKSSDEGLLYQGR--LCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEW
          +       +GLL   +  + +P    L + I+ + H     +HPG   +   + + F WK +++ +  +V  C  CQ  K+   K  G LQP+   E 
Subjt:  PVDGFSKSSDEGLLYQGR--LCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEW

Query:  KWENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQA
         WE++ MDFI  LP++  GY  ++VVVDR +K A  +P   + T +  A+++ + ++   G    I++D D  FT   W+         + FS  + PQ 
Subjt:  KWENIVMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQA

Query:  DGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQ
        DGQTER NQ +E +LR        +W   + L++ SYNN+  +   M PFE ++      SPL      +K     E  + T +  Q ++  + T+  + 
Subjt:  DGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYG-KRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQ

Query:  KSYADVRRKSL-EFEVGDPIFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGPVAYKLALPPALSGV-HDVLHVSMLRKY
        K Y D++ + + EF+ GD + +K    +    F HK  KL+P F GPF +L++ GP  Y+L LP ++  +     HVS L KY
Subjt:  KSYADVRRKSL-EFEVGDPIFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGPVAYKLALPPALSGV-HDVLHVSMLRKY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAGAGAAGGTGGTTAGAATTGGTGAAGGATTATGACGTAGATATCCAGTACCACCCTGGAAAAGCAAATGTGGTTGTAGATGCCTTGAGTAGGAAGACGGTCCA
CTCATCGGCCCTCATTACGAGGGAAGTAAGGGTACAAAGAGAGTTCGAGCGAGCCAACATAGCTGTAGCGACCAAGGGAGTCATAGCACAGCTGGCCCGACTCACTGTAC
AACCTACGCTTAGGCAAAGAATTATTGCCTCCCAACGAGAGGATCCTAACCTACAGAAAGTCCTAGGACAGCTAGACAAAAGTCCAGTAGATGGATTCTCGAAGTCATCA
GATGAAGGACTATTGTATCAGGGACGCTTATGTGTTCCAGCAATAGAAGATTTAAGGAAGGAAATACTGATGGAAGCTCACAACTCACCATTTGCGATGCATCCAGGAGG
TACTAAGATGTACCAAGATTTAAAACAACACTTTTGGTGGAAGAGCATGAAGAGGGATGTGGCCGGGTTTGTGAGCAAGTGCTTAGTTTGTCAAGAAGTGAAAGCTCCAA
GACAAAAGACGGCGGGGTTGTTGCAGCCCCTAAGCATACCGGAGTGGAAGTGGGAAAACATAGTGATGGACTTCATAGTAGGTTTACCCAAAACGCCCAAGGGCTATACA
GTGATTTGGGTAGTTGTCGATAGGTTGACCAAGTCGGCACACTTTCTACCTGGGAAGGTTACATATACAGTTGACAATTGGGCACAACTGTACGTGAAAGAAATAGTAAG
ACTACATGGAGTCCTAGTGTCTATAGTGTCGGATCGGGATCCACGCTTTACGTTAGCGTTTTGGCGCGGACTTCAAAAAGCACTAGGTACCCGCCTCGACTTTAGTACCG
CCTTTCACCCCCAAGCAGATGGACAAACAGAGCGTTTAAACCAAATTCTAGAGGACATGCTACGCGCTTGCGTACTAGATTTTAAGGAAAGTTGGGATTCCAAACTACAC
CTAATGGAATTCTCGTATAACAACAGTTTCCAAGCAACTATTGGAATGGCACCGTTTGAGGCCCTGTACGGGAAACGGTGTAGGTCCCCACTGTGTTGGGACGAGGTAGG
AGAGAAAGAATTAGTAGGACCCGAGTTGGTTCGACTCACCAATGAGGCTGTCCAGATAATTCGAGCGAGGATGCGTACCGATCAAAGTAGACAGAAAAGCTACGCCGATG
TAAGGCGTAAAAGCCTGGAGTTTGAGGTGGGGGACCCAATATTCCTCAAGGTGGCACCTATGAAAGGTGTGTTAAGATTCGGACATAAGGGCAAGTTAAGTCCTAAATTC
ATTGGACCATTCGAGATCCTAGAGCGAGTTGGTCCGGTAGCGTATAAGTTAGCCTTACCTCCAGCCCTCTCAGGAGTACATGATGTACTTCATGTGTCGATGCTGAGGAA
GTACATTATGGATCCTATCCACGTAATAGACTACGAACCACTCCAACTCAATGAAGATCTGAGCTACGAGGAAAAACCAGTAAGAATCTTAGCTAGAGAGGTAAAAACCT
TACGCAACAGGAGTATTGCGTTCGTTAAGGTACTGTGGCGGAATCACCACAGTGAGGAAGCCATGTGGGAGCGTGAGGACGAGATAAGAGAGAAATACCCCGAGTTGGTA
CAAGAGTTTGAGACTTTCGAGGACGAAAGTTCTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGCAGAGAAGGTGGTTAGAATTGGTGAAGGATTATGACGTAGATATCCAGTACCACCCTGGAAAAGCAAATGTGGTTGTAGATGCCTTGAGTAGGAAGACGGTCCA
CTCATCGGCCCTCATTACGAGGGAAGTAAGGGTACAAAGAGAGTTCGAGCGAGCCAACATAGCTGTAGCGACCAAGGGAGTCATAGCACAGCTGGCCCGACTCACTGTAC
AACCTACGCTTAGGCAAAGAATTATTGCCTCCCAACGAGAGGATCCTAACCTACAGAAAGTCCTAGGACAGCTAGACAAAAGTCCAGTAGATGGATTCTCGAAGTCATCA
GATGAAGGACTATTGTATCAGGGACGCTTATGTGTTCCAGCAATAGAAGATTTAAGGAAGGAAATACTGATGGAAGCTCACAACTCACCATTTGCGATGCATCCAGGAGG
TACTAAGATGTACCAAGATTTAAAACAACACTTTTGGTGGAAGAGCATGAAGAGGGATGTGGCCGGGTTTGTGAGCAAGTGCTTAGTTTGTCAAGAAGTGAAAGCTCCAA
GACAAAAGACGGCGGGGTTGTTGCAGCCCCTAAGCATACCGGAGTGGAAGTGGGAAAACATAGTGATGGACTTCATAGTAGGTTTACCCAAAACGCCCAAGGGCTATACA
GTGATTTGGGTAGTTGTCGATAGGTTGACCAAGTCGGCACACTTTCTACCTGGGAAGGTTACATATACAGTTGACAATTGGGCACAACTGTACGTGAAAGAAATAGTAAG
ACTACATGGAGTCCTAGTGTCTATAGTGTCGGATCGGGATCCACGCTTTACGTTAGCGTTTTGGCGCGGACTTCAAAAAGCACTAGGTACCCGCCTCGACTTTAGTACCG
CCTTTCACCCCCAAGCAGATGGACAAACAGAGCGTTTAAACCAAATTCTAGAGGACATGCTACGCGCTTGCGTACTAGATTTTAAGGAAAGTTGGGATTCCAAACTACAC
CTAATGGAATTCTCGTATAACAACAGTTTCCAAGCAACTATTGGAATGGCACCGTTTGAGGCCCTGTACGGGAAACGGTGTAGGTCCCCACTGTGTTGGGACGAGGTAGG
AGAGAAAGAATTAGTAGGACCCGAGTTGGTTCGACTCACCAATGAGGCTGTCCAGATAATTCGAGCGAGGATGCGTACCGATCAAAGTAGACAGAAAAGCTACGCCGATG
TAAGGCGTAAAAGCCTGGAGTTTGAGGTGGGGGACCCAATATTCCTCAAGGTGGCACCTATGAAAGGTGTGTTAAGATTCGGACATAAGGGCAAGTTAAGTCCTAAATTC
ATTGGACCATTCGAGATCCTAGAGCGAGTTGGTCCGGTAGCGTATAAGTTAGCCTTACCTCCAGCCCTCTCAGGAGTACATGATGTACTTCATGTGTCGATGCTGAGGAA
GTACATTATGGATCCTATCCACGTAATAGACTACGAACCACTCCAACTCAATGAAGATCTGAGCTACGAGGAAAAACCAGTAAGAATCTTAGCTAGAGAGGTAAAAACCT
TACGCAACAGGAGTATTGCGTTCGTTAAGGTACTGTGGCGGAATCACCACAGTGAGGAAGCCATGTGGGAGCGTGAGGACGAGATAAGAGAGAAATACCCCGAGTTGGTA
CAAGAGTTTGAGACTTTCGAGGACGAAAGTTCTTTTTAG
Protein sequenceShow/hide protein sequence
MRQRRWLELVKDYDVDIQYHPGKANVVVDALSRKTVHSSALITREVRVQREFERANIAVATKGVIAQLARLTVQPTLRQRIIASQREDPNLQKVLGQLDKSPVDGFSKSS
DEGLLYQGRLCVPAIEDLRKEILMEAHNSPFAMHPGGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQEVKAPRQKTAGLLQPLSIPEWKWENIVMDFIVGLPKTPKGYT
VIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVLVSIVSDRDPRFTLAFWRGLQKALGTRLDFSTAFHPQADGQTERLNQILEDMLRACVLDFKESWDSKLH
LMEFSYNNSFQATIGMAPFEALYGKRCRSPLCWDEVGEKELVGPELVRLTNEAVQIIRARMRTDQSRQKSYADVRRKSLEFEVGDPIFLKVAPMKGVLRFGHKGKLSPKF
IGPFEILERVGPVAYKLALPPALSGVHDVLHVSMLRKYIMDPIHVIDYEPLQLNEDLSYEEKPVRILAREVKTLRNRSIAFVKVLWRNHHSEEAMWEREDEIREKYPELV
QEFETFEDESSF