; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G001710 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G001710
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSAM domain-containing protein
Genome locationCmo_Chr01:756614..757186
RNA-Seq ExpressionCmoCh01G001710
SyntenyCmoCh01G001710
Gene Ontology termsNA
InterPro domainsIPR013761 - Sterile alpha motif/pointed domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606819.1 hypothetical protein SDJN03_00161, partial [Cucurbita argyrosperma subsp. sororia]8.7e-9699.44Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
        MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS

Query:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIR
        KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDG WSNGVEEIR
Subjt:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIR

XP_022153409.1 uncharacterized protein LOC111020921 [Momordica charantia]1.3e-8081.87Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFS--VHDGD
        MDWFSWLSKTTLDPSLVYEYGLA +HNELE++DIVYFNHEFLQS+GISIAKHRLEILKLARK+ ALHPRP+TRLLLAIKRTKRCF+ LIRNFS      D
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFS--VHDGD

Query:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNG-SPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT
        DSKALVVVPKSTY+GKLLKRNKKL++AKQQG  LLTNG SPAP   PR +SFSGP+VY+LRR    EEEEDG W NGVEEIRWDTMFQNLKPT
Subjt:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNG-SPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT

XP_022948497.1 uncharacterized protein LOC111452156 [Cucurbita moschata]7.8e-105100Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
        MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS

Query:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT
        KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT
Subjt:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT

XP_022998747.1 uncharacterized protein LOC111493318 [Cucurbita maxima]3.6e-10298.95Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
        MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS

Query:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKK-EEEEDGCWSNGVEEIRWDTMFQNLKPT
        KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKK EEEEDG WSNGVEEIRWDTMFQNLKPT
Subjt:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKK-EEEEDGCWSNGVEEIRWDTMFQNLKPT

XP_023525324.1 uncharacterized protein LOC111788960 [Cucurbita pepo subsp. pepo]1.5e-10399.47Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
        MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS

Query:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT
        KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDG WSNGVEEIRWDTMFQNLKPT
Subjt:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT

TrEMBL top hitse value%identityAlignment
A0A5A7TQT5 Uncharacterized protein4.9e-6871.13Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG--D
        MDWFSWLSKT+L PSLVYEYGLAL++NELE EDI+YFNHEFLQSIGISIAKHRLEILKL RK+ ALHPRPITR+LLA+K+TKR FA LIRNF+ HD   +
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG--D

Query:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGV--WPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT
        +SKALV+VPKS+Y+ K+LKRNK   V K QGRFLLTNGSP   V    RI+ FSGP++YD+R     EEE+      GVEEIRWD MFQNLKPT
Subjt:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGV--WPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT

A0A5D3E0J4 Uncharacterized protein4.9e-6870.62Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG--D
        MDWFSWLSKT+L PSLVYEYGLAL++NELE EDI+YFNHEFLQSIGISIAKHRLEILKL RK+ ALHPRPITR+LLA+K+TKR FA LIRNF+ HD   +
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG--D

Query:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSP--APGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT
        +SKALV+VPKS+Y+ K+LKRNK   V K QGRFLLTNGSP     +  RI+ FSGP++YD+R     EEE+      GVEEIRWD MFQNLKPT
Subjt:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSP--APGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT

A0A6J1DIZ2 uncharacterized protein LOC1110209216.5e-8181.87Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFS--VHDGD
        MDWFSWLSKTTLDPSLVYEYGLA +HNELE++DIVYFNHEFLQS+GISIAKHRLEILKLARK+ ALHPRP+TRLLLAIKRTKRCF+ LIRNFS      D
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFS--VHDGD

Query:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNG-SPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT
        DSKALVVVPKSTY+GKLLKRNKKL++AKQQG  LLTNG SPAP   PR +SFSGP+VY+LRR    EEEEDG W NGVEEIRWDTMFQNLKPT
Subjt:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNG-SPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT

A0A6J1G9F1 uncharacterized protein LOC1114521563.8e-105100Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
        MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS

Query:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT
        KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT
Subjt:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT

A0A6J1K8U0 uncharacterized protein LOC1114933181.8e-10298.95Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
        MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS

Query:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKK-EEEEDGCWSNGVEEIRWDTMFQNLKPT
        KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKK EEEEDG WSNGVEEIRWDTMFQNLKPT
Subjt:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKK-EEEEDGCWSNGVEEIRWDTMFQNLKPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15760.1 Sterile alpha motif (SAM) domain-containing protein3.3e-4549.28Show/hide
Query:  WFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHP----RPITRLLLAIKRTKRCFAKLIRNF--SVHD
        WFSWLS+T L+PSL++EYGL+ S NELE EDI YF+HEFLQS+GISIAKHRLEILKLAR+D    P    R I+R++ AIK+T++C +  +R +     +
Subjt:  WFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHP----RPITRLLLAIKRTKRCFAKLIRNF--SVHD

Query:  GDDSKALVVVPKST------YSGKLLKRNKKLMV-------AKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTM
           S+ALV+VPK T      + G  LKRNK+ ++        ++Q R LLTNG+P      RI+SFS P+V+D    ++K   +D  +    E+I+WD+M
Subjt:  GDDSKALVVVPKST------YSGKLLKRNKKLMV-------AKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTM

Query:  FQNLKPT
        FQNLKPT
Subjt:  FQNLKPT

AT1G80520.1 Sterile alpha motif (SAM) domain-containing protein8.8e-4651.96Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKD---GALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG
        MDWFSWLS+T L+ SL+YEYGL+ S+NELE EDI YFNHEFLQS+GISIAKHRLEILKLAR+D     L  R I R+L+AIK+T +CF++ +R + +   
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKD---GALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG

Query:  DDSKALVVVPKSTYS---GKLLKRNKKLMVAKQQG------RFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNG--VEEIRWDTMFQN
        + S+ALVVV +ST S   G+     KK +V    G      R LLTNG+P      R++SFS P V          E++D  W N    E+I+WD+MFQN
Subjt:  DDSKALVVVPKSTYS---GKLLKRNKKLMVAKQQG------RFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNG--VEEIRWDTMFQN

Query:  LKPT
        LKPT
Subjt:  LKPT

AT2G12462.1 BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1)5.4e-1950Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKD----GALHPRPITRLLLA--IKRTK
        MDWFSWLSKT LDP+L YEYGL  +  +L+ EDI  FNH FL+ +G+++ KHR+EILKL++++     + + RP++  L++  IK TK
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKD----GALHPRPITRLLLA--IKRTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGTTCTCATGGCTTTCAAAAACGACCCTAGATCCTTCTCTCGTCTATGAATATGGCCTCGCCTTATCCCACAACGAGCTCGAACAGGAAGACATCGTTTATTT
CAACCACGAATTTCTCCAGAGCATCGGAATCTCCATTGCCAAGCACCGTCTCGAGATCCTCAAGCTAGCTCGCAAGGACGGCGCTCTCCATCCTCGCCCGATCACTCGTC
TCCTTCTCGCAATCAAGAGAACCAAGCGCTGTTTCGCCAAGTTGATTCGCAATTTCTCTGTCCATGATGGAGACGACAGCAAAGCCCTAGTCGTCGTCCCTAAATCGACC
TATTCTGGGAAATTGCTGAAGAGGAATAAGAAATTGATGGTCGCGAAACAGCAAGGGAGGTTTCTACTCACTAATGGAAGTCCAGCGCCAGGTGTGTGGCCGCGAATCGA
GAGCTTCTCCGGTCCGCTTGTGTACGATCTTCGCCGGGATGAGAAAAAGGAGGAGGAGGAGGATGGTTGCTGGAGCAATGGCGTTGAGGAGATCAGGTGGGATACGATGT
TTCAGAATTTGAAACCTACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGGTTCTCATGGCTTTCAAAAACGACCCTAGATCCTTCTCTCGTCTATGAATATGGCCTCGCCTTATCCCACAACGAGCTCGAACAGGAAGACATCGTTTATTT
CAACCACGAATTTCTCCAGAGCATCGGAATCTCCATTGCCAAGCACCGTCTCGAGATCCTCAAGCTAGCTCGCAAGGACGGCGCTCTCCATCCTCGCCCGATCACTCGTC
TCCTTCTCGCAATCAAGAGAACCAAGCGCTGTTTCGCCAAGTTGATTCGCAATTTCTCTGTCCATGATGGAGACGACAGCAAAGCCCTAGTCGTCGTCCCTAAATCGACC
TATTCTGGGAAATTGCTGAAGAGGAATAAGAAATTGATGGTCGCGAAACAGCAAGGGAGGTTTCTACTCACTAATGGAAGTCCAGCGCCAGGTGTGTGGCCGCGAATCGA
GAGCTTCTCCGGTCCGCTTGTGTACGATCTTCGCCGGGATGAGAAAAAGGAGGAGGAGGAGGATGGTTGCTGGAGCAATGGCGTTGAGGAGATCAGGTGGGATACGATGT
TTCAGAATTTGAAACCTACCTAA
Protein sequenceShow/hide protein sequence
MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDSKALVVVPKST
YSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGCWSNGVEEIRWDTMFQNLKPT