; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G002940 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G002940
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationCmo_Chr01:1397300..1401193
RNA-Seq ExpressionCmoCh01G002940
SyntenyCmoCh01G002940
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009526 - plastid envelope (cellular component)
GO:0009534 - chloroplast thylakoid (cellular component)
GO:0009840 - chloroplastic endopeptidase Clp complex (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR018215 - ClpP, Ser active site
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036637.1 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.9e-16899.02Show/hide
Query:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
        MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGK VGGGRNLKNSPVKAIYSGEFSSLDKSSR+GLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST

Query:  ENEPGS
        ENEPG+
Subjt:  ENEPGS

XP_022948813.1 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita moschata]5.9e-170100Show/hide
Query:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
        MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST

Query:  ENEPGS
        ENEPGS
Subjt:  ENEPGS

XP_022998282.1 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita maxima]6.1e-16798.68Show/hide
Query:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
        MAHTFTYTSASSFRLNSLVSVPNSSSSS+SQKLFLPLENFHSRKLGK VGGGRNLKNSPVKAIYSGEFSSLDKSSR+GLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST

Query:  ENEP
        EN+P
Subjt:  ENEP

XP_023525498.1 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]1.9e-16899.02Show/hide
Query:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
        MAHTFTYTSASSFRLNSLV VPN SSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST

Query:  ENEPGS
        ENEPG+
Subjt:  ENEPGS

XP_023525499.1 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]5.0e-16999.35Show/hide
Query:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
        MAHTFTYTSASSFRLNSLVSVPN SSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST

Query:  ENEPGS
        ENEPG+
Subjt:  ENEPGS

TrEMBL top hitse value%identityAlignment
A0A1S3BY88 ATP-dependent Clp protease proteolytic subunit6.6e-15992.11Show/hide
Query:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
        MAHTF YTSASSFRLNSLVSVPNSSSSS+SQK FLPLE FHSRKLGK VGGGRNLKNSPVKA+YSGEFSS+D++SR+G+WSIRDDVQ+PSSPYFP YAQG
Subjt:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERFQSVISQLFQ+RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+HKANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA++YGLIDGVIMNPLKA QPLAAAAST
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST

Query:  ENEP
        E++P
Subjt:  ENEP

A0A5A7TNH0 ATP-dependent Clp protease proteolytic subunit6.6e-15992.11Show/hide
Query:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
        MAHTF YTSASSFRLNSLVSVPNSSSSS+SQK FLPLE FHSRKLGK VGGGRNLKNSPVKA+YSGEFSS+D++SR+G+WSIRDDVQ+PSSPYFP YAQG
Subjt:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERFQSVISQLFQ+RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+HKANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA++YGLIDGVIMNPLKA QPLAAAAST
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST

Query:  ENEP
        E++P
Subjt:  ENEP

A0A6J1DRD0 ATP-dependent Clp protease proteolytic subunit1.7e-15993.14Show/hide
Query:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
        MAHTF YTSASSFRLNSLVSVPNSSSSSESQKLFLPL+ F SRKLGK VGGGRNLKN+PVKAIYS EFSSLD+SSR+GLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERF SVISQLFQ+RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+HKANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAAA+T
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST

Query:  ENEPGS
        E EPG+
Subjt:  ENEPGS

A0A6J1GAD0 ATP-dependent Clp protease proteolytic subunit2.9e-170100Show/hide
Query:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
        MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST

Query:  ENEPGS
        ENEPGS
Subjt:  ENEPGS

A0A6J1K7I3 ATP-dependent Clp protease proteolytic subunit3.0e-16798.68Show/hide
Query:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG
        MAHTFTYTSASSFRLNSLVSVPNSSSSS+SQKLFLPLENFHSRKLGK VGGGRNLKNSPVKAIYSGEFSSLDKSSR+GLWSIRDDVQIPSSPYFPTYAQG
Subjt:  MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQG

Query:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
        QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA
Subjt:  QGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSA

Query:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
        GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST
Subjt:  GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAST

Query:  ENEP
        EN+P
Subjt:  ENEP

SwissProt top hitse value%identityAlignment
P54416 ATP-dependent Clp protease proteolytic subunit 11.3e-6366.13Show/hide
Query:  ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS
        +R   + S+L + RIV  G  V D+ AN++VAQLL+L+A DP KDI LY+NSPGGSV+AG+ IFDTM  IRPDV T+C+GLAASMGAFLLSAG KGKR S
Subjt:  ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS

Query:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPL
        LPNSRIMIHQPLGGAQG  TDI+IQA E+LY KA LN +L+ HTG+SLE+I  DT+RDFFMSA+E++EYGLID VI     A  P+
Subjt:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPL

Q2JIP1 ATP-dependent Clp protease proteolytic subunit 23.5e-6464.92Show/hide
Query:  ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS
        ER   + S+L + RI+  G  VDDD+AN+IVAQ+LYL++ DP KDI LY+NSPGGSV AGMAI+DTM+HI+PDVST+C+GLAASMGAFLL+ GTKGKR +
Subjt:  ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS

Query:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAS
        LP++RIMIHQPLGGAQG  TDI+IQA E+L+ K +LN  L+YHTGQ LE+I  DTDRD FM+ ++A+EYGLID VI    K  QP  AA S
Subjt:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAAAS

Q3MFR5 ATP-dependent Clp protease proteolytic subunit 11.5e-6768.45Show/hide
Query:  ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS
        ER   + S+L + RI+  G  VD ++AN+IVAQLL+LDA DP KDI LY+NSPGGSVTAGM IFDTM+HIRPDV T+C GLAASMGAFLLSAGTKGKR S
Subjt:  ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS

Query:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLA
        LP+SRIMIHQPLGGAQG  TDI+IQA E+LYHK  LN YL+ HTGQ +E+I EDT+RDFFMS  EA +YGLID VI       +P+A
Subjt:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLA

Q8YXH5 ATP-dependent Clp protease proteolytic subunit 13.4e-6768.45Show/hide
Query:  ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS
        ER   + S+L + RIV  G  VD ++AN+IVAQLL+LDA DP KDI LY+NSPGGSVTAGM IFDTM+HIRPDV T+C GLAASMGAFLLSAG KGKR S
Subjt:  ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS

Query:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLA
        LP+SRIMIHQPLGGAQG  TDI+IQA E+LYHK  LN YL+ HTGQ +E+I EDT+RDFFMS  EA++YGLID VI       +P+A
Subjt:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLA

Q9S834 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic3.9e-13280.2Show/hide
Query:  MAHTFTYTSASSFRLNS-LVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQ
        MAH    TSASS R  +  VS   + SS +S KL LP E   SRK  K V   +N KNS  KA+YSG   + +  S +G+WSIRDD+Q+PSSPYFP YAQ
Subjt:  MAHTFTYTSASSFRLNS-LVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQ

Query:  GQGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS
        GQGPPPMVQERFQS+ISQLFQ+RI+RCGGAVDDDMANIIVAQLLYLDAVDP KDI++YVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS
Subjt:  GQGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS

Query:  AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAA
        AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+HKANLNGYL+YHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAA
Subjt:  AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAA

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 52.8e-13380.2Show/hide
Query:  MAHTFTYTSASSFRLNS-LVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQ
        MAH    TSASS R  +  VS   + SS +S KL LP E   SRK  K V   +N KNS  KA+YSG   + +  S +G+WSIRDD+Q+PSSPYFP YAQ
Subjt:  MAHTFTYTSASSFRLNS-LVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQ

Query:  GQGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS
        GQGPPPMVQERFQS+ISQLFQ+RI+RCGGAVDDDMANIIVAQLLYLDAVDP KDI++YVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS
Subjt:  GQGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS

Query:  AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAA
        AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+HKANLNGYL+YHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAA
Subjt:  AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAA

AT1G11750.1 CLP protease proteolytic subunit 68.9e-3937.55Show/hide
Query:  KNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIP---SSPYFPTYAQGQGPPPMVQERFQ-----SVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDA
        + +P++ I S   S    S + GL S      I     +P F      +G PP++           + S LF++RI+  G  ++  +A  +++QL+ L +
Subjt:  KNSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIP---SSPYFPTYAQGQGPPPMVQERFQ-----SVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDA

Query:  VDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGY
        +D   DI++Y+N PGGS  + +AI+D M  I+P V TV  G+AAS GA LL+ G KG RY++PN+R+MIHQP  G  G   D+  Q NE +  +  ++  
Subjt:  VDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGY

Query:  LSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVI
         +  TGQ LEK+ + T+RD F+SA EA E+GLIDG++
Subjt:  LSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVI

AT1G66670.1 CLP protease proteolytic subunit 34.5e-5150.7Show/hide
Query:  SLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGM
        SL K  R+ L S  D     SS    + AQ     P  +E      + L + RIV  G  VDD  A+++++QLL LDA D  +DI L++NSPGGS+TAGM
Subjt:  SLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGM

Query:  AIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFM
         I+D M+  + DVSTVC+GLAASMGAFLL++G+KGKRY +PNS++MIHQPLG A G  T++ I+  EM+YHK  LN   S  TG+   +I  DTDRD F+
Subjt:  AIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFM

Query:  SAKEAEEYGLIDGVI
        +  EA+EYGLID VI
Subjt:  SAKEAEEYGLIDGVI

AT5G23140.1 nuclear-encoded CLP protease P73.1e-4448.3Show/hide
Query:  ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS
        ER   + S+L + RI+   G ++DD ++++VAQLLYL++ +P+K I +Y+NSPGG VTAG+AI+DTM++IR  +ST+C+G AASM + LL+AG KG+R S
Subjt:  ERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS

Query:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVI
        LPN+ +MIHQP GG  G   DI I   +++     LN     HTGQ L+ +  + DRD FM+ +EA+ +G+ID VI
Subjt:  LPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVI

AT5G45390.1 CLP protease P48.0e-4853.22Show/hide
Query:  VISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR
        V+  L + RIV  G ++DD +A+ I++QLL LDA DP KDI L++NSPGGS++A MAI+D ++ +R DVST+ +G+AAS  + +L AGTKGKR+++PN+R
Subjt:  VISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR

Query:  IMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVI
        IMIHQPLGGA G   D++IQA E++++K N+   ++  T +S E++ +D DRD +MS  EA EYGLIDGVI
Subjt:  IMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGACTTGTCGGGCTCAGTGAGTGTGAAAGCGAAGGGGCTCGAAGCCTCTGATGGAGATATTAACAGAGGCCTCTCGGACTTTGCTCCGAATTCTCGGCAGGTTCT
TCTTCACCCTATTGCTTTCTGTCCAGTTTTTCCGAAACCTTCAGCTGCAAAAATGGCCCATACTTTCACCTACACATCTGCCTCGTCTTTCAGATTAAACTCCCTCGTTT
CTGTTCCAAATTCGAGCTCTTCTTCCGAGTCTCAGAAGCTCTTTCTTCCGTTGGAGAATTTCCATTCGAGGAAACTAGGAAAATTCGTTGGAGGTGGAAGAAACCTTAAG
AATTCTCCTGTCAAAGCCATCTACTCAGGAGAGTTTTCATCATTGGATAAGAGTTCTCGCCGAGGACTTTGGTCTATAAGGGATGATGTGCAAATTCCATCTTCACCATA
CTTTCCAACGTACGCGCAAGGGCAAGGTCCTCCTCCAATGGTGCAGGAGCGCTTCCAAAGTGTTATCAGCCAGCTATTTCAACATAGAATTGTTCGTTGTGGTGGTGCGG
TTGATGATGATATGGCTAATATCATTGTTGCTCAACTTCTATACCTTGATGCTGTTGATCCCAATAAGGATATCATTTTGTATGTAAATTCCCCTGGTGGATCTGTTACA
GCTGGTATGGCCATTTTTGACACTATGAGGCATATTCGACCAGATGTCTCTACTGTCTGCGTAGGACTAGCCGCAAGTATGGGAGCTTTCCTGCTTAGTGCTGGAACTAA
AGGAAAAAGATACAGCTTACCAAATTCAAGGATAATGATCCATCAGCCTCTTGGTGGTGCTCAGGGTGGACAGACTGACATTGATATTCAGGCAAATGAAATGTTGTATC
ATAAGGCTAATCTTAACGGGTATCTTTCCTACCACACCGGTCAAAGTCTCGAGAAGATTAACGAAGACACTGATCGCGATTTCTTCATGAGCGCCAAAGAAGCCGAAGAG
TATGGACTCATAGATGGAGTCATCATGAATCCTCTCAAAGCTTTCCAACCTTTAGCAGCTGCAGCTTCCACCGAAAACGAGCCGGGTTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGACTTGTCGGGCTCAGTGAGTGTGAAAGCGAAGGGGCTCGAAGCCTCTGATGGAGATATTAACAGAGGCCTCTCGGACTTTGCTCCGAATTCTCGGCAGGTTCT
TCTTCACCCTATTGCTTTCTGTCCAGTTTTTCCGAAACCTTCAGCTGCAAAAATGGCCCATACTTTCACCTACACATCTGCCTCGTCTTTCAGATTAAACTCCCTCGTTT
CTGTTCCAAATTCGAGCTCTTCTTCCGAGTCTCAGAAGCTCTTTCTTCCGTTGGAGAATTTCCATTCGAGGAAACTAGGAAAATTCGTTGGAGGTGGAAGAAACCTTAAG
AATTCTCCTGTCAAAGCCATCTACTCAGGAGAGTTTTCATCATTGGATAAGAGTTCTCGCCGAGGACTTTGGTCTATAAGGGATGATGTGCAAATTCCATCTTCACCATA
CTTTCCAACGTACGCGCAAGGGCAAGGTCCTCCTCCAATGGTGCAGGAGCGCTTCCAAAGTGTTATCAGCCAGCTATTTCAACATAGAATTGTTCGTTGTGGTGGTGCGG
TTGATGATGATATGGCTAATATCATTGTTGCTCAACTTCTATACCTTGATGCTGTTGATCCCAATAAGGATATCATTTTGTATGTAAATTCCCCTGGTGGATCTGTTACA
GCTGGTATGGCCATTTTTGACACTATGAGGCATATTCGACCAGATGTCTCTACTGTCTGCGTAGGACTAGCCGCAAGTATGGGAGCTTTCCTGCTTAGTGCTGGAACTAA
AGGAAAAAGATACAGCTTACCAAATTCAAGGATAATGATCCATCAGCCTCTTGGTGGTGCTCAGGGTGGACAGACTGACATTGATATTCAGGCAAATGAAATGTTGTATC
ATAAGGCTAATCTTAACGGGTATCTTTCCTACCACACCGGTCAAAGTCTCGAGAAGATTAACGAAGACACTGATCGCGATTTCTTCATGAGCGCCAAAGAAGCCGAAGAG
TATGGACTCATAGATGGAGTCATCATGAATCCTCTCAAAGCTTTCCAACCTTTAGCAGCTGCAGCTTCCACCGAAAACGAGCCGGGTTCGTAAATTTCATCCTGCTGAGT
AGCAACCGGTTAGATATTCTTCTTCTTGTAGATTTTAATGCAAAAACCATCGTAGTGTATGCAGATTTTGACCATTATAACAACATGGCTTCCATGCTTTCATCTTAGAA
AATCTTTAAATGTCCATTGAATTCCTGTTAGTTTCCTTACACCACCAAGATATTTTATTCAAATGCCCCTCAAGTTTTTGGTTGGTTGGGATGACAAGGATAATGTTAGC
CTGACACTTGGCAATGTCTGGTTGGGTGTTGGAAAAGATGCCGCCGACCCTATAAAAGACAGCATTATTATGAAGTCACTATCTTGATTGTGGATTAATATGCGTTAGGT
TTCAATGAGAATTTCTAATGCATTCAGTAGCTTTCCGTATGCGTTGCGGGGAGGGTTTTATTACCTGTGAAATTGGCTGTTTCTGATATTTTAGTGCTCTTTTTTTCAAT
GGAGTTGTTGCATTATGGATGTGTTTCTTGACAAACTTGGG
Protein sequenceShow/hide protein sequence
MTDLSGSVSVKAKGLEASDGDINRGLSDFAPNSRQVLLHPIAFCPVFPKPSAAKMAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLK
NSPVKAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQHRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVT
AGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYHKANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEE
YGLIDGVIMNPLKAFQPLAAAASTENEPGS