; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G001830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G001830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSerrate RNA effector molecule-like protein
Genome locationCmo_Chr01:797269..799187
RNA-Seq ExpressionCmoCh01G001830
SyntenyCmoCh01G001830
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018384.1 hypothetical protein SDJN02_20252, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3746.69Show/hide
Query:  MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------
        M RARAS SR S R        FCSK  I T+KNSNN  ING ++VESDL SY EAYKQL+NL+FM +S  L    P+K+  G                 
Subjt:  MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------

Query:  ----------------------------------RGAEKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP
                                          +  E+E IH+K  ELQ VKTRLDKLEETIKEIA+ESRKQSGS  + K+SEK Q VDKTKH  N +P
Subjt:  ----------------------------------RGAEKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP

Query:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                 SKSM+ HL G+KIV APV PK RA+  T+ +D+KH+N GG SS D+KR
Subjt:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

XP_004152172.1 uncharacterized protein LOC101207869 [Cucumis sativus]6.3e-4147.08Show/hide
Query:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISS-------------------------------
        M RARASWS FS        RSFCSK HI T+K+SNN +INGD++VE DL SYNEAYKQL+NL+ M +S                               
Subjt:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISS-------------------------------

Query:  ------------------LNLPRKRNLGRGA------EKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP
                          L L +K+     A      E E IHE   ELQ VKTRLDKLE TIKEIA+ESRKQSG+ +I K+SEKG++  KTKH  N   
Subjt:  ------------------LNLPRKRNLGRGA------EKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP

Query:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
               + +KSM+ HL G+KIV APV PKGR +E T+R D+KH NHGGGSS DA+R
Subjt:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

XP_008454169.1 PREDICTED: uncharacterized protein LOC103494654 [Cucumis melo]4.5e-3946.3Show/hide
Query:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISS-------------------------------
        M RARASWS FS        RSFCSK HI T+K+SNN +INGD++V+ DL SY+EAYKQL+NL+FM +S                               
Subjt:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISS-------------------------------

Query:  ------------------LNLPRKRNLGRGA------EKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP
                          L L +K+     A      E E IHE   ELQ VKTRLDKLE+TIKEIA+ESRKQSG+ +I K+SEKG++  KTKH  N +P
Subjt:  ------------------LNLPRKRNLGRGA------EKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP

Query:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                 +KSM+ HL G+KIV APV PK  A+E T+R+D+KH N G GSSLD KR
Subjt:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

XP_022956225.1 uncharacterized protein LOC111457985 [Cucurbita moschata]3.8e-3847.27Show/hide
Query:  MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------
        M RARAS SRFS R        FCSK  I T+KNSNN  ING ++VESDL SY EAYKQL+NL+FM +S  L    P+K+  G                 
Subjt:  MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------

Query:  ---------------------------------RGAEKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNPS
                                         +  E+E IH+K  ELQ VKTRLDKLEETIKEIA+ESRKQSGS  + K+SEK Q VDKTKH  N +P 
Subjt:  ---------------------------------RGAEKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNPS

Query:  NMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                SKSM+ HL G+KIV APV PK RA+  T+ +D+KH+N GG SS D+KR
Subjt:  NMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

XP_038901255.1 uncharacterized protein LOC120088201 [Benincasa hispida]5.3e-4048.05Show/hide
Query:  MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISS-------------------------------
        M+RARASW+RFS R       SFCSK HI  +KNS   +INGD++VESDL SYNEAYKQL+NL+FM +S                               
Subjt:  MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISS-------------------------------

Query:  ------------------LNLPRKRNLGRGA------EKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP
                          L L +K+     A      E E IHEK  ELQ VK RLDKLEETIKEIA+E RKQSG+  I K+SEKGQ+VDKTKH  N +P
Subjt:  ------------------LNLPRKRNLGRGA------EKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP

Query:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAK
                 SKSM+  L G+KIV APV PKGRA+E T+R+D KH+N  GGSS  AK
Subjt:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAK

TrEMBL top hitse value%identityAlignment
A0A0A0KTR7 Uncharacterized protein3.0e-4147.08Show/hide
Query:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISS-------------------------------
        M RARASWS FS        RSFCSK HI T+K+SNN +INGD++VE DL SYNEAYKQL+NL+ M +S                               
Subjt:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISS-------------------------------

Query:  ------------------LNLPRKRNLGRGA------EKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP
                          L L +K+     A      E E IHE   ELQ VKTRLDKLE TIKEIA+ESRKQSG+ +I K+SEKG++  KTKH  N   
Subjt:  ------------------LNLPRKRNLGRGA------EKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP

Query:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
               + +KSM+ HL G+KIV APV PKGR +E T+R D+KH NHGGGSS DA+R
Subjt:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

A0A1S3BZ75 uncharacterized protein LOC1034946542.2e-3946.3Show/hide
Query:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISS-------------------------------
        M RARASWS FS        RSFCSK HI T+K+SNN +INGD++V+ DL SY+EAYKQL+NL+FM +S                               
Subjt:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISS-------------------------------

Query:  ------------------LNLPRKRNLGRGA------EKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP
                          L L +K+     A      E E IHE   ELQ VKTRLDKLE+TIKEIA+ESRKQSG+ +I K+SEKG++  KTKH  N +P
Subjt:  ------------------LNLPRKRNLGRGA------EKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP

Query:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                 +KSM+ HL G+KIV APV PK  A+E T+R+D+KH N G GSSLD KR
Subjt:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

A0A6J1DGT5 uncharacterized protein LOC1110209341.4e-3345.14Show/hide
Query:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------
        M  AR SW RFS        RSFCSK H PT+ N NN       +VESDL SY EAYKQL+NL+FM +S  L    P+K+  G                 
Subjt:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------

Query:  ----------------------------------RGAEKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP
                                             E E I EK  ELQ VK RLDKLEETIKEIA+ESRK SGS +  K+SEK +E  K KH EN   
Subjt:  ----------------------------------RGAEKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNP

Query:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
         NMGNA E SKS+  HL  +KI  APV PKGR +E TS+++ +H N GGGSS DAKR
Subjt:  SNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

A0A6J1GVZ5 uncharacterized protein LOC1114579851.8e-3847.27Show/hide
Query:  MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------
        M RARAS SRFS R        FCSK  I T+KNSNN  ING ++VESDL SY EAYKQL+NL+FM +S  L    P+K+  G                 
Subjt:  MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------

Query:  ---------------------------------RGAEKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNPS
                                         +  E+E IH+K  ELQ VKTRLDKLEETIKEIA+ESRKQSGS  + K+SEK Q VDKTKH  N +P 
Subjt:  ---------------------------------RGAEKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNPS

Query:  NMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                SKSM+ HL G+KIV APV PK RA+  T+ +D+KH+N GG SS D+KR
Subjt:  NMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

A0A6J1IQM5 uncharacterized protein LOC1114796319.2e-3846.88Show/hide
Query:  MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------
        M RARAS SRFS R        FCSK  I T+KNSNN  ING ++VESDL SY EAYKQL+NL+FM +   L    P+K+  G                 
Subjt:  MIRARASWSRFSNR-------SFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------

Query:  ---------------------------------RGAEKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNPS
                                         +  E+E IH+K  ELQ VKTRLDKLEETIKEIA+ESRKQSGS  + K+SEK Q VDKTKH  N +P 
Subjt:  ---------------------------------RGAEKEGIHEKILELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKGQEVDKTKHEENTNPS

Query:  NMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                SKSM+ HL G+KIV APV PK RA+  T+ +D+KH+N GG SS D+KR
Subjt:  NMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80700.1 unknown protein2.9e-0425.58Show/hide
Query:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------
        MIR R SWS  S        R FC+K     +K  ++   + D+  ES +  Y+E YK+L+ L+F+ ++  L    P+K   G                 
Subjt:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------

Query:  ---------------------------RGAEKEGIHEKIL----------ELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKG-----QEVDKT
                                      EKE   +K L          EL  ++ RL K+EETIKEI +E++K SG+   K   ++      +EV + 
Subjt:  ---------------------------RGAEKEGIHEKIL----------ELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKG-----QEVDKT

Query:  KHEENTNPSNMGNAP
        + E   N    G+ P
Subjt:  KHEENTNPSNMGNAP

AT1G80980.1 unknown protein3.8e-0425.58Show/hide
Query:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------
        MIR R SWS  S        R FC+K     +K  ++  +   S  ES +  Y+E YK+L+ L+F+ ++  L    P+K   G                 
Subjt:  MIRARASWSRFS-------NRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNL----PRKRNLG-----------------

Query:  ---------------------------RGAEKEGIHEKIL----------ELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKG-----QEVDKT
                                      EKE   +K L          EL  ++ RL K+EETIKEI +E++K SG+   K   ++      +EV + 
Subjt:  ---------------------------RGAEKEGIHEKIL----------ELQTVKTRLDKLEETIKEIAIESRKQSGSDSIKKDSEKG-----QEVDKT

Query:  KHEENTNPSNMGNAP
        + E   N    G+ P
Subjt:  KHEENTNPSNMGNAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCGCGCCAGAGCCAGTTGGAGTCGATTTTCAAACCGATCATTTTGCTCAAAATTCCACATTCCGACCGACAAGAACAGCAACAATTGTAGGATAAATGGCGACAG
CAGGGTTGAATCGGATCTGAGAAGCTACAACGAGGCTTACAAGCAGCTGAATAACTTGAACTTCATGATCTCTTCACTGAACCTCCCAAGGAAAAGAAATTTGGGACGTG
GAGCTGAAAAAGAAGGAATTCATGAAAAGATTCTGGAACTTCAGACGGTTAAAACAAGACTTGATAAACTCGAGGAGACTATAAAGGAAATTGCTATTGAATCCAGGAAA
CAATCAGGGAGTGATAGTATAAAAAAGGACTCTGAAAAGGGTCAAGAAGTGGATAAAACCAAACATGAGGAAAATACTAATCCAAGCAACATGGGGAATGCGCCAGAGTT
GAGCAAGTCTATGAATATTCATCTTAGTGGAGAGAAAATAGTAGCGGCCCCTGTTTTCCCCAAAGGGCGTGCAAATGAGTGCACATCACGAAAAGATGCTAAGCATGAAA
ACCACGGTGGAGGATCTTCTCTAGATGCCAAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCGCGCCAGAGCCAGTTGGAGTCGATTTTCAAACCGATCATTTTGCTCAAAATTCCACATTCCGACCGACAAGAACAGCAACAATTGTAGGATAAATGGCGACAG
CAGGGTTGAATCGGATCTGAGAAGCTACAACGAGGCTTACAAGCAGCTGAATAACTTGAACTTCATGATCTCTTCACTGAACCTCCCAAGGAAAAGAAATTTGGGACGTG
GAGCTGAAAAAGAAGGAATTCATGAAAAGATTCTGGAACTTCAGACGGTTAAAACAAGACTTGATAAACTCGAGGAGACTATAAAGGAAATTGCTATTGAATCCAGGAAA
CAATCAGGGAGTGATAGTATAAAAAAGGACTCTGAAAAGGGTCAAGAAGTGGATAAAACCAAACATGAGGAAAATACTAATCCAAGCAACATGGGGAATGCGCCAGAGTT
GAGCAAGTCTATGAATATTCATCTTAGTGGAGAGAAAATAGTAGCGGCCCCTGTTTTCCCCAAAGGGCGTGCAAATGAGTGCACATCACGAAAAGATGCTAAGCATGAAA
ACCACGGTGGAGGATCTTCTCTAGATGCCAAGAGATGAAGGAAATGCCTCTATTGCTGCAATATCCTGCGCATAGTACTTTTCCCCTTTGATGAAGCTAGAGAAAAGCAA
GAATCCAATGGTTCCAGGTTATGTTTAATAATTATATTGCTCGAGCCAGTAGCCTTTATCATTAACAATGTAATGGTTAATAGGTAAAGGATTGATGCCCATTTTGTTTA
TGATCCATTCCTGTTTGTGTCTATTTGTGTCATGCATTTTTCAGAATTTTGAACATAATAAAAGTGATAATAACTGTTCCAAGATTA
Protein sequenceShow/hide protein sequence
MIRARASWSRFSNRSFCSKFHIPTDKNSNNCRINGDSRVESDLRSYNEAYKQLNNLNFMISSLNLPRKRNLGRGAEKEGIHEKILELQTVKTRLDKLEETIKEIAIESRK
QSGSDSIKKDSEKGQEVDKTKHEENTNPSNMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR