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CmoCh01G001190 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G001190
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLEA_2 domain-containing protein
Genome locationCmo_Chr01:517385..517744
RNA-Seq ExpressionCmoCh01G001190
SyntenyCmoCh01G001190
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR40256.1 hypothetical protein CICLE_v10026796mg [Citrus clementina]1.8e-1448.42Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV RGY   ++    +    T RWR++WR++K+EK+R+F C  SG+  VHVPY+P TY QNFD G V      DPD  SRSFSARFA+ S + ++
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

GAY51209.1 hypothetical protein CUMW_132530 [Citrus unshiu]8.0e-1548.42Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV+RGY   ++    +    T RWR++WR++K++KKR+F C  SG  +VHVPY+P TY QNFD G V      DPD  SRSFSARFA+ S + ++
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

KAG6606769.1 hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sororia]4.1e-5998.31Show/hide
Query:  MNLSCLRGGGGGIGYVERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAI
        MNLSCLRG GGGIGYVERGYYSAVTVAVLEKTT+RWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAI
Subjt:  MNLSCLRGGGGGIGYVERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAI

Query:  SSAILRRPPPEFVVLKLT
        SSAILRRPPPEFVVLKLT
Subjt:  SSAILRRPPPEFVVLKLT

KAG7036482.1 hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-6099.16Show/hide
Query:  MNLSCLRGGGGGIGYVERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAI
        MNLSCLRG GGGIGYVERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAI
Subjt:  MNLSCLRGGGGGIGYVERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAI

Query:  SSAILRRPPPEFVVLKLTA
        SSAILRRPPPEFVVLKLTA
Subjt:  SSAILRRPPPEFVVLKLTA

KDO51221.1 hypothetical protein CISIN_1g044132mg [Citrus sinensis]6.2e-1549.47Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV+RGY   ++    +    T RWR++WR++K+EKKR+F C  SG+  VHVPY+P TY QNFD G V      DPD  SRSFSARFA+ S + ++
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

TrEMBL top hitse value%identityAlignment
A0A067EJZ4 Uncharacterized protein3.0e-1549.47Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV+RGY   ++    +    T RWR++WR++K+EKKR+F C  SG+  VHVPY+P TY QNFD G V      DPD  SRSFSARFA+ S + ++
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

A0A2H5PFR9 Uncharacterized protein3.9e-1548.42Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV+RGY   ++    +    T RWR++WR++K++KKR+F C  SG  +VHVPY+P TY QNFD G V      DPD  SRSFSARFA+ S + ++
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

A0A5C7IIL3 Uncharacterized protein4.8e-1344.33Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRC--GMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV+ GY   +++   V       WR++WR++K+EKKR+F C    S    VHVPY+P TY QNFD G +      DPD +SRSFSARFA+ S +  +
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRC--GMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

A0A6P3YT23 uncharacterized protein LOC1074047004.8e-1348.48Show/hide
Query:  YVER-GYYSAVTVAVLEKTT-----ARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV R GY S+V+   +  ++      RWR++W ++KKEKKR+F C  S    VH+PY+P TY QNFD GS       DPD +SRSFSARFA+ S IL++
Subjt:  YVER-GYYSAVTVAVLEKTT-----ARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

V4ST02 Uncharacterized protein8.7e-1548.42Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV RGY   ++    +    T RWR++WR++K+EK+R+F C  SG+  VHVPY+P TY QNFD G V      DPD  SRSFSARFA+ S + ++
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGAGTTGCTTAAGGGGCGGCGGCGGCGGGATTGGGTACGTGGAAAGAGGGTACTACTCGGCGGTGACAGTGGCGGTTTTGGAGAAGACGACGGCGAGGTGGAG
AGTGGTGTGGCGGAGGCTGAAGAAGGAGAAGAAGAGAATGTTCAGGTGCGGTATGAGTGGGGCTCGTGAGGTGCACGTGCCGTATAATCCAAAGACGTATTTGCAGAACT
TCGATGATGGGTCTGTGATGATGGTCGGCGACGATGATCCTGACGCGATTAGTCGATCTTTCTCCGCTCGTTTCGCCATTTCCTCCGCCATTTTGCGAAGGCCGCCGCCT
GAGTTTGTGGTTCTGAAACTGACAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTTGAGTTGCTTAAGGGGCGGCGGCGGCGGGATTGGGTACGTGGAAAGAGGGTACTACTCGGCGGTGACAGTGGCGGTTTTGGAGAAGACGACGGCGAGGTGGAG
AGTGGTGTGGCGGAGGCTGAAGAAGGAGAAGAAGAGAATGTTCAGGTGCGGTATGAGTGGGGCTCGTGAGGTGCACGTGCCGTATAATCCAAAGACGTATTTGCAGAACT
TCGATGATGGGTCTGTGATGATGGTCGGCGACGATGATCCTGACGCGATTAGTCGATCTTTCTCCGCTCGTTTCGCCATTTCCTCCGCCATTTTGCGAAGGCCGCCGCCT
GAGTTTGTGGTTCTGAAACTGACAGCATAG
Protein sequenceShow/hide protein sequence
MNLSCLRGGGGGIGYVERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRPPP
EFVVLKLTA