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CmoCh01G001670 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G001670
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein FAR1-RELATED SEQUENCE
Genome locationCmo_Chr01:721064..724194
RNA-Seq ExpressionCmoCh01G001670
SyntenyCmoCh01G001670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606815.1 Protein FAR1-RELATED SEQUENCE 6, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1197.5Show/hide
Query:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
        +RSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
Subjt:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS

KAG7036521.1 Protein FAR1-RELATED SEQUENCE 6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2961.11Show/hide
Query:  MALRRRVTAVEKPTDRLRVRSSKMDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG------
        MALRRRVTAVEKPTDR RVRSSKMDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT   Q             +S  ++           G G      
Subjt:  MALRRRVTAVEKPTDRLRVRSSKMDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG------

Query:  -------RVR-------KGFKKKSEANRPRPETRTGCPAMIKFR
               R R        GFKKKSEANRPRPETRTGCPAMIKFR
Subjt:  -------RVR-------KGFKKKSEANRPRPETRTGCPAMIKFR

KAG7036521.1 Protein FAR1-RELATED SEQUENCE 6, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-1197.5Show/hide
Query:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
        +RSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
Subjt:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS

KAG7036521.1 Protein FAR1-RELATED SEQUENCE 6, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-1854.55Show/hide
Query:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK
        MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT   Q             +S  ++           G G             R R        GFKKK
Subjt:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK

Query:  SEANRPRPETRTGCPAMIKFR
        SEANRPRPETRTGCPAMIKFR
Subjt:  SEANRPRPETRTGCPAMIKFR

XP_022948397.1 protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita moschata]2.2e-1197.5Show/hide
Query:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
        +RSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
Subjt:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS

XP_022948397.1 protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita moschata]3.2e-1854.55Show/hide
Query:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK
        MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT   Q             +S  ++           G G             R R        GFKKK
Subjt:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK

Query:  SEANRPRPETRTGCPAMIKFR
        SEANRPRPETRTGCPAMIKFR
Subjt:  SEANRPRPETRTGCPAMIKFR

XP_022998133.1 protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita maxima]2.5e-1092.5Show/hide
Query:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
        +RSIVQVIEEGRKSKE+Y+IAIQGINDILSKLRLGTNPSS
Subjt:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS

XP_022998133.1 protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita maxima]3.2e-1854.55Show/hide
Query:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK
        MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT   Q             +S  ++           G G             R R        GFKKK
Subjt:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK

Query:  SEANRPRPETRTGCPAMIKFR
        SEANRPRPETRTGCPAMIKFR
Subjt:  SEANRPRPETRTGCPAMIKFR

XP_023523301.1 protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita pepo subsp. pepo]2.2e-1197.5Show/hide
Query:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
        +RSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
Subjt:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS

XP_023523301.1 protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Cucurbita pepo subsp. pepo]1.6e-1753.72Show/hide
Query:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK
        MDGV LNTDPVGDEEADYFEIEGDSVLADYVDQT   Q             +S  ++           G G             R R        GFKKK
Subjt:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK

Query:  SEANRPRPETRTGCPAMIKFR
        SEANRPRPETRTGCPAMIKFR
Subjt:  SEANRPRPETRTGCPAMIKFR

TrEMBL top hitse value%identityAlignment
A0A0A0KVM3 Protein FAR1-RELATED SEQUENCE3.3e-0882.5Show/hide
Query:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
        +RSIVQVIEEGRKSKE+Y IA+QGI DILSKLRLGT+ SS
Subjt:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS

A0A0A0KVM3 Protein FAR1-RELATED SEQUENCE9.5e-1648.76Show/hide
Query:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK
        MDGVSLNT+PVGD++ADYFEIEGDSV+A+YVDQ    Q             +S  ++           G G             R R        GFKK+
Subjt:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK

Query:  SEANRPRPETRTGCPAMIKFR
        SEANRPRPETRTGCPAMIKFR
Subjt:  SEANRPRPETRTGCPAMIKFR

A0A1S3BYS6 Protein FAR1-RELATED SEQUENCE9.5e-0880Show/hide
Query:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
        +RSIVQVIEEGRKSKE+Y IA+QGI DILSKLRLG + SS
Subjt:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS

A0A6J1DHG7 uncharacterized protein LOC1110209501.2e-1090Show/hide
Query:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
        ++SIVQVIEEGRKSK+RYDIAIQGINDILSKLRLGTNPS+
Subjt:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS

A0A6J1DHG7 uncharacterized protein LOC1110209502.1e-1551.24Show/hide
Query:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT----------VAMQKNRDSESELVTL--------GIG-RV-----RK--------------GFKKK
        MDGVSLNT+PVG+EE DYFEIEGDS +ADYVDQ            A+    +S  ++           G G RV     RK              GFKKK
Subjt:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT----------VAMQKNRDSESELVTL--------GIG-RV-----RK--------------GFKKK

Query:  SEANRPRPETRTGCPAMIKFR
        SEANRPRPETRTGCPAMIKFR
Subjt:  SEANRPRPETRTGCPAMIKFR

A0A6J1G944 Protein FAR1-RELATED SEQUENCE1.1e-1197.5Show/hide
Query:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
        +RSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
Subjt:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS

A0A6J1G944 Protein FAR1-RELATED SEQUENCE1.1e-1652.89Show/hide
Query:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT----------VAMQKNRDSESELVTL--------GIG-RV-----RK--------------GFKKK
        MDGVSLNT+PVGDEE DYFEIEGDSV+ADYVDQ+           A+    +S  ++           G G RV     RK              GFKKK
Subjt:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT----------VAMQKNRDSESELVTL--------GIG-RV-----RK--------------GFKKK

Query:  SEANRPRPETRTGCPAMIKFR
        SEANRPRPETRTGCPAMIKFR
Subjt:  SEANRPRPETRTGCPAMIKFR

A0A6J1KFY1 Protein FAR1-RELATED SEQUENCE1.6e-1854.55Show/hide
Query:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK
        MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT   Q             +S  ++           G G             R R        GFKKK
Subjt:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK

Query:  SEANRPRPETRTGCPAMIKFR
        SEANRPRPETRTGCPAMIKFR
Subjt:  SEANRPRPETRTGCPAMIKFR

A0A6J1KFY1 Protein FAR1-RELATED SEQUENCE1.2e-1092.5Show/hide
Query:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS
        +RSIVQVIEEGRKSKE+Y+IAIQGINDILSKLRLGTNPSS
Subjt:  FRSIVQVIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS

A0A6J1KFY1 Protein FAR1-RELATED SEQUENCE1.6e-1854.55Show/hide
Query:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK
        MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQT   Q             +S  ++           G G             R R        GFKKK
Subjt:  MDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNR----------DSESELVTL--------GIG-------------RVR-------KGFKKK

Query:  SEANRPRPETRTGCPAMIKFR
        SEANRPRPETRTGCPAMIKFR
Subjt:  SEANRPRPETRTGCPAMIKFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52520.1 FAR1-related sequence 64.8e-0458.62Show/hide
Query:  KGFKKKSEANRPRPETRTGCPAMIKFRSI
        +GFK+ ++ NR R ETRTGCPAMI+ R +
Subjt:  KGFKKKSEANRPRPETRTGCPAMIKFRSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTACGAAGACGAGTTACGGCTGTGGAGAAGCCAACAGATAGGCTACGAGTTCGCTCCTCAAAAATGGATGGAGTTTCTCTCAACACTGATCCTGTGGGCGATGA
GGAGGCAGATTATTTTGAGATCGAAGGGGATTCTGTACTTGCAGATTATGTTGATCAAACTGTTGCTATGCAAAAGAACAGGGATTCGGAGTCCGAGTTAGTAACACTTG
GTATAGGAAGAGTAAGGAAAGGTTTCAAGAAGAAGAGTGAAGCGAACCGACCGAGACCAGAAACAAGAACTGGCTGCCCTGCTATGATAAAATTTAGATCCATTGTGCAA
GTCATTGAAGAAGGGAGAAAATCGAAAGAGCGATACGATATCGCAATACAGGGAATCAATGATATACTGAGCAAGCTTCGCCTTGGAACAAATCCTTCCAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTACGAAGACGAGTTACGGCTGTGGAGAAGCCAACAGATAGGCTACGAGTTCGCTCCTCAAAAATGGATGGAGTTTCTCTCAACACTGATCCTGTGGGCGATGA
GGAGGCAGATTATTTTGAGATCGAAGGGGATTCTGTACTTGCAGATTATGTTGATCAAACTGTTGCTATGCAAAAGAACAGGGATTCGGAGTCCGAGTTAGTAACACTTG
GTATAGGAAGAGTAAGGAAAGGTTTCAAGAAGAAGAGTGAAGCGAACCGACCGAGACCAGAAACAAGAACTGGCTGCCCTGCTATGATAAAATTTAGATCCATTGTGCAA
GTCATTGAAGAAGGGAGAAAATCGAAAGAGCGATACGATATCGCAATACAGGGAATCAATGATATACTGAGCAAGCTTCGCCTTGGAACAAATCCTTCCAGTTAG
Protein sequenceShow/hide protein sequence
MALRRRVTAVEKPTDRLRVRSSKMDGVSLNTDPVGDEEADYFEIEGDSVLADYVDQTVAMQKNRDSESELVTLGIGRVRKGFKKKSEANRPRPETRTGCPAMIKFRSIVQ
VIEEGRKSKERYDIAIQGINDILSKLRLGTNPSS