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CmoCh00G001200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh00G001200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111473548
Genome locationCmo_Chr00:20748124..20748916
RNA-Seq ExpressionCmoCh00G001200
SyntenyCmoCh00G001200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011455.1 hypothetical protein SDJN02_26361, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-0946Show/hide
Query:  MKKKIWVQSGALGKYLEN-LENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFEFQSYLYFVSATYLNSGLIKIVFSRAGNVETFNHPYEEIASAFNNSFE
        MKK +W++ GALGKY  + L NIE+     L+K+FLEQS                                KIVFSRAGNV TFN+PY+EIASAFNNS E
Subjt:  MKKKIWVQSGALGKYLEN-LENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFEFQSYLYFVSATYLNSGLIKIVFSRAGNVETFNHPYEEIASAFNNSFE

XP_022932946.1 uncharacterized protein LOC111439562 isoform X1 [Cucurbita moschata]6.9e-1046.94Show/hide
Query:  LENLENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAFNNSFEELPSPY
        +E+LENI IHYY  L  +    + + NQ+ I+  GF+      ++ Y  + +A + +  L   +IVFSR GNV TFN+PYEEI SAFN+SFEEL SPY
Subjt:  LENLENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAFNNSFEELPSPY

XP_022932947.1 uncharacterized protein LOC111439562 isoform X2 [Cucurbita moschata]6.9e-1046.94Show/hide
Query:  LENLENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAFNNSFEELPSPY
        +E+LENI IHYY  L  +    + + NQ+ I+  GF+      ++ Y  + +A + +  L   +IVFSR GNV TFN+PYEEI SAFN+SFEEL SPY
Subjt:  LENLENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAFNNSFEELPSPY

XP_023521277.1 uncharacterized protein LOC111785027 [Cucurbita pepo subsp. pepo]2.5e-1251.02Show/hide
Query:  LENLENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAFNNSFEELPSPY
        +E+LENI IHYY  L  +    +   NQ+ I+  GF+      ++ Y  + +A + +  L   +IVFSRAGNV TFN+PYEEIASAFNNSFEELPSPY
Subjt:  LENLENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAFNNSFEELPSPY

XP_038888566.1 uncharacterized protein LOC120078371 [Benincasa hispida]5.4e-0742.86Show/hide
Query:  LENLENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNS--GLIKIVFSRAGNVETFNHPYEEIASAFNNSFEELPSPY
        +E+LENI IHYY  L  +F  ++ + N++ I+  GF+      ++ Y  + +A + +   G  +IVFSR GNV TF  PYEEI SAFN+SFE   S Y
Subjt:  LENLENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNS--GLIKIVFSRAGNVETFNHPYEEIASAFNNSFEELPSPY

TrEMBL top hitse value%identityAlignment
A0A6J1EXS1 uncharacterized protein LOC111439562 isoform X13.3e-1046.94Show/hide
Query:  LENLENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAFNNSFEELPSPY
        +E+LENI IHYY  L  +    + + NQ+ I+  GF+      ++ Y  + +A + +  L   +IVFSR GNV TFN+PYEEI SAFN+SFEEL SPY
Subjt:  LENLENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAFNNSFEELPSPY

A0A6J1EY68 uncharacterized protein LOC111439562 isoform X23.3e-1046.94Show/hide
Query:  LENLENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAFNNSFEELPSPY
        +E+LENI IHYY  L  +    + + NQ+ I+  GF+      ++ Y  + +A + +  L   +IVFSR GNV TFN+PYEEI SAFN+SFEEL SPY
Subjt:  LENLENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAFNNSFEELPSPY

A0A6J1IB60 uncharacterized protein LOC111473008 isoform X13.8e-0646.67Show/hide
Query:  LENLENIEIHYYW---CLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAF
        +E+LENI IHYY    C  K FL      NQ+ I+  GF       ++ Y  + +A + +  L   +IVFSRAGNV TFN+PYEEIASAF
Subjt:  LENLENIEIHYYW---CLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAF

A0A6J1ICH0 uncharacterized protein LOC111472470 isoform X22.2e-0646.67Show/hide
Query:  LENLENIEIHYYW---CLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAF
        +E+LENI IHYY    C  K FL      NQ+ I+  GF+      ++ Y  + +A + +  L   +IVFSRAGNV TFN+PYEEIASAF
Subjt:  LENLENIEIHYYW---CLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAF

A0A6J1IFX4 uncharacterized protein LOC111472470 isoform X12.2e-0646.67Show/hide
Query:  LENLENIEIHYYW---CLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAF
        +E+LENI IHYY    C  K FL      NQ+ I+  GF+      ++ Y  + +A + +  L   +IVFSRAGNV TFN+PYEEIASAF
Subjt:  LENLENIEIHYYW---CLDKKFLEQSKVKNQTIIIINGFE------FQSYLYFVSATYLNSGL--IKIVFSRAGNVETFNHPYEEIASAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAAAAAATTTGGGTACAGAGTGGAGCACTTGGAAAATATTTGGAGAACTTGGAAAATATTGAAATTCATTATTATTGGTGTTTGGATAAAAAATTTCTTGAACA
ATCAAAGGTAAAAAACCAAACCATTATTATAATAAATGGTTTCGAATTCCAATCTTATTTATATTTTGTTTCAGCAACATACTTGAACTCGGGTTTGATCAAGATTGTGT
TTTCAAGGGCGGGTAACGTGGAAACTTTCAACCATCCATATGAAGAAATAGCTTCAGCATTCAACAACTCCTTTGAAGAATTGCCTTCACCATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAAAAAATTTGGGTACAGAGTGGAGCACTTGGAAAATATTTGGAGAACTTGGAAAATATTGAAATTCATTATTATTGGTGTTTGGATAAAAAATTTCTTGAACA
ATCAAAGGTAAAAAACCAAACCATTATTATAATAAATGGTTTCGAATTCCAATCTTATTTATATTTTGTTTCAGCAACATACTTGAACTCGGGTTTGATCAAGATTGTGT
TTTCAAGGGCGGGTAACGTGGAAACTTTCAACCATCCATATGAAGAAATAGCTTCAGCATTCAACAACTCCTTTGAAGAATTGCCTTCACCATATTGA
Protein sequenceShow/hide protein sequence
MKKKIWVQSGALGKYLENLENIEIHYYWCLDKKFLEQSKVKNQTIIIINGFEFQSYLYFVSATYLNSGLIKIVFSRAGNVETFNHPYEEIASAFNNSFEELPSPY