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CmoCh01G003080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G003080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationCmo_Chr01:1468685..1468987
RNA-Seq ExpressionCmoCh01G003080
SyntenyCmoCh01G003080
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044404.1 hypothetical protein E6C27_scaffold46G001330 [Cucumis melo var. makuwa]7.7e-2770.53Show/hide
Query:  SAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
        SA    R +EIVSGK  G   + QIY SPNL T  NRVG +AAA KPW F DPE KRRKRIAKYKVYTVEG+VKDSLRKGL+WIK +CSRIVHG+
Subjt:  SAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY

KGN52839.1 hypothetical protein Csa_014389 [Cucumis sativus]1.0e-2673.03Show/hide
Query:  RSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
        R +EIVSGK  G   + QIY SPNL T  NRVG +AA  KPW F DPE KRRKRIAKYKVYTVEG+VKDSLRKGL+WIK KCSRIVHG+
Subjt:  RSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY

XP_022949041.1 uncharacterized protein LOC111452504 [Cucurbita moschata]2.2e-50100Show/hide
Query:  MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
        MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
Subjt:  MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY

XP_022998630.1 uncharacterized protein LOC111493216 [Cucurbita maxima]6.1e-4896Show/hide
Query:  MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
        MAHFQSAHGGGR VEIVSGKRYGGDGSCQIYGSPNLATT NRVG A+AAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
Subjt:  MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY

XP_023524599.1 uncharacterized protein LOC111788494 [Cucurbita pepo subsp. pepo]2.1e-4897Show/hide
Query:  MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
        MAHFQSAHGGGR VEIVSGKRYGGDGSCQIYGSPNLAT+TNRVG AAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
Subjt:  MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY

TrEMBL top hitse value%identityAlignment
A0A0A0KV97 Uncharacterized protein4.9e-2773.03Show/hide
Query:  RSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
        R +EIVSGK  G   + QIY SPNL T  NRVG +AA  KPW F DPE KRRKRIAKYKVYTVEG+VKDSLRKGL+WIK KCSRIVHG+
Subjt:  RSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY

A0A5A7TMP6 Uncharacterized protein3.7e-2770.53Show/hide
Query:  SAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
        SA    R +EIVSGK  G   + QIY SPNL T  NRVG +AAA KPW F DPE KRRKRIAKYKVYTVEG+VKDSLRKGL+WIK +CSRIVHG+
Subjt:  SAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY

A0A6J1A329 uncharacterized protein LOC1104145023.1e-2162.38Show/hide
Query:  QSAHGGGRSVEIVSGKRYGGDGSCQIYG----SPNLATTTNR-VGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHG
        Q  +G  R VEIVSGK     G  QI+     SP+L    NR  GP+  A+KPW F DPE KR+KRIAKYKVYTVEGKVK SLRKGL+WIK KCS+IVHG
Subjt:  QSAHGGGRSVEIVSGKRYGGDGSCQIYG----SPNLATTTNR-VGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHG

Query:  Y
        Y
Subjt:  Y

A0A6J1GAV9 uncharacterized protein LOC1114525041.1e-50100Show/hide
Query:  MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
        MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
Subjt:  MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY

A0A6J1KD11 uncharacterized protein LOC1114932162.9e-4896Show/hide
Query:  MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
        MAHFQSAHGGGR VEIVSGKRYGGDGSCQIYGSPNLATT NRVG A+AAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
Subjt:  MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G19460.1 Protein of unknown function (DUF3511)9.1e-1044.23Show/hide
Query:  AAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVH
        ++++  W F DP+ +R+KR+  Y+ YTVEGK+K S RK  +WIK KC+++++
Subjt:  AAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVH

AT2G47480.1 Protein of unknown function (DUF3511)2.1e-1446.15Show/hide
Query:  QSAHGGGRSVEIVSGKRYGGDGSCQIYGS----PNLATTTNRVGPAAA-AAKPWRFG---DPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRI
        Q  +G  R  EIVSGKR       QIYG+    P+L     +V    + A+   R G   D E KR+KRIA+YK YTVEGKVK +L+ G +WIK KC +I
Subjt:  QSAHGGGRSVEIVSGKRYGGDGSCQIYGS----PNLATTTNRVGPAAA-AAKPWRFG---DPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRI

Query:  VHGY
        VH +
Subjt:  VHGY

AT3G05725.1 Protein of unknown function (DUF3511)2.8e-1157.14Show/hide
Query:  KPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHG
        K W + DPE KR++R+AKYK+Y+ EGK+K +LRK  +WIK +CS+I+HG
Subjt:  KPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHG

AT3G62640.1 Protein of unknown function (DUF3511)1.1e-1541.49Show/hide
Query:  VEIVSGKRYGGDGSCQIYGS--------PNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHG
        ++IV+GK YG  G+ Q+Y +        P++             A PWR  D E KR+KRIA YK Y +EGKVK +++KG  WIK + S I+HG
Subjt:  VEIVSGKRYGGDGSCQIYGS--------PNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHG

AT5G11970.1 Protein of unknown function (DUF3511)2.0e-0935.48Show/hide
Query:  GGRSVEIVSGKRYGGD--GSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
        GG  ++   G + GGD       YG+        +   + A +K W   DPE +R+KR+A YK+Y VEGKVK S R   +W+K + +++V+G+
Subjt:  GGRSVEIVSGKRYGGD--GSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCATTTCCAATCGGCTCACGGCGGCGGACGAAGCGTCGAGATTGTCAGCGGCAAACGCTACGGAGGAGACGGCAGCTGTCAGATCTACGGCTCGCCGAATCTGGC
TACAACTACGAACCGGGTTGGGCCGGCAGCAGCTGCGGCGAAACCGTGGCGGTTCGGCGACCCGGAGGGTAAACGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGG
TCGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGACTACAGTGGATTAAGACCAAATGCTCCCGGATCGTCCATGGATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCATTTCCAATCGGCTCACGGCGGCGGACGAAGCGTCGAGATTGTCAGCGGCAAACGCTACGGAGGAGACGGCAGCTGTCAGATCTACGGCTCGCCGAATCTGGC
TACAACTACGAACCGGGTTGGGCCGGCAGCAGCTGCGGCGAAACCGTGGCGGTTCGGCGACCCGGAGGGTAAACGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGG
TCGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGACTACAGTGGATTAAGACCAAATGCTCCCGGATCGTCCATGGATATTGA
Protein sequenceShow/hide protein sequence
MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY