; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh00G001140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh00G001140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpolygalacturonase-like
Genome locationCmo_Chr00:20700194..20706222
RNA-Seq ExpressionCmoCh00G001140
SyntenyCmoCh00G001140
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0015698 - inorganic anion transport (biological process)
GO:0098656 - anion transmembrane transport (biological process)
GO:0005741 - mitochondrial outer membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004650 - polygalacturonase activity (molecular function)
GO:0008308 - voltage-gated anion channel activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022933258.1 polygalacturonase-like [Cucurbita moschata]7.0e-13094.82Show/hide
Query:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
        AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
Subjt:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG

Query:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
        GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
Subjt:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS

Query:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG
        IGPGTSNMWIETIT             IGAEEDGVHNVTVKSSTFTGTQNG
Subjt:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG

XP_022963687.1 polygalacturonase-like [Cucurbita moschata]4.4e-12491.63Show/hide
Query:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
        AAELTFNIITLGAKPDEKTDASP+LQTAWAK CDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDI VLANSSSWI FNHINGLSITG
Subjt:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG

Query:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
        GIIDGQGTPLWNCKHS KSCPIGARSLQINDGKNVNINGLSSINSQLFGI MNRCQNVHM+RVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
Subjt:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS

Query:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG
        IGPGTSNMWIETIT             I AEEDGVHNVTVKSSTFTGTQNG
Subjt:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG

XP_022973234.1 polygalacturonase-like [Cucurbita maxima]1.7e-10478.49Show/hide
Query:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
        AAELTFNII+LGAKPD KTDAS VLQ  WAKACDSS PATIYVP+GIF+VRSV FNGPCKNN ITVLIDGTLVASSDI VLA + SWI F+HI+GLSITG
Subjt:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG

Query:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
        G IDGQGT LWNCKHSGKSCP+GA SLQIND +NVNINGLSSINSQ F I ++ CQNVHMTRVNV AA DSPNTDGIHVQQSSDVTILNS+I NGDDCIS
Subjt:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS

Query:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG
        I PGTSN+W+E+IT             I AEEDGVHNVT+  STFTGTQNG
Subjt:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG

XP_022974795.1 polygalacturonase-like [Cucurbita maxima]2.7e-12189.24Show/hide
Query:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
        AAELTFNI+TLGAKPDEKTDAS VLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAIT+LIDGTLVASSDI VLANSSSWILFNHINGLSITG
Subjt:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG

Query:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
        GIIDGQGTPLWNCKHS KSCPIGARSLQINDGKNVNINGLSSINSQLF I MNRCQNVHMTRVNVLAAGDSPNTDGIHV+QSSDVTILNSNIGNGDDCIS
Subjt:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS

Query:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG
        IGPGTSNMWIE+IT             + AEEDGVHN+TVKSSTFT T+NG
Subjt:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG

XP_023521278.1 polygalacturonase-like [Cucurbita pepo subsp. pepo]2.6e-11687.6Show/hide
Query:  AELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITGG
        AELTFNI+TLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFV SVRFNGPCKNNAIT+LIDGTLVASSDI VLANSSSWILFNHINGLSITGG
Subjt:  AELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITGG

Query:  IIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISI
        IIDGQGT LWNCK SGKSCPIGARS QINDGKNVNINGLSSINSQL GI MNRCQNVHMTRVNVLAAGDSPNT+GIHV Q SDVTILNSNIGNGDDCISI
Subjt:  IIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISI

Query:  GPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG
         P TSNMWIE+IT             I  EEDGVHN+TVKSSTFTGTQNG
Subjt:  GPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG

TrEMBL top hitse value%identityAlignment
A0A6J1F489 polygalacturonase-like3.4e-13094.82Show/hide
Query:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
        AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
Subjt:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG

Query:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
        GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
Subjt:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS

Query:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG
        IGPGTSNMWIETIT             IGAEEDGVHNVTVKSSTFTGTQNG
Subjt:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG

A0A6J1HFX3 polygalacturonase-like2.1e-12491.63Show/hide
Query:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
        AAELTFNIITLGAKPDEKTDASP+LQTAWAK CDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDI VLANSSSWI FNHINGLSITG
Subjt:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG

Query:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
        GIIDGQGTPLWNCKHS KSCPIGARSLQINDGKNVNINGLSSINSQLFGI MNRCQNVHM+RVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
Subjt:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS

Query:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG
        IGPGTSNMWIETIT             I AEEDGVHNVTVKSSTFTGTQNG
Subjt:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG

A0A6J1I843 polygalacturonase-like8.4e-10578.49Show/hide
Query:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
        AAELTFNII+LGAKPD KTDAS VLQ  WAKACDSS PATIYVP+GIF+VRSV FNGPCKNN ITVLIDGTLVASSDI VLA + SWI F+HI+GLSITG
Subjt:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG

Query:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
        G IDGQGT LWNCKHSGKSCP+GA SLQIND +NVNINGLSSINSQ F I ++ CQNVHMTRVNV AA DSPNTDGIHVQQSSDVTILNS+I NGDDCIS
Subjt:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS

Query:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG
        I PGTSN+W+E+IT             I AEEDGVHNVT+  STFTGTQNG
Subjt:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG

A0A6J1IEV2 polygalacturonase-like1.3e-12189.24Show/hide
Query:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
        AAELTFNI+TLGAKPDEKTDAS VLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAIT+LIDGTLVASSDI VLANSSSWILFNHINGLSITG
Subjt:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG

Query:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
        GIIDGQGTPLWNCKHS KSCPIGARSLQINDGKNVNINGLSSINSQLF I MNRCQNVHMTRVNVLAAGDSPNTDGIHV+QSSDVTILNSNIGNGDDCIS
Subjt:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS

Query:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG
        IGPGTSNMWIE+IT             + AEEDGVHN+TVKSSTFT T+NG
Subjt:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG

A0A6J1IHD2 polygalacturonase-like8.4e-10578.49Show/hide
Query:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
        AAELTFNII+LGAKPD KTDAS VLQ  WAKACDSS PATIYVP+GIF+VRSV FNGPCKNN ITVLIDGTLVASSDI VLA + SWI F+HI+GLSITG
Subjt:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG

Query:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
        G IDGQGT LWNCKHSGKSCP+GA SLQIND +NVNINGLSSINSQ F I ++ CQNVHMTRVNV AA DSPNTDGIHVQQSSDVTILNS+I NGDDCIS
Subjt:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS

Query:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG
        I PGTSN+W+E+IT             I AEEDGVHNVT+  STFTGTQNG
Subjt:  IGPGTSNMWIETIT------------WIGAEEDGVHNVTVKSSTFTGTQNG

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438602.6e-5546.99Show/hide
Query:  TFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNG-PCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITGGII
        T N+++ GAKPD   D++     AW  AC S+ P TI VP+G F V ++ F+G  CK   I++ I G++VA  D  ++A+S  WI F  +  +SI GGI+
Subjt:  TFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNG-PCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITGGII

Query:  DGQGTPLWNCKHS-GKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIG
        D QGT LW CK++ G +CP GA+SL  +   N+ I+GL+SINSQ F I ++   NV++  V V A  +SPNTDGIHV+ S  V I NS IG GDDCISIG
Subjt:  DGQGTPLWNCKHS-GKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIG

Query:  PGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG
        PG++N++I+TI         IG+     EE GV NVTV +  F GT NG
Subjt:  PGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG

P26216 Exopolygalacturonase6.3e-4139.6Show/hide
Query:  TFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG-GII
        +F+I  LGA  + KTD++  +Q AWA AC  +   TI +P+G F V  + F GPCK + +T+ +DG L+A++D+    +  +WI    ++ L ITG G +
Subjt:  TFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG-GII

Query:  DGQGTPLWNCKHSGK--SCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISI
        DGQG  +W+     K   C I   SL ++   N  ++G++ +NS+ F + M RC+++ +  V V A GDSPNTDGIH+  SS +TI N+ IG GDDCISI
Subjt:  DGQGTPLWNCKHSGK--SCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISI

Query:  GPGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG
        GPGTS + I  +T        IG+     +E  V ++ VK  T   T  G
Subjt:  GPGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG

P35338 Exopolygalacturonase6.3e-4139.6Show/hide
Query:  TFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG-GII
        +F+I  LGA  + KTD++  +Q AWA AC  +   TI +P+G F V  + F GPCK + +T+ +DG L+A++D+       +WI    ++ L ITG G +
Subjt:  TFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG-GII

Query:  DGQGTPLWNCKHSGK--SCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISI
        DGQG  +W+     K   C I   SL ++   N  ++G++ +NS+ F + M +C+N+ +  V V A GDSPNTDGIH+  SS +TI N+ IG GDDCISI
Subjt:  DGQGTPLWNCKHSGK--SCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISI

Query:  GPGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG
        GPGTS + I  +T        IG+     +E  V ++ VK  T   T  G
Subjt:  GPGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG

P35339 Exopolygalacturonase1.3e-4140Show/hide
Query:  TFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG-GII
        +F+I  LGA  + KTD++  +Q AWA AC  +   TI +P+G F V  + F GPCK + +T+ ++G L+A++D+    +  +WI    ++ L ITG G +
Subjt:  TFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG-GII

Query:  DGQGTPLWNCKHSGK--SCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISI
        DGQG  +W+     K   C I   SL ++   N  ++G++ +NS+ F + M +C+++ +  VNV A GDSPNTDGIH+  SS VTI N+ IG GDDCISI
Subjt:  DGQGTPLWNCKHSGK--SCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISI

Query:  GPGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG
        GPGTS + I  +T        IG+     +E  V ++ VK  T   T NG
Subjt:  GPGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG

P48979 Polygalacturonase4.6e-7657.54Show/hide
Query:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
        A+ LT+N+ +LGAK D KTD++    +AWAKAC S  P  IYVP G FF+R V F+GPCKNNAIT  I GTLVA SD  V+ N+++WI F+H+NG++I+G
Subjt:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG

Query:  GIIDGQGTPLWNCKH-SGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCI
        GI+DGQGT LW CK   G+SCP GA +L  +D  N+ ++GL+S+NSQ+F I +N  QNV M  V V  +G+SPNTDGIHVQ SS VTILNS I  GDDC+
Subjt:  GIIDGQGTPLWNCKH-SGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCI

Query:  SIGPGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG
        SIGPGTSN+WIE +         IG+     EE GV NVTVK+ TF+GTQNG
Subjt:  SIGPGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG

Arabidopsis top hitse value%identityAlignment
AT1G05650.1 Pectin lyase-like superfamily protein1.2e-5844.62Show/hide
Query:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
        +A + FN+++ GAKPD  TD++     AW  AC S+  AT+ VP G F ++ + F GPCK+  IT  + GT+VA  D     NS SWILFN +N  S+ G
Subjt:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG

Query:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
        G  D +G+  W+C+ SG++CP G RS+  N  K+V I+G+ S+NSQ+  + +N C NV +  + ++A GDSPNTDG  VQ S+ VT+  S +  GDDC++
Subjt:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS

Query:  IGPGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG
        IG GT N  I  +         IG+      EDGV NVTV SS FTG+QNG
Subjt:  IGPGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG

AT1G05660.1 Pectin lyase-like superfamily protein3.4e-5844.22Show/hide
Query:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG
        +A   FN+++ GAKPD  TD++     AW  AC S+  AT+ VP+G F ++ + F GPCK+  IT  + GT++A  D     NS  WILFN +N  S+ G
Subjt:  AAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITG

Query:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS
        G  D +    W+C+ SG++CP G RS+  N  K+V I+G+ S+NSQ+  + +N C NV +  V ++A G+SPNTDG HVQ S+ VT   S +  GDDC++
Subjt:  GIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCIS

Query:  IGPGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG
        IGPGT N+ I  +         IG+     +EDGV NVTV SS FTG+QNG
Subjt:  IGPGTSNMWIETITW-------IGA-----EEDGVHNVTVKSSTFTGTQNG

AT2G43870.1 Pectin lyase-like superfamily protein1.3e-6850.4Show/hide
Query:  TFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNG-PCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITGGII
        ++N+++ GAKPD KTDA+      W  AC SS P TI VP+G F +RSV F+G  CK   +T  IDGTLVA +D  V+ N   WI F H++G+++ GG++
Subjt:  TFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNG-PCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITGGII

Query:  DGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIGP
        D +G  LW+CK SGK+CP GA ++      NV ++GL+S+NSQ+F + +N C NV +  V VLAAG+SPNTDGIHVQ SS V+I N+ I  GDDC+SIGP
Subjt:  DGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIGP

Query:  GTSNMWIETITW-------IG-----AEEDGVHNVTVKSSTFTGTQNG
        GT+ +WIE +         IG     + E GV NVTVK+ TFTGT NG
Subjt:  GTSNMWIETITW-------IG-----AEEDGVHNVTVKSSTFTGTQNG

AT2G43890.1 Pectin lyase-like superfamily protein8.4e-5744.09Show/hide
Query:  KREAAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLS
        K   A   +N+++ GAKPD +TD++     AW  AC S+   T+ VP G F ++ V F GPC++  IT  I GT+VA SD   L NS  WILF  +N +S
Subjt:  KREAAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLS

Query:  ITGGIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDD
        I GG +D +G   W C+ SGKSCP+GARS+  N   +V ++GL+SINSQ   + +N C NV + +V ++A   SPNTDG+HVQ S+ VT+ +     GDD
Subjt:  ITGGIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDD

Query:  CISIGPGTSNMWIETITW-------IG-----AEEDGVHNVTVKSSTFTGTQNG
        CISIGPGT N+++  +         IG     A E GV N+T+ +S F+G+ NG
Subjt:  CISIGPGTSNMWIETITW-------IG-----AEEDGVHNVTVKSSTFTGTQNG

AT3G59850.1 Pectin lyase-like superfamily protein1.7e-7052.02Show/hide
Query:  TFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNG-PCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITGGII
        T+NI++ GAKPD KTD++      WAKAC S +P TI VP+G F +RS+ F+G  CK  ++T  I GTLVA SD  V+   + WILF H++G+S+ GG++
Subjt:  TFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNG-PCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSITGGII

Query:  DGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIGP
        D QG  LW+CK SGK+CP GA S+     +NV I+GL+S+NSQ+F + +N C NV +  V V A G+SPNTDGIHVQ SS V+ILNS I  GDDC+SIGP
Subjt:  DGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIGP

Query:  GTSNMWIETITW----------IGAE--EDGVHNVTVKSSTFTGTQNG
        GT+ +WIE +            +G E  E GV N+TVK++TFTGT+NG
Subjt:  GTSNMWIETITW----------IGAE--EDGVHNVTVKSSTFTGTQNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGGTGCAAAAGAGAAGCTGCTGAATTAACATTCAATATTATTACTCTCGGAGCTAAGCCTGATGAAAAGACCGATGCCTCGCCTGTCCTTCAAACGGCA
TGGGCTAAGGCCTGTGACTCATCTGAACCAGCCACTATTTATGTTCCCGAGGGTATATTCTTCGTTCGAAGTGTGAGATTTAATGGGCCTTGTAAGAACAATGCT
ATTACTGTTCTCATTGATGGAACTCTTGTGGCTTCCTCGGACATTCACGTTTTAGCTAATTCTAGTTCTTGGATTTTGTTTAATCACATAAATGGGCTTTCCATT
ACTGGCGGTATTATTGATGGGCAAGGAACTCCCTTATGGAATTGTAAACACTCAGGGAAGAGTTGCCCCATTGGAGCCCGGAGTCTTCAAATAAATGATGGAAAG
AATGTGAACATCAATGGATTATCTTCAATTAACAGCCAATTGTTCGGCATTGGAATGAATCGATGCCAAAACGTGCATATGACAAGAGTGAATGTCTTGGCTGCA
GGCGATAGTCCAAACACTGATGGCATCCACGTGCAACAATCATCAGATGTGACCATCCTCAACTCGAACATTGGAAATGGTGACGACTGCATCTCCATCGGTCCA
GGGACATCCAACATGTGGATCGAAACTATTACATGGATAGGGGCTGAGGAGGATGGAGTGCATAACGTTACCGTGAAATCATCTACATTCACGGGGACCCAGAAT
GGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGGTGCAAAAGAGAAGCTGCTGAATTAACATTCAATATTATTACTCTCGGAGCTAAGCCTGATGAAAAGACCGATGCCTCGCCTGTCCTTCAAACGGCA
TGGGCTAAGGCCTGTGACTCATCTGAACCAGCCACTATTTATGTTCCCGAGGGTATATTCTTCGTTCGAAGTGTGAGATTTAATGGGCCTTGTAAGAACAATGCT
ATTACTGTTCTCATTGATGGAACTCTTGTGGCTTCCTCGGACATTCACGTTTTAGCTAATTCTAGTTCTTGGATTTTGTTTAATCACATAAATGGGCTTTCCATT
ACTGGCGGTATTATTGATGGGCAAGGAACTCCCTTATGGAATTGTAAACACTCAGGGAAGAGTTGCCCCATTGGAGCCCGGAGTCTTCAAATAAATGATGGAAAG
AATGTGAACATCAATGGATTATCTTCAATTAACAGCCAATTGTTCGGCATTGGAATGAATCGATGCCAAAACGTGCATATGACAAGAGTGAATGTCTTGGCTGCA
GGCGATAGTCCAAACACTGATGGCATCCACGTGCAACAATCATCAGATGTGACCATCCTCAACTCGAACATTGGAAATGGTGACGACTGCATCTCCATCGGTCCA
GGGACATCCAACATGTGGATCGAAACTATTACATGGATAGGGGCTGAGGAGGATGGAGTGCATAACGTTACCGTGAAATCATCTACATTCACGGGGACCCAGAAT
GGA
Protein sequenceShow/hide protein sequence
MRRCKREAAELTFNIITLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIHVLANSSSWILFNHINGLSI
TGGIIDGQGTPLWNCKHSGKSCPIGARSLQINDGKNVNINGLSSINSQLFGIGMNRCQNVHMTRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIGP
GTSNMWIETITWIGAEEDGVHNVTVKSSTFTGTQNG