CuGenDBv2

Gene ID	CmoCh01G002640
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	LysM domain-containing protein
Genome location	Cmo_Chr01:1197898..1201714
RNA-Seq Expression	CmoCh01G002640
Synteny	CmoCh01G002640
Gene Ontology terms	NA
InterPro domains	IPR018392 - LysM domain IPR036779 - LysM domain superfamily IPR045030 - LysM and putative peptidoglycan-binding domain-containing protein 1-4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6606904.1 LysM and putative peptidoglycan-binding domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]

3.4e-208

99.74

Show/hide

Query:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
        MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
Subjt:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL

Query:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL
        PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL
Subjt:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL

Query:  DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA
        DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLA+DNA
Subjt:  DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA

Query:  VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTASGLPKPLTGRRNKAALD
        VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTASGLPKPLTGRRNKAALD
Subjt:  VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTASGLPKPLTGRRNKAALD

XP_022153133.1 uncharacterized protein LOC111020702 [Momordica charantia]

1.0e-159

81.04

Show/hide

Query:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
        MERGRMNGNG  D+SYE NG+HALDL DVY GESTPNGRS GKTSQ +S  +CI+HPVSKLDTLAGVAIKYGVEVADI+KMNGLVTDFQMFALKSLQIPL
Subjt:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL

Query:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL
        PGRHPPSPCLL+   TPGQSSSERTPS RLSSDFFESFQSLKLK SEQR+S AMSSLQGYYGLK SDQ+SR +GF+ AV+ +G SH  ED+ +SGT Q  
Subjt:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL

Query:  D-LLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDN
        D LLM HHRKS+S VNGF+GEK  +AD+QSAEA GD DPKWN+KL+RRRQKSVADFSHSPEM+LKDDNSSGSNGFSSSAGKG LAQRPK SSRTNLA DN
Subjt:  D-LLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDN

Query:  AVGLIPIPIGLGDSYVAVDGF-AGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD
         VGLIPIPIGLGDS+VA DGF A VRKS STSSLPDPENG TSSIWS SKWSLKPDLQAIS+AS     GLP PLTGRRNKAALD
Subjt:  AVGLIPIPIGLGDSYVAVDGF-AGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD

XP_022948795.1 uncharacterized protein LOC111452356 [Cucurbita moschata]

1.5e-208

100

Show/hide

Query:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
        MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
Subjt:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL

Query:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL
        PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL
Subjt:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL

Query:  DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA
        DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA
Subjt:  DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA

Query:  VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTASGLPKPLTGRRNKAALD
        VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTASGLPKPLTGRRNKAALD
Subjt:  VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTASGLPKPLTGRRNKAALD

XP_022998455.1 uncharacterized protein LOC111493082 [Cucurbita maxima]

3.2e-198

95.3

Show/hide

Query:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
        MERGRM GNGICDYSYE NGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
Subjt:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL

Query:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL
        PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESF SLKLKSSEQRISSAMSSLQGYYGLKPSDQRSR+NGFD AVYSEGASHDSEDM+VSGTSQDL
Subjt:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL

Query:  DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA
        DLLM HHRKSRSSVNGFLGEKVEVADL SAEAGGDGDPKWNDKLVRRRQKSVADFS+SPEMLLKDD+SSGSNGFSSSAGK LLAQRPKTSSR NLASDNA
Subjt:  DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA

Query:  VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD
        VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIW ASKWSLKPDLQAISTAS     GLPKPLTGRRNKAALD
Subjt:  VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD

XP_023524813.1 uncharacterized protein LOC111788632 [Cucurbita pepo subsp. pepo]

6.6e-204

97.65

Show/hide

Query:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
        MERGRMNGNGICDYSYE NGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
Subjt:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL

Query:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL
        PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQ L
Subjt:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL

Query:  DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA
        DLLMPHHRKSRSSVNGFLG+KVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA
Subjt:  DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA

Query:  VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD
        VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGN SSIWSASKWSLKPDLQAISTAS     GLPKPLTGRRNKAALD
Subjt:  VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DGQ0 uncharacterized protein LOC111020702

4.8e-160

81.04

Show/hide

Query:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
        MERGRMNGNG  D+SYE NG+HALDL DVY GESTPNGRS GKTSQ +S  +CI+HPVSKLDTLAGVAIKYGVEVADI+KMNGLVTDFQMFALKSLQIPL
Subjt:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL

Query:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL
        PGRHPPSPCLL+   TPGQSSSERTPS RLSSDFFESFQSLKLK SEQR+S AMSSLQGYYGLK SDQ+SR +GF+ AV+ +G SH  ED+ +SGT Q  
Subjt:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL

Query:  D-LLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDN
        D LLM HHRKS+S VNGF+GEK  +AD+QSAEA GD DPKWN+KL+RRRQKSVADFSHSPEM+LKDDNSSGSNGFSSSAGKG LAQRPK SSRTNLA DN
Subjt:  D-LLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDN

Query:  AVGLIPIPIGLGDSYVAVDGF-AGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD
         VGLIPIPIGLGDS+VA DGF A VRKS STSSLPDPENG TSSIWS SKWSLKPDLQAIS+AS     GLP PLTGRRNKAALD
Subjt:  AVGLIPIPIGLGDSYVAVDGF-AGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD

A0A6J1F865 uncharacterized protein LOC111441757

2.2e-152

78.81

Show/hide

Query:  MERGRM--NGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQI
        MERGRM  NGNG  DYSYE NG+HALDLVDVY GE+TP GR  GKTSQ +S ++CI+HPVSK DTLAGVAIKYGVEVADI+KMNGLVTDFQMFALKSLQI
Subjt:  MERGRM--NGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQI

Query:  PLPGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRIN-GFDTAVYSEGASHDSEDMLVSGTS
        PLPGRHPPSPCLLE L+T GQSSSE+TPS RLSS+FFESFQSLKLK SEQR+S AMSSLQGYYGLKP DQ+S+I+ G++ AVY +G SH  ED+ VSGT 
Subjt:  PLPGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRIN-GFDTAVYSEGASHDSEDMLVSGTS

Query:  QDLDLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSS-GSNGFSSSAGKGLLAQRPKTSSRTNLA
           DLL  HHRK++S VNGFLGEK ++ DLQS EA GDGDPKWNDKL+RRR KSVADFSH+PEMLLKDDNSS GSNGFSS+AGKG LAQRPKTSSRTNLA
Subjt:  QDLDLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSS-GSNGFSSSAGKGLLAQRPKTSSRTNLA

Query:  SDNAVGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD
        SDN +GLIPIPIGLGDS+VA DGF   RKS STSSLPD ENG  SSIWSASKWSLKPDLQAIST S     GLP PLTGRRNKAALD
Subjt:  SDNAVGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD

A0A6J1GAX1 uncharacterized protein LOC111452356

7.3e-209

100

Show/hide

Query:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
        MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
Subjt:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL

Query:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL
        PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL
Subjt:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL

Query:  DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA
        DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA
Subjt:  DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA

Query:  VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTASGLPKPLTGRRNKAALD
        VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTASGLPKPLTGRRNKAALD
Subjt:  VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTASGLPKPLTGRRNKAALD

A0A6J1J3A0 uncharacterized protein LOC111481449

1.1e-153

79.33

Show/hide

Query:  MERGRM--NGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQI
        MERGRM  NGNG  DYSYE NG+HALDLVDVY GE+TP GRSSGKTSQ +S ++CI+HPVSK DTLAGVAIKYGVEVADI+KMNGLVTDFQMFALKSLQI
Subjt:  MERGRM--NGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQI

Query:  PLPGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRIN-GFDTAVYSEGASHDSEDMLVSGTS
        PLPGRHPPSPCLLE L+T GQSSSE+TPS RLSS+FFESFQSLKLKSSEQR+S AMSSLQGYYGLKP DQ+S+I+ G++ AVY +G SH  ED+ VSGT 
Subjt:  PLPGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRIN-GFDTAVYSEGASHDSEDMLVSGTS

Query:  QDLDLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSS-GSNGFSSSAGKGLLAQRPKTSSRTNLA
           DLL  HHRK++S VNGF+GEK ++ DLQS EA GDGDPKWNDKL+RRR KSVADFSH+PEMLLKDDNSS GSNGFSS+AGKG LAQRPKTSSRTNLA
Subjt:  QDLDLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSS-GSNGFSSSAGKGLLAQRPKTSSRTNLA

Query:  SDNAVGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD
        SDN +GLIPIPIGLGD +VA DGF   RKS STSSLPD ENG TSSIWSASKWSLKPDLQAIST S     GLP PLTGRRNKAALD
Subjt:  SDNAVGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD

A0A6J1KCK3 uncharacterized protein LOC111493082

1.5e-198

95.3

Show/hide

Query:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
        MERGRM GNGICDYSYE NGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
Subjt:  MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL

Query:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL
        PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESF SLKLKSSEQRISSAMSSLQGYYGLKPSDQRSR+NGFD AVYSEGASHDSEDM+VSGTSQDL
Subjt:  PGRHPPSPCLLEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDL

Query:  DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA
        DLLM HHRKSRSSVNGFLGEKVEVADL SAEAGGDGDPKWNDKLVRRRQKSVADFS+SPEMLLKDD+SSGSNGFSSSAGK LLAQRPKTSSR NLASDNA
Subjt:  DLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNA

Query:  VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD
        VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIW ASKWSLKPDLQAISTAS     GLPKPLTGRRNKAALD
Subjt:  VGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPENGNTSSIWSASKWSLKPDLQAISTAS-----GLPKPLTGRRNKAALD

SwissProt top hits

e value

%identity

Alignment

Q3B7I8 LysM and putative peptidoglycan-binding domain-containing protein 2

9.5e-04

42.19

Show/hide

Query:  RSSGKTSQGSSPTS--CILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL
        RS G T+  ++P S   I H +S  DTL G+A+KYGV +  I++ N L +   +F  KSL IP+
Subjt:  RSSGKTSQGSSPTS--CILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPL

Q6P606 LysM and putative peptidoglycan-binding domain-containing protein 4

5.0e-05

36.26

Show/hide

Query:  ESTPNGR-SSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLEELSTPGQSSS
        E  P  R SS K  +G      +   +S  D L+ +A++YG +VADI+++N L  +  M+ALKS++IP+  +H      + EL TP Q  S
Subjt:  ESTPNGR-SSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLEELSTPGQSSS

Q99LE3 LysM and putative peptidoglycan-binding domain-containing protein 3

4.3e-04

36.9

Show/hide

Query:  DTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQI-------------PLPGRH----PPSPCLLEELSTPGQSSSERTPSA
        DTL  VA++Y   VADI+++N L++D   FAL+S++I             PL GRH    PP P   E+   P   S   + SA
Subjt:  DTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQI-------------PLPGRH----PPSPCLLEELSTPGQSSSERTPSA

Arabidopsis top hits

e value

%identity

Alignment

AT5G08200.1 peptidoglycan-binding LysM domain-containing protein

3.1e-74

47.22

Show/hide

Query:  ERGRMNGNGICDYS----YEGNGFHALDLVDVYGGESTPNGR--------SSGKTSQGSSP--------TSCILHPVSKLDTLAGVAIKYGVEVADIRKM
        ER     NG  +YS     + NGF  LD ++    +S P  +        SS   S  S P           I H +SK DTLAGVAIKYGVEVAD++KM
Subjt:  ERGRMNGNGICDYS----YEGNGFHALDLVDVYGGESTPNGR--------SSGKTSQGSSP--------TSCILHPVSKLDTLAGVAIKYGVEVADIRKM

Query:  NGLVTDFQMFALKSLQIPLPGRHPPSPCLLEELSTPGQSSSERTPSA--RLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRING-FDTA
        N LVTD QMFALKSLQIPLPGRHPPSPCL       G+  S   P +      + F+SFQSL+LKSSE+++S AM SLQGYYGLKP+D+     G F+  
Subjt:  NGLVTDFQMFALKSLQIPLPGRHPPSPCLLEELSTPGQSSSERTPSA--RLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRING-FDTA

Query:  VYSEGASH---DSEDMLVSGTSQDLDLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADF-SHSPEMLLKDDNSSGSNGF
         Y    SH   ++ D          +  + HHRKSRS VN  + E  +  D  + E         +DK +RRRQKS ADF S +PE++LK++N S + GF
Subjt:  VYSEGASH---DSEDMLVSGTSQDLDLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADF-SHSPEMLLKDDNSSGSNGF

Query:  SSSAGKGLLAQRPKTSSRTNLASDNAVG-LIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPE---NGNTSSIWSASKWSLKPDL---QAISTA--SGLP
         S AGKG LA R K SSRTNLA+++  G   P+ + L D+ V+ D F+ VRKS S SSL DP+   N  + S+W  SKWSLKPDL    AI+++   GLP
Subjt:  SSSAGKGLLAQRPKTSSRTNLASDNAVG-LIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPE---NGNTSSIWSASKWSLKPDL---QAISTA--SGLP

Query:  KPLTGRRNKAALD
        KPLTGRRNK ALD
Subjt:  KPLTGRRNKAALD

AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein

5.2e-74

48.14

Show/hide

Query:  ERGRMNGNGICDYSYEGNGFHALDLVDVYGG--ESTPNGRSS---------GKTSQGSSPTSC---ILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTD
        ERGR        + +    F     VD   G  E +P+   S           +S  SS ++C   I H VSK DTLAG+AIKYGVEVADI K+NGLVTD
Subjt:  ERGRMNGNGICDYSYEGNGFHALDLVDVYGG--ESTPNGRSS---------GKTSQGSSPTSC---ILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTD

Query:  FQMFALKSLQIPLPGRHPPSPCLLEELSTPGQSSSERTPSARLS---SDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGA
         QMFAL+SL+IPLPGRHPPSPCL       G+  SE+  S+  +    D F+SFQSL+L  SE++IS AM+SLQGYYGLKP ++R+   GF  AVY   A
Subjt:  FQMFALKSLQIPLPGRHPPSPCLLEELSTPGQSSSERTPSARLS---SDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGA

Query:  S--HDSEDMLVSGTSQDLDLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADF-SHSPEMLLKDDNSSGSNGFSSSAGKG
        S   D++  L    +    L   HHRKSRS V+  +    EV    +    G G+    DK +RRRQKS ADF S +PE+LLK++N S S  FS+ AGK 
Subjt:  S--HDSEDMLVSGTSQDLDLLMPHHRKSRSSVNGFLGEKVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADF-SHSPEMLLKDDNSSGSNGFSSSAGKG

Query:  LLAQRPKTSSRTNLASDNAVGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPE-NGNTSSIWSASKWSLKPDL-----QAISTASGLPKPLTGRRNKA
         LA R K SSR NL+++    L  IPI L D+ V  D F+ VRKS+S SSL +P  N N SS+W  SKW+LKP+L      A S   GLPKPLTGRRNK 
Subjt:  LLAQRPKTSSRTNLASDNAVGLIPIPIGLGDSYVAVDGFAGVRKSLSTSSLPDPE-NGNTSSIWSASKWSLKPDL-----QAISTASGLPKPLTGRRNKA

Query:  ALD
        A+D
Subjt:  ALD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAAGGGGGCGGATGAACGGAAATGGGATTTGTGATTATAGTTACGAGGGCAATGGTTTTCATGCGTTAGATCTTGTGGATGTCTATGGAGGAGAGAGCACGCCGAA
TGGAAGAAGCTCTGGGAAGACCTCGCAGGGTTCATCTCCTACTAGTTGCATCCTGCATCCAGTATCGAAATTAGATACTCTTGCTGGAGTTGCAATCAAATACGGTGTCG
AGGTTGCAGATATAAGGAAGATGAATGGGCTAGTCACAGATTTTCAAATGTTTGCTCTTAAATCTCTCCAGATTCCTCTTCCTGGAAGGCATCCTCCTTCTCCTTGCTTA
CTGGAAGAGCTAAGTACACCAGGACAAAGCAGCTCCGAAAGGACTCCAAGTGCACGTCTTTCATCGGATTTCTTTGAATCATTCCAATCCCTCAAACTGAAGTCTTCCGA
ACAAAGGATCTCCTCAGCCATGAGCTCTTTACAAGGTTACTATGGCCTCAAACCATCTGACCAGAGGAGCAGAATCAATGGTTTCGACACGGCAGTCTACAGTGAAGGAG
CCTCTCATGATTCAGAAGACATGCTTGTTTCTGGGACCTCACAGGATTTGGATTTACTAATGCCTCACCATCGAAAATCCAGGAGTTCAGTGAATGGATTTCTGGGTGAG
AAAGTAGAGGTGGCTGATCTGCAATCTGCAGAAGCTGGCGGCGATGGGGATCCCAAATGGAATGACAAATTGGTAAGAAGGCGCCAGAAATCTGTAGCTGACTTTTCCCA
TTCCCCTGAAATGCTCTTGAAAGATGACAACAGCAGTGGAAGTAACGGGTTCTCATCCTCGGCTGGAAAGGGCCTTTTGGCTCAAAGACCCAAAACATCTAGCAGAACTA
ATTTGGCAAGTGACAATGCGGTTGGATTGATTCCAATTCCAATAGGTTTGGGGGATTCATATGTGGCCGTTGATGGGTTTGCTGGGGTAAGAAAGTCATTGAGCACATCC
AGTTTGCCGGATCCGGAGAATGGCAACACTTCATCAATTTGGTCTGCTTCAAAGTGGAGTTTGAAACCGGATTTACAGGCAATTTCAACTGCTTCAGGCTTGCCAAAACC
TTTGACGGGTCGAAGAAACAAAGCTGCACTCGATTAG

mRNA sequence

Show/hide mRNA sequence

GATTTTCTTTTGGAGGTTTGTGATGAAAGAAGGAAGGAGCGAAATTTTTTCATTTTTTTCTGGGAATTTTTGGATTCATATATATTTTTTTTTCTTTCTCGGAAGGGGGA
AAAGTTCTTTTACGGTTACGTTCGTTCTTTTTCATTTTGGATCTACGTTTCCTTTTCGTCTTTCTGTTCATCGGCTTCTTGCAGTTTGTTTTCTTGAAAACGATTTTTTT
TTTTTTTTGGCGGTCTTGATTTGTGGAGTTGTTTTGATGAAATTGGCGTGGGTTTGGATTGATTTTGAATCTTGGGTGATTCAATGATGGTTTCATTTCTTGACGGAAAT
TGATTTGGATGGTGGATTTGAGAGACGCAGATGGAAAGGGGGCGGATGAACGGAAATGGGATTTGTGATTATAGTTACGAGGGCAATGGTTTTCATGCGTTAGATCTTGT
GGATGTCTATGGAGGAGAGAGCACGCCGAATGGAAGAAGCTCTGGGAAGACCTCGCAGGGTTCATCTCCTACTAGTTGCATCCTGCATCCAGTATCGAAATTAGATACTC
TTGCTGGAGTTGCAATCAAATACGGTGTCGAGGTTGCAGATATAAGGAAGATGAATGGGCTAGTCACAGATTTTCAAATGTTTGCTCTTAAATCTCTCCAGATTCCTCTT
CCTGGAAGGCATCCTCCTTCTCCTTGCTTACTGGAAGAGCTAAGTACACCAGGACAAAGCAGCTCCGAAAGGACTCCAAGTGCACGTCTTTCATCGGATTTCTTTGAATC
ATTCCAATCCCTCAAACTGAAGTCTTCCGAACAAAGGATCTCCTCAGCCATGAGCTCTTTACAAGGTTACTATGGCCTCAAACCATCTGACCAGAGGAGCAGAATCAATG
GTTTCGACACGGCAGTCTACAGTGAAGGAGCCTCTCATGATTCAGAAGACATGCTTGTTTCTGGGACCTCACAGGATTTGGATTTACTAATGCCTCACCATCGAAAATCC
AGGAGTTCAGTGAATGGATTTCTGGGTGAGAAAGTAGAGGTGGCTGATCTGCAATCTGCAGAAGCTGGCGGCGATGGGGATCCCAAATGGAATGACAAATTGGTAAGAAG
GCGCCAGAAATCTGTAGCTGACTTTTCCCATTCCCCTGAAATGCTCTTGAAAGATGACAACAGCAGTGGAAGTAACGGGTTCTCATCCTCGGCTGGAAAGGGCCTTTTGG
CTCAAAGACCCAAAACATCTAGCAGAACTAATTTGGCAAGTGACAATGCGGTTGGATTGATTCCAATTCCAATAGGTTTGGGGGATTCATATGTGGCCGTTGATGGGTTT
GCTGGGGTAAGAAAGTCATTGAGCACATCCAGTTTGCCGGATCCGGAGAATGGCAACACTTCATCAATTTGGTCTGCTTCAAAGTGGAGTTTGAAACCGGATTTACAGGC
AATTTCAACTGCTTCAGGCTTGCCAAAACCTTTGACGGGTCGAAGAAACAAAGCTGCACTCGATTAGTTCCATCTGGTTAAAAGGGAAAAAAAAGGGATAAATTTTCTAC
CCACTTTTGCTCCATAATTTATCAGGTTTTTTTGATGCTGCCTTTTATAGTTCAAGAAAGAATACAACTATGAAGAAATTAAAGAAGTCAAATAACAGGTCTGTTTTCGC
CTTTCATCTTTGAATTATAGTTTTCATAAAGGAGGTTGAGGTTGTTTTGGTTACAATGAATTGGTGAAATGAGTACGGTAGAATTTGTTTTTGTAAGCAAATGTGTATAT
TAGTTTATTAAGGTCAACTCCGTTGAAAAGTGAAACAAAAAGCATTTCTTTTTTCAATAAAGTGATGTTGATATTTA

Protein sequence

Show/hide protein sequence

MERGRMNGNGICDYSYEGNGFHALDLVDVYGGESTPNGRSSGKTSQGSSPTSCILHPVSKLDTLAGVAIKYGVEVADIRKMNGLVTDFQMFALKSLQIPLPGRHPPSPCL
LEELSTPGQSSSERTPSARLSSDFFESFQSLKLKSSEQRISSAMSSLQGYYGLKPSDQRSRINGFDTAVYSEGASHDSEDMLVSGTSQDLDLLMPHHRKSRSSVNGFLGE
KVEVADLQSAEAGGDGDPKWNDKLVRRRQKSVADFSHSPEMLLKDDNSSGSNGFSSSAGKGLLAQRPKTSSRTNLASDNAVGLIPIPIGLGDSYVAVDGFAGVRKSLSTS
SLPDPENGNTSSIWSASKWSLKPDLQAISTASGLPKPLTGRRNKAALD

CmoCh01G002640 (gene) of Cucurbita moschata (Rifu) v1 genome