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CmoCh01G002300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G002300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L31
Genome locationCmo_Chr01:1029800..1031861
RNA-Seq ExpressionCmoCh01G002300
SyntenyCmoCh01G002300
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000054 - Ribosomal protein L31e
IPR020052 - Ribosomal protein L31e, conserved site
IPR023621 - Ribosomal protein L31e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152572.1 60S ribosomal protein L31 [Momordica charantia]5.3e-3495.12Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAP  IKELRKFAQ AMGTTDVRVDVKLNKHIWSRGIRSVPRRVR RIA
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

XP_023525745.1 60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo]2.8e-3597.56Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPK IKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVR RIA
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

XP_031110863.1 60S ribosomal protein L31 [Ipomoea triloba]2.9e-3287.8Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        MADK +KARK EVVTREYT+NLHKRLHGCTFKKKAP  IKE+RKFAQ AMGTTDVRVDVKLNKHIWSRGIRSVPRR+R RIA
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

XP_038903425.1 60S ribosomal protein L31 [Benincasa hispida]9.1e-3495.12Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPK IKELRKFAQ AMGTTDVRVDVKLNK+IWSRGIRSVPRRVR RIA
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

XP_040995015.1 60S ribosomal protein L31 [Juglans microcarpa x Juglans regia]3.8e-3287.8Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        M DK++K RK EVVTREYT+NLHKRLHGCTFKKKAPK IKE+RKFAQ AMGTTDVRVDVKLNKHIWSRGIRSVPRRVR RIA
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

TrEMBL top hitse value%identityAlignment
A0A218X1Y2 60S ribosomal protein L313.2e-3285.37Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        MAD+ +K RK EVVTREYT+NLHKRLHGCTFKKKAPK IKE+RKFAQ AMGTTDVRVDVKLNKH+WSRGIRSVPRRVR R+A
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

A0A2I4EAU8 60S ribosomal protein L311.9e-3287.8Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        M DK++K RK EVVTREYT+NLHKRLHGCTFKKKAPK IKE+RKFAQ AMGTTDVRVDVKLNKHIWSRGIRSVPRRVR RIA
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

A0A6J1DGM1 60S ribosomal protein L312.6e-3495.12Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAP  IKELRKFAQ AMGTTDVRVDVKLNKHIWSRGIRSVPRRVR RIA
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

A0A6P4A0Q9 60S ribosomal protein L312.4e-3287.8Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        M DK++K RK EVVTREYTVNLHKRLHGCTFKKKAPK IKE+RKFAQ AMGTTDVRVDVKLNKH+WSRGIRSVPRRVR RIA
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

I3NMM3 60S ribosomal protein L31A2.4e-3287.8Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        M +K+AK RK EVVTREYT+NLHKRLHGCTFKKKAPK IKE+RKFAQ AMGTTDVRVDVKLNKHIWSRGIRSVPRRVR RIA
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

SwissProt top hitse value%identityAlignment
O65071 60S ribosomal protein L315.4e-2974.68Show/hide
Query:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        +  K+R++EV TREYT+NLH+RLHGCTFKK APK +KE+RKFAQ AMGTTDVR+DVKLNK +WSRGIRSVPRR+R RI+
Subjt:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

P46290 60S ribosomal protein L311.3e-3082.93Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        M+DK+ K RK EVVTREYT+NLHKRLH CTFKKKAP  IKE+RKFAQ AMGT DVRVDVKLNK IWSRGIRSVPRRVR RIA
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

P51420 60S ribosomal protein L31-35.9e-2876.32Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        K RK EV+TREYT+NLH+RLH CTFKKKAPK IKE+RKFA+ AMGT DVRVDVKLNK IWS+GIR  PRR+R R+A
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

Q9M573 60S ribosomal protein L311.1e-3486.59Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        MADK +K RK EVV+REYT+NLHKRLHGCTFKKKAPK IKE+RKFAQ AMGTTDVRVDVKLNKHIWSRGIRSVPRR+R RIA
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

Q9MAV7 60S ribosomal protein L317.5e-3183.54Show/hide
Query:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        +  K RK EVVTREYT+NLHKRLHGCTFKKKAP  IKE+RKFAQ AMGT DVRVDVKLNK IWSRGIRSVPRRVR RIA
Subjt:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

Arabidopsis top hitse value%identityAlignment
AT2G19740.1 Ribosomal protein L31e family protein2.1e-2873.42Show/hide
Query:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        +  K RK EVVTREYT+NLH+RLH CTFKKKAP  IKE+RKFA  AMGT DVRVDVKLNK IWS+GIR  PRR+R R+A
Subjt:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

AT4G26230.1 Ribosomal protein L31e family protein7.2e-2976.32Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        K RK EVVTREYT+NLH+RLH CTFKKKAPK IKE+RKFA+  MGT DVRVDVKLNK IWS+GIR  PRR+R R+A
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

AT5G56710.1 Ribosomal protein L31e family protein4.2e-2976.32Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA
        K RK EV+TREYT+NLH+RLH CTFKKKAPK IKE+RKFA+ AMGT DVRVDVKLNK IWS+GIR  PRR+R R+A
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA

AT5G56710.2 Ribosomal protein L31e family protein1.5e-1878.85Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVD
        K RK EV+TREYT+NLH+RLH CTFKKKAPK IKE+RKFA+ AMGT DVRVD
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATAAATCGGCCAAGGCAAGAAAAAGCGAGGTCGTCACCAGGGAGTATACCGTCAATCTCCACAAACGCTTGCACGGATGCACATTCAAGAAGAAGGCACCGAA
GGATATCAAGGAACTCAGAAAGTTTGCTCAGAATGCTATGGGTACCACTGATGTTAGAGTGGACGTGAAACTTAACAAGCATATATGGAGTCGCGGAATTAGGAGTGTAC
CAAGGAGGGTTCGAGGGCGCATTGCATGA
mRNA sequenceShow/hide mRNA sequence
TAGGGTTTTATCTTCAGCGGCAGAGAGTTGAGTTTCCCGGGCCGTGAACAAAAAATGGCGGATAAATCGGCCAAGGCAAGAAAAAGCGAGGTCGTCACCAGGGAGTATAC
CGTCAATCTCCACAAACGCTTGCACGGATGCACATTCAAGAAGAAGGCACCGAAGGATATCAAGGAACTCAGAAAGTTTGCTCAGAATGCTATGGGTACCACTGATGTTA
GAGTGGACGTGAAACTTAACAAGCATATATGGAGTCGCGGAATTAGGAGTGTACCAAGGAGGGTTCGAGGGCGCATTGCATGAAAGCATAACGACGAGGAAGATGCCAAG
GAGGAATTCTATTCCTTAGTAACTGTCGCAGAGGTACCTGCAGAGGGATTCAAGGGCTTGGATACCAAGGTCATTGATGAAGAAGAGGACTAAATGAGCTTTCCCAAAAC
TAAGGTCAATTCTTGGTTTGCTATGGTCTTGCACATCCATTTTTGACTCGAGGTCTTTTGCAACTTTAGAAATTAAACCAAACCCATTAGGTATAGACTGAGCTATGTTT
GAATTGATATGAATTGATGTGTAAATCACCCTCGAGCTTGTTTAGCTTATTTATTATTAATCATAGATACGTATTTAAGTCACAAGCAATTAAGGAAAGATATAATGTCT
AACGGGGTAAATGACTTTACTAATTGAAGTATATCCCTCGATTAACATATCTGTAGGACAATGACAGGTTCGTGTTGAATTAAAAGTGAAATATTTAATTA
Protein sequenceShow/hide protein sequence
MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKDIKELRKFAQNAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRGRIA