CuGenDBv2

Gene ID	CmoCh01G002470
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	UPF0114 domain-containing protein
Genome location	Cmo_Chr01:1116985..1120027
RNA-Seq Expression	CmoCh01G002470
Synteny	CmoCh01G002470
Gene Ontology terms	GO:0009706 - chloroplast inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR005134 - Uncharacterised protein family UPF0114 IPR016804 - Uncharacterised protein family UPF0114, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6606889.1 hypothetical protein SDJN03_00231, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-145

97.23

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Query:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPS------GGGGAFLPI
        MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYP ASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPS      GGGGAF PI
Subjt:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPS------GGGGAFLPI

Query:  IRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDE
        IRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDE
Subjt:  IRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDE

Query:  LPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
        LPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Subjt:  LPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE

KAG7036594.1 hypothetical protein SDJN02_00213 [Cucurbita argyrosperma subsp. argyrosperma]

3.9e-133

85.44

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Query:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMG-
        MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYP ASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPS  GG  + ++RF+  
Subjt:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMG-

Query:  -------------------------SAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV
                                      +++VIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV
Subjt:  -------------------------SAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV

Query:  MLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLY
        MLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLY
Subjt:  MLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLY

Query:  ILHNLHRPE
        ILHNLHRPE
Subjt:  ILHNLHRPE

XP_022948969.1 uncharacterized protein LOC111452456 [Cucurbita moschata]

9.1e-167

100

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Query:  MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPS
        MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPS
Subjt:  MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPS

Query:  RAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYL
        RAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYL
Subjt:  RAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYL

Query:  AGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSS
        AGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSS
Subjt:  AGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSS

Query:  ASLYILHNLHRPE
        ASLYILHNLHRPE
Subjt:  ASLYILHNLHRPE

XP_022998473.1 uncharacterized protein LOC111493097 [Cucurbita maxima]

8.0e-147

98.94

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Query:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGS
        MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYP ASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNF YAYANPSGGGGAF PIIRFMGS
Subjt:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGS

Query:  AESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDR
        AESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDR
Subjt:  AESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDR

Query:  ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
        ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Subjt:  ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE

XP_023524970.1 uncharacterized protein LOC111788737 [Cucurbita pepo subsp. pepo]

5.7e-145

97.22

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Query:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPS-----GGGGAFLPII
        MA SAISPLPLAVSLGFHRLHCPTTVGRRFSYP ASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPS     GGGGAF PII
Subjt:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPS-----GGGGAFLPII

Query:  RFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEL
        RFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEL
Subjt:  RFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEL

Query:  PPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
        PPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Subjt:  PPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DH02 uncharacterized protein LOC111020358

5.3e-128

89.75

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Query:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGS
        MALSAIS  P AVSLGFHR      VGRR  YP ASLSSSSSESKSAKASSP+D V SSNGTS PLVEPSRAADSNF+YA+ANPSGGGGAF  I+ FM S
Subjt:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGS

Query:  AESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDR
         ESSIER IFDFRFLALLAVGGSLAGS LCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPD  P VDR
Subjt:  AESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDR

Query:  ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
        ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Subjt:  ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE

A0A6J1F6Z4 uncharacterized protein LOC111441432

2.4e-128

89.4

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Query:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGS
        MA SAISPLPL VS GFHR   PTT   RFSY  ASLSSSSSESKSAK SSP+    +SNGTS P VEPSRAADSNFSYA+ANPS GGGA  PI+ FM S
Subjt:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGS

Query:  AESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDR
         ESSIERVIFDFRFLALLAVGGSLAGS LCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDE PPVDR
Subjt:  AESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDR

Query:  ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
        ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Subjt:  ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE

A0A6J1GBH2 uncharacterized protein LOC111452456

4.4e-167

100

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Query:  MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPS
        MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPS
Subjt:  MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPS

Query:  RAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYL
        RAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYL
Subjt:  RAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYL

Query:  AGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSS
        AGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSS
Subjt:  AGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSS

Query:  ASLYILHNLHRPE
        ASLYILHNLHRPE
Subjt:  ASLYILHNLHRPE

A0A6J1J0L4 uncharacterized protein LOC111482385

1.5e-127

89.05

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Query:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGS
        MALS ISPLPLAVS GFHR   PT    RF Y  ASLSSSSSESKSAK SSP+    +SNGTS P VEPSRAADSNFSYA+ANPS GGGA  PI+ FM S
Subjt:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGS

Query:  AESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDR
         ESSIERVIFDFRFLALLAVGGSLAGS LCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDE PPVDR
Subjt:  AESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDR

Query:  ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
        ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Subjt:  ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE

A0A6J1KGV4 uncharacterized protein LOC111493097

3.9e-147

98.94

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Query:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGS
        MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYP ASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNF YAYANPSGGGGAF PIIRFMGS
Subjt:  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGS

Query:  AESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDR
        AESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDR
Subjt:  AESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDR

Query:  ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
        ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Subjt:  ALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G19390.1 Uncharacterised protein family (UPF0114)

4.4e-42

43.1

Show/hide

Query:  SESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDA
        S  +  K  S +    +S+  S     P R A ++ S + +  +          RF  + E  IE+VI+  RF+  L   GSL GS+LCF+ GC+Y+ D+
Subjt:  SESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDA

Query:  YKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILL
        +  Y       ++ G+++  LVEAID+YL GTVML+FG+GLY LFISN+   E    D     SSLFGMF LKERP+W+++ S+ ELKTK+GHVIVM+LL
Subjt:  YKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILL

Query:  VKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLH
        + +F++SK V I +  DLL  SV IF SSA L++L  L+
Subjt:  VKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLH

AT5G13720.1 Uncharacterised protein family (UPF0114)

3.1e-88

69.12

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Query:  MALSA-ISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMG
        MALS+ IS  PL++S+  + L  PT   RRF  P A+L SS  ES SA +S P+      NG + P    +R  DS                 P  +F  
Subjt:  MALSA-ISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMG

Query:  SAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPP-V
        S ES++ER+IFDFRFLALLAVGGSLAGSLLCFLNGCVYI +AYKVYW++C KGIHTGQMVLRLVEAIDVYLAGTVMLIF MGLYGLFIS+ SP ++PP  
Subjt:  SAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPP-V

Query:  DRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
        DRAL+ SSLFGMFA+KERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLH+ E
Subjt:  DRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGATCAATCAAAATATCTCCATTCCCCACTTGTTGAGCTTCCAAATAAATATCCTGCCCCCCCATTTCTCTTTCTCCATCACTCCAATGGCGCTTTCCGCGATCTC
CCCGCTTCCACTGGCCGTTTCCTTAGGGTTCCACCGCCTTCATTGTCCGACCACGGTGGGTCGTCGCTTTTCCTACCCTCGTGCTTCTTTGAGCTCTTCGTCTTCCGAAT
CAAAATCAGCGAAAGCATCGTCGCCCAGTGATGGCGTTAGTTCCTCCAATGGAACTTCAACGCCCTTGGTTGAACCCTCCAGAGCTGCGGACTCGAATTTCAGTTACGCG
TATGCTAACCCTAGTGGTGGTGGTGGTGCGTTTCTTCCGATTATTAGGTTTATGGGATCCGCTGAATCCTCAATTGAGAGGGTTATTTTTGACTTCCGTTTCTTGGCACT
GCTTGCTGTTGGAGGTTCACTGGCTGGTTCACTCTTGTGCTTTCTCAATGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCAAGCTGTGTCAAAGGTATCC
ATACTGGACAGATGGTTCTGCGACTAGTTGAAGCTATCGATGTGTATCTTGCTGGAACCGTCATGTTAATCTTTGGGATGGGTCTATACGGTTTGTTTATCAGCAATGTG
TCTCCTGATGAACTTCCTCCTGTTGATCGTGCCCTGAAAGGGTCCTCACTGTTTGGAATGTTTGCCTTGAAGGAGAGGCCAAAATGGATGAAAATTAGCTCTCTTGATGA
GTTGAAAACAAAAGTGGGACATGTTATTGTGATGATTCTTTTAGTAAAAATGTTCGAGAGAAGCAAGATGGTAACGATAGCCACCGGTCTTGATCTACTGAGTTATTCGG
TCTGCATTTTTCTGTCATCTGCTTCTTTATACATCCTCCATAATCTACACAGGCCAGAATAG

mRNA sequence

Show/hide mRNA sequence

TTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGTTATATTAGAAAGTTTTAAAATATTTTTTAAATAAAATAAAGAAGAAATATTATTGGGGATACTGTTCTTCGCGGTAAA
ACCAGTTGGCTCTATAATCAGACATAAACGTCGATTTCAAGTGCGAAGATGTGAATGGAGATCAATCAAAATATCTCCATTCCCCACTTGTTGAGCTTCCAAATAAATAT
CCTGCCCCCCCATTTCTCTTTCTCCATCACTCCAATGGCGCTTTCCGCGATCTCCCCGCTTCCACTGGCCGTTTCCTTAGGGTTCCACCGCCTTCATTGTCCGACCACGG
TGGGTCGTCGCTTTTCCTACCCTCGTGCTTCTTTGAGCTCTTCGTCTTCCGAATCAAAATCAGCGAAAGCATCGTCGCCCAGTGATGGCGTTAGTTCCTCCAATGGAACT
TCAACGCCCTTGGTTGAACCCTCCAGAGCTGCGGACTCGAATTTCAGTTACGCGTATGCTAACCCTAGTGGTGGTGGTGGTGCGTTTCTTCCGATTATTAGGTTTATGGG
ATCCGCTGAATCCTCAATTGAGAGGGTTATTTTTGACTTCCGTTTCTTGGCACTGCTTGCTGTTGGAGGTTCACTGGCTGGTTCACTCTTGTGCTTTCTCAATGGCTGCG
TTTATATTTGTGATGCATATAAAGTTTACTGGTCAAGCTGTGTCAAAGGTATCCATACTGGACAGATGGTTCTGCGACTAGTTGAAGCTATCGATGTGTATCTTGCTGGA
ACCGTCATGTTAATCTTTGGGATGGGTCTATACGGTTTGTTTATCAGCAATGTGTCTCCTGATGAACTTCCTCCTGTTGATCGTGCCCTGAAAGGGTCCTCACTGTTTGG
AATGTTTGCCTTGAAGGAGAGGCCAAAATGGATGAAAATTAGCTCTCTTGATGAGTTGAAAACAAAAGTGGGACATGTTATTGTGATGATTCTTTTAGTAAAAATGTTCG
AGAGAAGCAAGATGGTAACGATAGCCACCGGTCTTGATCTACTGAGTTATTCGGTCTGCATTTTTCTGTCATCTGCTTCTTTATACATCCTCCATAATCTACACAGGCCA
GAATAGGAATGCAAAGTCAAGATATGCCAGGGAAGAGCATATTATTGCCTTCATAAATCCCCTAAATGAAATTTACCATATGAGCCATATATATTTGTTTGGTTTTGGTT
GCTCTTCTTTCCTGTAATGTCTGTTTAAGTGCTGAATTCATTGTTTTCTGTCAAAAAATTTCTAGTAGCAGAAAATATTGCAGTTTCCTTTAGGGATAATTGCAGTGTGT
ATATTATATTGTAGTAAAATGCTAATGTGTATATATTTTCAGAGGTATAAACAAGACTGCTTATTATACTCATGGTTTAATCATTTGTTAAGTGAACTCCTTGTTGACAG
CTGAACAGAAGATGTGTTTTTGTAGTTGTGTTGAATCACAAAATGAAGTTTGTCAAAGAAACAATGTTGTGTGTTGTATACCATGGAGGTGATACAAAGTCATTAAGAAC
TTTAATGGCTTTGTTCTTCTTTGT

Protein sequence

Show/hide protein sequence

MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYA
YANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNV
SPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE

CmoCh01G002470 (gene) of Cucurbita moschata (Rifu) v1 genome