; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G001510 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G001510
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmethyl-CpG-binding domain-containing protein 11-like
Genome locationCmo_Chr01:649563..652324
RNA-Seq ExpressionCmoCh01G001510
SyntenyCmoCh01G001510
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0016798 - hydrolase activity, acting on glycosyl bonds (molecular function)
InterPro domainsIPR001739 - Methyl-CpG DNA binding
IPR016177 - DNA-binding domain superfamily
IPR039622 - Methyl-CpG-binding domain-containing protein 10/11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606799.1 Methyl-CpG-binding domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia]9.5e-16796.95Show/hide
Query:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
        MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
Subjt:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS

Query:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE
        VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGND+A GYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE
Subjt:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE

Query:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN
        FVGKDETDKNGGETDGRGYIEEAEKQGNDV ETVSPNEHTVATEVN+SEKET+QENN PDKD+NDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN
Subjt:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN

Query:  HDVSTNGAAHAEDRSIKDDNMAKENGKL
        HDVSTNGAAHAEDRSI+DDN+AKEN KL
Subjt:  HDVSTNGAAHAEDRSIKDDNMAKENGKL

KAG7036510.1 Methyl-CpG-binding domain-containing protein 10 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-16797.26Show/hide
Query:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
        MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGS AISEFDWSTGEAPRRS
Subjt:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS

Query:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE
        VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGND+AGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE
Subjt:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE

Query:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN
        FVGKDETDKNGGETDGRGYIEEAEKQGNDV ETVSPNEHTVATEVN+SEKET+QENN PDKD+NDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN
Subjt:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN

Query:  HDVSTNGAAHAEDRSIKDDNMAKENGKL
        HDVSTNGAAHAEDRSI+DDN+AKENGKL
Subjt:  HDVSTNGAAHAEDRSIKDDNMAKENGKL

XP_022948683.1 methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata]1.5e-172100Show/hide
Query:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
        MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
Subjt:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS

Query:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE
        VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE
Subjt:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE

Query:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN
        FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN
Subjt:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN

Query:  HDVSTNGAAHAEDRSIKDDNMAKENGKL
        HDVSTNGAAHAEDRSIKDDNMAKENGKL
Subjt:  HDVSTNGAAHAEDRSIKDDNMAKENGKL

XP_022998317.1 methyl-CpG-binding domain-containing protein 11-like [Cucurbita maxima]1.3e-16093.9Show/hide
Query:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
        MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPK+AGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLH GSPAISEFDWSTGEAPRRS
Subjt:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS

Query:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE
        VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVP+VPEEVEMKDAEGNDKAGGYVGEAENGQTEHQ    EMAPE KE EKQVL+GSS+VDVNSE
Subjt:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE

Query:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN
        F GKDETDKNGG+TDGRGYI+EAEKQGNDVAETVSPNEHTVATEVN+SEKETDQENN PDKDDNDPGNV+VLQAKGVVEEEKQNDLNEAAAPEDNE KCN
Subjt:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN

Query:  HDVSTNGAAHAEDRSIKDDNMAKENGKL
        HDVSTNGAAHAEDRSI+DDN+AKENGKL
Subjt:  HDVSTNGAAHAEDRSIKDDNMAKENGKL

XP_023525889.1 methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo]2.3e-16093.96Show/hide
Query:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
        MENKEEAMLI+EDEAQTKSREGVAAMDEVISVELPAPP WKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
Subjt:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS

Query:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE
        VRISEKVKETPPKEEP KKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAG YVGEAENGQTEHQ    EMAPE KE EKQVLKGSS+VDVNSE
Subjt:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE

Query:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDK---DDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA
        FVGKDETDKNGGETDGRGYI+EAEKQGNDVAETVSPNEHTVATEVN+SEKETDQENNNPDK   DDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA
Subjt:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDK---DDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEA

Query:  KCNHDVSTNGAAHAEDRSIKDDNMAKENGKL
        KCNHDVSTNGAAHAEDR+I+D+N+AKENGKL
Subjt:  KCNHDVSTNGAAHAEDRSIKDDNMAKENGKL

TrEMBL top hitse value%identityAlignment
A0A0A0KVG4 MBD domain-containing protein1.7e-8957.85Show/hide
Query:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
        ME+KE  M++  +EAQ    +  A MDEVISVELPAPPTWKKLFIP+R+GTPRK+EIVFIAPTGEEIGNRKLLEQYLK HPG PAISEFDWSTGE PRRS
Subjt:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS

Query:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAE-----------------------------------GNDKAGGYVGEAEN
         RISEKVK TPPKEEPPKKRSRKSS SK++ KEEA+A    PEEVEMKDAE                                   G DK G   GE++N
Subjt:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAE-----------------------------------GNDKAGGYVGEAEN

Query:  GQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYI-------EEAEKQGNDVAETVSPNEH--TVATEVNKSEK-----E
        G TE   ATE + P+VKE EKQ  +G SDV VNSEFV   ET+K+G ET+G+  I       EEAEKQ N++AETV+P+EH   +A+EVN+SEK     E
Subjt:  GQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYI-------EEAEKQGNDVAETVSPNEH--TVATEVNKSEK-----E

Query:  TDQENNNPD--KDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNGA---AHAEDRSIKDDNMAKENGKL
        T QEN++    ++ ND  NV + Q+ GVVE EKQND NEA    DNE K N D+STN A      EDRSI+ D++ KENGKL
Subjt:  TDQENNNPD--KDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNGA---AHAEDRSIKDDNMAKENGKL

A0A1S3BY89 methyl-CpG-binding domain-containing protein 11-like1.2e-8756.92Show/hide
Query:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
        ME+KEE M++  +EAQ  +    AAMDEVISVELPAPPTWKKLFIP+R+GTPRK+EIVFIAPTGEEIGNRKLLEQYLK HPG PAISEFDWSTGE PRRS
Subjt:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS

Query:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAE-------------------------------------------GNDKAG
         RISEKVK TPPKEEPPKKR RKSSGSK++ KEE +A    PEEVEMKDAE                                           G DK G
Subjt:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAE-------------------------------------------GNDKAG

Query:  GYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYI-------EEAEKQGNDVAETVSPNEH--TVATEVNKS
           GE++NG TE   ATE + P+VKE EKQ  +G SDV VNSEFV   ET+K+G ET+G+  I       EEAEKQGN++AE     EH   +A+EVN+S
Subjt:  GYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYI-------EEAEKQGNDVAETVSPNEH--TVATEVNKS

Query:  EK-----ETDQENNNPD--KDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNGA---AHAEDRSIKDDNMAKENGKL
        EK     ET QEN++    ++ ND  NV + Q  GVVE +KQND NEA A  DNE K N DVSTN A      EDRSI+ DN+ KENGKL
Subjt:  EK-----ETDQENNNPD--KDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNGA---AHAEDRSIKDDNMAKENGKL

A0A6J1DJM3 methyl-CpG-binding domain-containing protein 10-like isoform X12.6e-10159.18Show/hide
Query:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
        ME+K E M ++E+EAQT+S  G  AMDE+ISVELPAPPTWKKLFIPK+AGTPRKSEIVFIAPTGEE  NRKLLEQYLK HPGSPA+SEFDWSTGE PRRS
Subjt:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS

Query:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGN-------------------------------------------DKAG
         RISEKVK TPPKEEPP+KRSRKSSGSKKD KEEADA PKVPEE+EMKDAEGN                                           DK G
Subjt:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGN-------------------------------------------DKAG

Query:  GYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYI-------EEAEKQGNDVAETVSPNEHTVATEVNKSEK
           GE ENGQTE +AATEE  PEVKE EKQ LK SSD+DVN   VG DET KNGG+T+G+  I       EE EKQGN+VAE V+P E TVA+EVN+ EK
Subjt:  GYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYI-------EEAEKQGNDVAETVSPNEHTVATEVNKSEK

Query:  -----ETDQENNNP--------DKDDNDPGNVVVLQAKGVVEEEKQNDLNE-AAAPEDNEAKCNHDVSTNGA----------------------AHAEDR
             E +Q N++P        DK +NDPG VV+ QA GVVEEEKQ+D NE  AA  D EA+ N DVSTNGA                        AEDR
Subjt:  -----ETDQENNNP--------DKDDNDPGNVVVLQAKGVVEEEKQNDLNE-AAAPEDNEAKCNHDVSTNGA----------------------AHAEDR

Query:  SIKDDNMAKENGKL
        SI+ DN+ KENGKL
Subjt:  SIKDDNMAKENGKL

A0A6J1GA01 methyl-CpG-binding domain-containing protein 11-like7.3e-173100Show/hide
Query:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
        MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
Subjt:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS

Query:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE
        VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE
Subjt:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE

Query:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN
        FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN
Subjt:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN

Query:  HDVSTNGAAHAEDRSIKDDNMAKENGKL
        HDVSTNGAAHAEDRSIKDDNMAKENGKL
Subjt:  HDVSTNGAAHAEDRSIKDDNMAKENGKL

A0A6J1K7L8 methyl-CpG-binding domain-containing protein 11-like6.5e-16193.9Show/hide
Query:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS
        MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPK+AGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLH GSPAISEFDWSTGEAPRRS
Subjt:  MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRS

Query:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE
        VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVP+VPEEVEMKDAEGNDKAGGYVGEAENGQTEHQ    EMAPE KE EKQVL+GSS+VDVNSE
Subjt:  VRISEKVKETPPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSE

Query:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN
        F GKDETDKNGG+TDGRGYI+EAEKQGNDVAETVSPNEHTVATEVN+SEKETDQENN PDKDDNDPGNV+VLQAKGVVEEEKQNDLNEAAAPEDNE KCN
Subjt:  FVGKDETDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCN

Query:  HDVSTNGAAHAEDRSIKDDNMAKENGKL
        HDVSTNGAAHAEDRSI+DDN+AKENGKL
Subjt:  HDVSTNGAAHAEDRSIKDDNMAKENGKL

SwissProt top hitse value%identityAlignment
Q9LW00 Methyl-CpG-binding domain-containing protein 111.3e-3343.43Show/hide
Query:  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETP-PKEEPPKKRSR-KS
        +EV+SVELPAP +WKKLF P + G+ +K+E+VF+APTGEEI NRK LEQYLK HPG+PAI+EFDW+T   PRRS RISEK K TP P +EPPKKR R KS
Subjt:  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETP-PKEEPPKKRSR-KS

Query:  SGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAEN-------GQTEH---------QAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDE--
          SKKD + E  +     E   +KD E N   G  + E EN       G+TE             T   AP  +E E    K    VD  S+   K++  
Subjt:  SGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAEN-------GQTEH---------QAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDE--

Query:  --TDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQE
           +KN  + + +  +E ++++ N  AET +  E+ + TE    EK  + E
Subjt:  --TDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQE

Q9XI36 Methyl-CpG-binding domain-containing protein 101.0e-3341.03Show/hide
Query:  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVK-ETPPKEEPPKKRSRKSS
        DE++S+ELPAP +WKKLF PKRAGTPRK+EIVF+APTGEEI +RK LEQYLK HPG+P ISEF+W+TGE PRRS RIS+KVK  TP  ++ P  + R+SS
Subjt:  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVK-ETPPKEEPPKKRSRKSS

Query:  GSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEK
         +KKD KE A+      EE  +K+    DK     G+ EN + E +   E +  E+ E EK+  +G       +E V K E +K     +G+  I EAEK
Subjt:  GSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEK

Query:  Q--------GNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNG
        +         N  AE V   + ++  EV+ SE E    +    ++ +    +   + K   E   + D+ +  A E  E K +     NG
Subjt:  Q--------GNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNG

Arabidopsis top hitse value%identityAlignment
AT1G15340.1 methyl-CPG-binding domain 107.1e-3541.03Show/hide
Query:  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVK-ETPPKEEPPKKRSRKSS
        DE++S+ELPAP +WKKLF PKRAGTPRK+EIVF+APTGEEI +RK LEQYLK HPG+P ISEF+W+TGE PRRS RIS+KVK  TP  ++ P  + R+SS
Subjt:  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVK-ETPPKEEPPKKRSRKSS

Query:  GSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEK
         +KKD KE A+      EE  +K+    DK     G+ EN + E +   E +  E+ E EK+  +G       +E V K E +K     +G+  I EAEK
Subjt:  GSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYIEEAEK

Query:  Q--------GNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNG
        +         N  AE V   + ++  EV+ SE E    +    ++ +    +   + K   E   + D+ +  A E  E K +     NG
Subjt:  Q--------GNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNG

AT1G15340.2 methyl-CPG-binding domain 107.9e-1832.04Show/hide
Query:  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPPKKRSRKSSG
        DE++S+ELPAP +WKKLF PKRAGTPRK+EIVF+APTGEEI +RK LEQYLK                     +   +EK +E   KE     +  K+  
Subjt:  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETPPKEEPPKKRSRKSSG

Query:  SKKDMKEEADAVPKVPE------EVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYI
        ++ + ++E + V ++ E      E E  +AE  +K G      + GQTE   A +E   E  E E +  +   D   + E V   E +K  G   G G  
Subjt:  SKKDMKEEADAVPKVPE------EVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYI

Query:  EEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQEN-NNPDKDDNDPGNVVV----LQA-----KGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNGAAH
        E ++ +G    E     E     +V K   E   EN  +   + N   NV +    L A     KG   +E      EA A ++N+ + + +  T  AA+
Subjt:  EEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQEN-NNPDKDDNDPGNVVV----LQA-----KGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNGAAH

Query:  AEDRSIKDD
         E+ + + D
Subjt:  AEDRSIKDD

AT3G15790.1 methyl-CPG-binding domain 119.2e-3543.43Show/hide
Query:  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETP-PKEEPPKKRSR-KS
        +EV+SVELPAP +WKKLF P + G+ +K+E+VF+APTGEEI NRK LEQYLK HPG+PAI+EFDW+T   PRRS RISEK K TP P +EPPKKR R KS
Subjt:  DEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKETP-PKEEPPKKRSR-KS

Query:  SGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAEN-------GQTEH---------QAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDE--
          SKKD + E  +     E   +KD E N   G  + E EN       G+TE             T   AP  +E E    K    VD  S+   K++  
Subjt:  SGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAEN-------GQTEH---------QAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDE--

Query:  --TDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQE
           +KN  + + +  +E ++++ N  AET +  E+ + TE    EK  + E
Subjt:  --TDKNGGETDGRGYIEEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACAAAGAGGAAGCCATGCTGATAGTGGAAGATGAAGCTCAAACTAAGAGTAGAGAAGGAGTAGCAGCCATGGATGAAGTCATTTCTGTGGAGCTTCCTGCCCC
ACCTACTTGGAAGAAACTGTTCATACCCAAGAGGGCAGGTACACCAAGAAAGAGTGAGATTGTATTCATTGCTCCAACTGGTGAAGAAATTGGTAACAGGAAACTGCTGG
AGCAGTACCTAAAATTGCATCCTGGTAGTCCTGCAATATCGGAGTTTGATTGGAGCACGGGCGAGGCGCCTAGAAGATCAGTAAGGATTAGTGAGAAGGTTAAGGAAACT
CCACCTAAAGAGGAGCCTCCGAAGAAACGGAGCCGAAAATCCTCCGGTTCGAAGAAAGACATGAAGGAGGAAGCTGATGCAGTTCCTAAAGTTCCTGAAGAAGTTGAAAT
GAAAGATGCAGAGGGGAATGACAAGGCGGGTGGCTATGTTGGTGAAGCTGAAAATGGTCAAACAGAACACCAGGCAGCCACCGAGGAGATGGCTCCTGAGGTGAAAGAAG
ATGAAAAGCAAGTCCTCAAGGGAAGTTCCGATGTCGATGTTAACTCTGAATTTGTCGGTAAAGACGAAACGGATAAGAATGGTGGCGAAACCGACGGTCGAGGTTACATT
GAAGAAGCTGAAAAGCAAGGAAATGATGTAGCAGAAACAGTCTCACCCAATGAGCATACTGTTGCTACTGAGGTTAACAAATCTGAAAAAGAGACAGACCAAGAAAACAA
CAATCCCGACAAGGATGACAACGATCCTGGCAATGTCGTTGTTCTACAAGCGAAAGGAGTCGTCGAGGAAGAGAAACAAAATGATCTGAATGAAGCAGCAGCACCAGAAG
ACAATGAGGCTAAGTGTAATCACGACGTTTCAACAAATGGTGCAGCTCATGCCGAGGACCGAAGCATCAAAGATGATAACATGGCAAAAGAAAACGGGAAGCTTTAG
mRNA sequenceShow/hide mRNA sequence
GGACTAACCACCAAAAAGGCACACCTCAGAGACTCTCTCTCAACGGTTTGTGTGTTCTTTTTTGGCCACAAGACCAAAAACTGGAGAGAAGGGAGAGAAGTTAGACAGAT
TTCTAGAGAGAGAAAGTGAGAAAAATGGAGAACAAAGAGGAAGCCATGCTGATAGTGGAAGATGAAGCTCAAACTAAGAGTAGAGAAGGAGTAGCAGCCATGGATGAAGT
CATTTCTGTGGAGCTTCCTGCCCCACCTACTTGGAAGAAACTGTTCATACCCAAGAGGGCAGGTACACCAAGAAAGAGTGAGATTGTATTCATTGCTCCAACTGGTGAAG
AAATTGGTAACAGGAAACTGCTGGAGCAGTACCTAAAATTGCATCCTGGTAGTCCTGCAATATCGGAGTTTGATTGGAGCACGGGCGAGGCGCCTAGAAGATCAGTAAGG
ATTAGTGAGAAGGTTAAGGAAACTCCACCTAAAGAGGAGCCTCCGAAGAAACGGAGCCGAAAATCCTCCGGTTCGAAGAAAGACATGAAGGAGGAAGCTGATGCAGTTCC
TAAAGTTCCTGAAGAAGTTGAAATGAAAGATGCAGAGGGGAATGACAAGGCGGGTGGCTATGTTGGTGAAGCTGAAAATGGTCAAACAGAACACCAGGCAGCCACCGAGG
AGATGGCTCCTGAGGTGAAAGAAGATGAAAAGCAAGTCCTCAAGGGAAGTTCCGATGTCGATGTTAACTCTGAATTTGTCGGTAAAGACGAAACGGATAAGAATGGTGGC
GAAACCGACGGTCGAGGTTACATTGAAGAAGCTGAAAAGCAAGGAAATGATGTAGCAGAAACAGTCTCACCCAATGAGCATACTGTTGCTACTGAGGTTAACAAATCTGA
AAAAGAGACAGACCAAGAAAACAACAATCCCGACAAGGATGACAACGATCCTGGCAATGTCGTTGTTCTACAAGCGAAAGGAGTCGTCGAGGAAGAGAAACAAAATGATC
TGAATGAAGCAGCAGCACCAGAAGACAATGAGGCTAAGTGTAATCACGACGTTTCAACAAATGGTGCAGCTCATGCCGAGGACCGAAGCATCAAAGATGATAACATGGCA
AAAGAAAACGGGAAGCTTTAG
Protein sequenceShow/hide protein sequence
MENKEEAMLIVEDEAQTKSREGVAAMDEVISVELPAPPTWKKLFIPKRAGTPRKSEIVFIAPTGEEIGNRKLLEQYLKLHPGSPAISEFDWSTGEAPRRSVRISEKVKET
PPKEEPPKKRSRKSSGSKKDMKEEADAVPKVPEEVEMKDAEGNDKAGGYVGEAENGQTEHQAATEEMAPEVKEDEKQVLKGSSDVDVNSEFVGKDETDKNGGETDGRGYI
EEAEKQGNDVAETVSPNEHTVATEVNKSEKETDQENNNPDKDDNDPGNVVVLQAKGVVEEEKQNDLNEAAAPEDNEAKCNHDVSTNGAAHAEDRSIKDDNMAKENGKL