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CmoCh00G001050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh00G001050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATP synthase subunit alpha, chloroplastic
Genome locationCmo_Chr00:19018654..19019476
RNA-Seq ExpressionCmoCh00G001050
SyntenyCmoCh00G001050
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domainsIPR004100 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
IPR023366 - ATP synthase subunit alpha, N-terminal domain-like superfamily
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR036121 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALO21904.1 AtpA [Cucurbita cordata]2.7e-55100Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

ALO22033.1 AtpA [Cucurbita ecuadorensis]2.7e-55100Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

ALO22114.1 AtpA [Cucurbita ficifolia]2.7e-55100Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

YP_009447520.1 ATP synthase CF1 alpha subunit [Cucurbita moschata]2.7e-55100Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

YP_009505065.1 ATP synthase CF1 alpha subunit [Cucurbita pepo]2.7e-55100Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

TrEMBL top hitse value%identityAlignment
A0A0S2IE22 ATP synthase subunit alpha1.3e-55100Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

A0A0S2IEP2 ATP synthase subunit alpha1.3e-55100Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

A0A0S2IG79 ATP synthase subunit alpha1.3e-55100Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

A0A0S2IH79 ATP synthase subunit alpha1.3e-55100Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

A0A0S2IHI4 ATP synthase subunit alpha1.3e-55100Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

SwissProt top hitse value%identityAlignment
A4GYP3 ATP synthase subunit alpha, chloroplastic9.8e-5694.96Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVT++A+EISNIIRERIEQYNREVKIVNTG VLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGL+IQEGSSVKATG+IAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

B1NWD5 ATP synthase subunit alpha, chloroplastic4.4e-5695.8Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVT++A+EISNIIRERIEQYNREVKIVNTG VLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGL+IQEGSSVKATGRIAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

Q14FH2 ATP synthase subunit alpha, chloroplastic9.8e-5694.96Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVT++A+EISNIIRERIEQYNREVKIVNTG VLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGL+IQEGSSVKATG+IAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

Q3C1H4 ATP synthase subunit alpha, chloroplastic9.8e-5695.8Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVT++A+EISNIIRERIEQYNREVKIVNTG VLQVGDGIARI+GLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

Q49L13 ATP synthase subunit alpha, chloroplastic4.4e-5695.8Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVT++A+EISNIIRERIEQYNREVKIVNTG VLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGL+IQEGSSVKATGRIAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALAKPIDGR
Subjt:  SEAYLGRVINALAKPIDGR

Arabidopsis top hitse value%identityAlignment
AT2G07698.1 ATPase, F1 complex, alpha subunit protein1.2e-2446.09Show/hide
Query:  QANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAY
        +A E++N+   RI  +    ++   G V+ VGDGIA++YGL+E+ AGE+V F  G  G+ALNLE+ NVG+V+ G    I+EG  VK TG I  +P  +A 
Subjt:  QANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAY

Query:  LGRVINALAKPIDGR
        LGRV++A+  PIDG+
Subjt:  LGRVINALAKPIDGR

ATCG00120.1 ATP synthase subunit alpha1.3e-5593.28Show/hide
Query:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV
        MVT++A+EISNIIRERIEQYNREV IVNTG VLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGL+IQEGSSVKATG+IAQIPV
Subjt:  MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPV

Query:  SEAYLGRVINALAKPIDGR
        SEAYLGRVINALA PIDGR
Subjt:  SEAYLGRVINALAKPIDGR

ATMG01190.1 ATP synthase subunit 11.2e-2446.09Show/hide
Query:  QANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAY
        +A E++N+   RI  +    ++   G V+ VGDGIA++YGL+E+ AGE+V F  G  G+ALNLE+ NVG+V+ G    I+EG  VK TG I  +P  +A 
Subjt:  QANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAY

Query:  LGRVINALAKPIDGR
        LGRV++A+  PIDG+
Subjt:  LGRVINALAKPIDGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAACCCTTCAAGCAAATGAAATTAGTAATATTATCCGTGAACGTATTGAGCAATATAATAGAGAAGTAAAAATTGTAAATACCGGTATTGTACTTCAAGTAGGCGA
CGGCATTGCTCGTATTTATGGTCTTGATGAAGTAATGGCAGGTGAATTAGTCGAATTTGAAGAGGGTACTATAGGCATAGCTCTAAATTTAGAATCAAATAATGTTGGTG
TTGTATTAATGGGTGATGGTTTGCTGATACAGGAGGGAAGTTCTGTAAAAGCAACGGGAAGAATTGCTCAGATACCAGTAAGCGAGGCTTATTTAGGTCGTGTTATAAAC
GCCCTGGCTAAACCTATTGATGGCCGAGTTACACCGACCTGTTCAACACTATACTTCGATTCTGCTCTTCGAAAAGGAACATCGGCTCTAACAATTCCGTCGCCGTCTAC
CAAAACAACCGGAAATGTTTCAAAAAAGGTCGGCATACGGCGTACAAAAAGTTCGCGCCCTTCTTTATCTCTAAAAACAGGGTGTCCTAACCACCCAACAGCTATTCCAT
CCCCGTTGTCCATGGAACCCGCTCTGAATAATCCACCTTTTGCGGGATTATTCCCGATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAACCCTTCAAGCAAATGAAATTAGTAATATTATCCGTGAACGTATTGAGCAATATAATAGAGAAGTAAAAATTGTAAATACCGGTATTGTACTTCAAGTAGGCGA
CGGCATTGCTCGTATTTATGGTCTTGATGAAGTAATGGCAGGTGAATTAGTCGAATTTGAAGAGGGTACTATAGGCATAGCTCTAAATTTAGAATCAAATAATGTTGGTG
TTGTATTAATGGGTGATGGTTTGCTGATACAGGAGGGAAGTTCTGTAAAAGCAACGGGAAGAATTGCTCAGATACCAGTAAGCGAGGCTTATTTAGGTCGTGTTATAAAC
GCCCTGGCTAAACCTATTGATGGCCGAGTTACACCGACCTGTTCAACACTATACTTCGATTCTGCTCTTCGAAAAGGAACATCGGCTCTAACAATTCCGTCGCCGTCTAC
CAAAACAACCGGAAATGTTTCAAAAAAGGTCGGCATACGGCGTACAAAAAGTTCGCGCCCTTCTTTATCTCTAAAAACAGGGTGTCCTAACCACCCAACAGCTATTCCAT
CCCCGTTGTCCATGGAACCCGCTCTGAATAATCCACCTTTTGCGGGATTATTCCCGATGTAA
Protein sequenceShow/hide protein sequence
MVTLQANEISNIIRERIEQYNREVKIVNTGIVLQVGDGIARIYGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVIN
ALAKPIDGRVTPTCSTLYFDSALRKGTSALTIPSPSTKTTGNVSKKVGIRRTKSSRPSLSLKTGCPNHPTAIPSPLSMEPALNNPPFAGLFPM