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CmoCh01G003030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G003030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionrRNA adenine N(6)-methyltransferase
Genome locationCmo_Chr01:1442209..1444761
RNA-Seq ExpressionCmoCh01G003030
SyntenyCmoCh01G003030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606942.1 putative E3 ubiquitin ligase SUD1, partial [Cucurbita argyrosperma subsp. sororia]6.1e-5096.03Show/hide
Query:  RRGRRRGRRRR-RGGERAVLQRSSVDLQSTDSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDEL
        RRGRRR RRRR  GGER+VLQRSSVDLQS DSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDEL
Subjt:  RRGRRRGRRRR-RGGERAVLQRSSVDLQSTDSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDEL

Query:  LEEASEDDDDETTEKPQVKSKKTKLT
        LEEASEDDDDETTEKPQVKSKKTKLT
Subjt:  LEEASEDDDDETTEKPQVKSKKTKLT

KAG7036645.1 hypothetical protein SDJN02_00265, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-4196Show/hide
Query:  LQSTDSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
        +   DSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
Subjt:  LQSTDSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT

XP_008443784.1 PREDICTED: uncharacterized protein LOC103487289 [Cucumis melo]8.2e-3184.38Show/hide
Query:  DSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
        DSMDA A+E I   PRVK SF LGSE HLVNTANKGTLSEQLISMKE+SMAILKEYITKHNVPNDVPDEL+EEASE DDDE TEKPQVK+KKTK+T
Subjt:  DSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT

XP_022948365.1 uncharacterized protein LOC111452065 [Cucurbita moschata]7.4e-40100Show/hide
Query:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
        MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
Subjt:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT

XP_023523488.1 uncharacterized protein LOC111787690 [Cucurbita pepo subsp. pepo]1.7e-3998.94Show/hide
Query:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
        MDAQAQEVISRSPRVKASFRLG+EKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
Subjt:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT

TrEMBL top hitse value%identityAlignment
A0A0A0M0V3 Uncharacterized protein6.4e-2981.91Show/hide
Query:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
        MDA A+E I   PRVK S  LGSE HLVNTANKGTLSEQL SMKE+SMAILKEYITKHNVPNDVPDEL+EEASE DDDE TEKPQVK+KKTK+T
Subjt:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT

A0A1S3B8U1 uncharacterized protein LOC1034872894.0e-3184.38Show/hide
Query:  DSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
        DSMDA A+E I   PRVK SF LGSE HLVNTANKGTLSEQLISMKE+SMAILKEYITKHNVPNDVPDEL+EEASE DDDE TEKPQVK+KKTK+T
Subjt:  DSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT

A0A5A7SX16 Uncharacterized protein4.0e-3184.38Show/hide
Query:  DSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
        DSMDA A+E I   PRVK SF LGSE HLVNTANKGTLSEQLISMKE+SMAILKEYITKHNVPNDVPDEL+EEASE DDDE TEKPQVK+KKTK+T
Subjt:  DSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT

A0A5D3DZN8 Uncharacterized protein5.8e-3084.04Show/hide
Query:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
        MDA A+E I   PRVK SF LGSE HLVNTANKGTLSEQLISMKE+SMAILKEYITKHNVPNDVPDEL+EEASE DDDE TEKPQVK+KKTK+T
Subjt:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT

A0A6J1G9M3 uncharacterized protein LOC1114520653.6e-40100Show/hide
Query:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
        MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
Subjt:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G47820.1 unknown protein2.4e-1242.71Show/hide
Query:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVP-NDVPDELLEEASEDDDDETTEK--PQVKSKKTKL
        M+ ++   +     VK  F+LG+E + +++    T+ +QL+SMKEESM ILK++ITKHNVP +DVPD++L +  E DDD+ +    P    KKTK+
Subjt:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVP-NDVPDELLEEASEDDDDETTEK--PQVKSKKTKL

AT1G47820.2 unknown protein2.4e-1242.71Show/hide
Query:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVP-NDVPDELLEEASEDDDDETTEK--PQVKSKKTKL
        M+ ++   +     VK  F+LG+E + +++    T+ +QL+SMKEESM ILK++ITKHNVP +DVPD++L +  E DDD+ +    P    KKTK+
Subjt:  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVP-NDVPDELLEEASEDDDDETTEK--PQVKSKKTKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTGTCTTCGAGAATTTTCTTCGACACAGCTTCCTGTCTCTCCCGCCAATTGTTTCAATTTCCCTTTGTCTCTCTCTCGAAGAAGAAGAAGAAGAGGAAGAAGAAG
AGGAAGAAGAAGAGGAAGAAGAAGAAGAAGAGGAGGAGAAAGAGCAGTACTGCAGCGGAGTTCCGTAGATTTGCAATCTACAGATTCAATGGATGCCCAAGCTCAAGAAG
TTATTTCTCGAAGTCCTCGAGTTAAGGCCTCATTTCGCTTAGGGTCAGAGAAACATTTGGTCAATACAGCTAATAAAGGCACTCTCTCAGAGCAGTTGATTTCTATGAAA
GAGGAGAGCATGGCCATTTTGAAGGAGTACATAACGAAACATAATGTTCCTAACGATGTCCCAGATGAACTTCTCGAAGAGGCTTCTGAGGACGATGATGATGAAACCAC
TGAAAAGCCTCAAGTGAAGTCAAAGAAGACCAAATTAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTGTCTTCGAGAATTTTCTTCGACACAGCTTCCTGTCTCTCCCGCCAATTGTTTCAATTTCCCTTTGTCTCTCTCTCGAAGAAGAAGAAGAAGAGGAAGAAGAAG
AGGAAGAAGAAGAGGAAGAAGAAGAAGAAGAGGAGGAGAAAGAGCAGTACTGCAGCGGAGTTCCGTAGATTTGCAATCTACAGATTCAATGGATGCCCAAGCTCAAGAAG
TTATTTCTCGAAGTCCTCGAGTTAAGGCCTCATTTCGCTTAGGGTCAGAGAAACATTTGGTCAATACAGCTAATAAAGGCACTCTCTCAGAGCAGTTGATTTCTATGAAA
GAGGAGAGCATGGCCATTTTGAAGGAGTACATAACGAAACATAATGTTCCTAACGATGTCCCAGATGAACTTCTCGAAGAGGCTTCTGAGGACGATGATGATGAAACCAC
TGAAAAGCCTCAAGTGAAGTCAAAGAAGACCAAATTAACATAA
Protein sequenceShow/hide protein sequence
MFCLREFSSTQLPVSPANCFNFPLSLSRRRRRRGRRRGRRRGRRRRRGGERAVLQRSSVDLQSTDSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMK
EESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT