CuGenDBv2

Gene ID	CmoCh01G002390
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Cellulose synthase
Genome location	Cmo_Chr01:1082903..1083750
RNA-Seq Expression	CmoCh01G002390
Synteny	CmoCh01G002390
Gene Ontology terms	GO:0009833 - plant-type primary cell wall biogenesis (biological process) GO:0030244 - cellulose biosynthetic process (biological process) GO:0071555 - cell wall organization (biological process) GO:0005886 - plasma membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016760 - cellulose synthase (UDP-forming) activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6606879.1 hypothetical protein SDJN03_00221, partial [Cucurbita argyrosperma subsp. sororia]

5.2e-69

97.89

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Query:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE
        MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE
Subjt:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE

Query:  GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPSRS
        GEIEREKEMIMVEKD+KPKKSFKQLIQLC  GQGIRRHPSRS
Subjt:  GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPSRS

KAG7036587.1 hypothetical protein SDJN02_00206, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-58

97.58

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Query:  LRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIEGEIEREKEMIMVEKDRKP
        LRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIEGEIEREKEMIMVEKD+KP
Subjt:  LRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIEGEIEREKEMIMVEKDRKP

Query:  KKSFKQLIQLCPMGQGIRRHPSRS
        KKSFKQLIQLC  GQGIRRHPSRS
Subjt:  KKSFKQLIQLCPMGQGIRRHPSRS

XP_022949377.1 uncharacterized protein LOC111452747 [Cucurbita moschata]

5.5e-71

100

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Query:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE
        MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE
Subjt:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE

Query:  GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPSRS
        GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPSRS
Subjt:  GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPSRS

XP_022998501.1 uncharacterized protein LOC111493115 [Cucurbita maxima]

4.5e-65

93.57

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Query:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE
        MGVA+EPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDY TSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQ E
Subjt:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE

Query:  GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPS
        GEIE+EKEMIMVEKD+KPKKSFKQL+QLC  GQGI RHPS
Subjt:  GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPS

XP_023525449.1 uncharacterized protein LOC111789049 [Cucurbita pepo subsp. pepo]

1.0e-64

94.29

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Query:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE
        MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE
Subjt:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE

Query:  GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPS
        GEIE+EKEMIMV KD+KPKKSFK+ IQLC  GQGIRR PS
Subjt:  GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCD9 Uncharacterized protein

3.8e-57

84.78

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Query:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE
        M VAEEPILSRL+RLD MLRRLEEIRGCGKSPKSSCASTPSSGTLTSDY TSSVDLSPK+LEKHCRPINHVVKV EL+GSLVERMDN+EDRVLKLC+Q+E
Subjt:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE

Query:  GEIEREKEMIMVE-KDRKPKKSFKQLIQLCPMGQGIRR
        G++EREK+MIMVE K+RKPK+SFKQL+Q C  GQG RR
Subjt:  GEIEREKEMIMVE-KDRKPKKSFKQLIQLCPMGQGIRR

A0A1S3CFF4 uncharacterized protein LOC103500315

2.1e-55

81.29

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Query:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE
        M VAEEPILSRL+RLDNMLRRLEEI+GC KSPKSSCASTPSSGTLTSDY TSSVDLSPK+LEKHCRPINHVV+V EL+GSLVERMDN+EDRVLKLC+Q+E
Subjt:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE

Query:  GEIEREKEMIMVE--KDRKPKKSFKQLIQLCPMGQGIRR
        GE+EREK+M+MV+  K +KPKKSFKQL+Q C  GQG  R
Subjt:  GEIEREKEMIMVE--KDRKPKKSFKQLIQLCPMGQGIRR

A0A5A7U299 Uncharacterized protein

2.1e-55

81.29

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Query:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE
        M VAEEPILSRL+RLDNMLRRLEEI+GC KSPKSSCASTPSSGTLTSDY TSSVDLSPK+LEKHCRPINHVV+V EL+GSLVERMDN+EDRVLKLC+Q+E
Subjt:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE

Query:  GEIEREKEMIMVE--KDRKPKKSFKQLIQLCPMGQGIRR
        GE+EREK+M+MV+  K +KPKKSFKQL+Q C  GQG  R
Subjt:  GEIEREKEMIMVE--KDRKPKKSFKQLIQLCPMGQGIRR

A0A6J1GBV3 uncharacterized protein LOC111452747

2.7e-71

100

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Query:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE
        MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE
Subjt:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE

Query:  GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPSRS
        GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPSRS
Subjt:  GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPSRS

A0A6J1KAC7 uncharacterized protein LOC111493115

2.2e-65

93.57

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Query:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE
        MGVA+EPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDY TSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQ E
Subjt:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIE

Query:  GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPS
        GEIE+EKEMIMVEKD+KPKKSFKQL+QLC  GQGI RHPS
Subjt:  GEIEREKEMIMVEKDRKPKKSFKQLIQLCPMGQGIRRHPS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G07985.1 Expressed protein

1.3e-22

50.38

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Query:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDL-SPKTLEK-HCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQ
        M V EEPILSRL+R+D M+R+LEE++  G SP+SS  STPSSGT     Q SS+DL SP+++ K HCR +  V + TE +G+L+ER++N+E++VLKLC Q
Subjt:  MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDL-SPKTLEK-HCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQ

Query:  IEGEIERE-KEMIMVEKDRKPKKSFKQLIQL
         E E+E E K     +K++K  K  K L +L
Subjt:  IEGEIERE-KEMIMVEKDRKPKKSFKQLIQL

Sequences

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CDS sequence

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mRNA sequence

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ATGGGTGTGGCCGAAGAACCGATTCTCTCGCGCTTGGAGCGCCTCGATAATATGTTGAGGCGGTTGGAGGAAATTAGAGGGTGCGGGAAGTCGCCAAAGAGCTCGTGTGC
ATCCACTCCATCAAGTGGGACCCTCACGAGCGATTACCAAACGTCGTCCGTTGATCTTTCCCCAAAAACTCTGGAGAAGCACTGCCGTCCGATCAACCATGTGGTCAAAG
TCACTGAACTCAGAGGAAGCCTCGTGGAGCGGATGGACAATATCGAGGATAGAGTCCTTAAGCTTTGTTTGCAAATAGAGGGAGAGATAGAAAGGGAAAAAGAGATGATA
ATGGTCGAGAAGGATAGGAAGCCTAAGAAAAGCTTTAAACAACTTATTCAATTGTGCCCGATGGGACAGGGAATACGTCGTCACCCATCTCGATCTTAGTATCGTAACCT
TCGTTCAATAACGATTTTGTTTCGAGCTCGATATAGCTCACGAGCTAGTTCTAGTTTTGTTGAGTAAGTACATAAAATTTTGATGGTTTTTGTATATGTAAGCTTGTTTG
TGACGTTAAATTTTCATCTTTCAACTATTGGACTCTCGTTATATAAGGTATAGTACTCTACCGCTTCGATG

Protein sequence

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MGVAEEPILSRLERLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYQTSSVDLSPKTLEKHCRPINHVVKVTELRGSLVERMDNIEDRVLKLCLQIEGEIEREKEMI
MVEKDRKPKKSFKQLIQLCPMGQGIRRHPSRS

CmoCh01G002390 (gene) of Cucurbita moschata (Rifu) v1 genome