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CmoCh01G003220 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G003220
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:1530683..1531641
RNA-Seq ExpressionCmoCh01G003220
SyntenyCmoCh01G003220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT03183.1 Os07g0674150, partial [Oryza sativa Japonica Group]3.0e-0442Show/hide
Query:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
        TDG+DVAPV  +L VL+R++++ AG G++++ +  L + +HV+ +D +GL
Subjt:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
KAG9146534.1 hypothetical protein Leryth_020429 [Lithospermum erythrorhizon]5.3e-0945.95Show/hide
Query:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGLGKQGRRDGRSDPLQEVAARPHRVG
        T+ +++AP++ +LW+LQ I+I+  GTG ++   +PL QT+HVQ   HI L KQ + + + D LQ   ARPHRVG
Subjt:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGLGKQGRRDGRSDPLQEVAARPHRVG
RRT69393.1 hypothetical protein B296_00009710 [Ensete ventricosum]5.8e-0860Show/hide
Query:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
        T+GIDVAPV  +LWVLQ I+I+  GTG++KS S+ L Q +HV+SS H+GL
Subjt:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
RWW05157.1 hypothetical protein GW17_00031585 [Ensete ventricosum]5.8e-0860Show/hide
Query:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
        T+GIDVAPV  +LWVLQ I+I+  GTG++KS S+ L Q +HV+SS H+GL
Subjt:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
RZR94794.1 hypothetical protein BHM03_00023549 [Ensete ventricosum]3.2e-0658Show/hide
Query:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
        TDGI++APV   LWVLQ I+IN  G  ++KS S+ L Q QHV+SS +IGL
Subjt:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
TrEMBL top hitse value%identityAlignment
A0A0P0V1R9 Os01g0315850 protein (Fragment)1.9e-0448.98Show/hide
Query:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIG
        T+G+D+APVS +L VL+ ISI   G G++K   +PL Q++HVQ  +H+G
Subjt:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIG
A0A0P0XA25 Os07g0674150 protein (Fragment)1.4e-0442Show/hide
Query:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
        TDG+DVAPV  +L VL+R++++ AG G++++ +  L + +HV+ +D +GL
Subjt:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
A0A426ZZL7 Uncharacterized protein2.8e-0860Show/hide
Query:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
        T+GIDVAPV  +LWVLQ I+I+  GTG++KS S+ L Q +HV+SS H+GL
Subjt:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
A0A444E441 Uncharacterized protein2.8e-0860Show/hide
Query:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
        T+GIDVAPV  +LWVLQ I+I+  GTG++KS S+ L Q +HV+SS H+GL
Subjt:  TDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTGACCGATGGGATTGACGTTGCCCCAGTAAGTTTCAACTTGTGGGTGTTGCAGAGGATCTCCATAAACTTCGCTGGTACTGGTCAGCAGAAATCTAGCTCCCA
CCCTCTTCGCCAAACCCAACATGTTCAAAGTTCCGACCACATTGGTCTTGGGAAGCAGGGCAGGCGAGATGGTAGATCTGATCCACTTCAAGAAGTAGCGGCTCGACCAC
ATCGTGTCGGATCAGCTCGAATCGCGGATTCCCAAAATGGTGCATCACGTTCTCCTTCCGTCCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTGACCGATGGGATTGACGTTGCCCCAGTAAGTTTCAACTTGTGGGTGTTGCAGAGGATCTCCATAAACTTCGCTGGTACTGGTCAGCAGAAATCTAGCTCCCA
CCCTCTTCGCCAAACCCAACATGTTCAAAGTTCCGACCACATTGGTCTTGGGAAGCAGGGCAGGCGAGATGGTAGATCTGATCCACTTCAAGAAGTAGCGGCTCGACCAC
ATCGTGTCGGATCAGCTCGAATCGCGGATTCCCAAAATGGTGCATCACGTTCTCCTTCCGTCCGGTGAAGAAATTGTCGACCACGATGACGCTGTCGCCTCTGTCAATCA
GACGGTCCACGAGGTGCGACCCGACAAACCCAGCTCCGCCGGTGACGACGATCCGTAGTCCTTTTCGCTTTAGCCCGAGTGGTATTTTGCCTCCGGAGTTCATGATGCGG
TGGACGTGGAACCGGGGGCGGTGCTCGTACGACGGCGTGTTTGACCACCGAGCTAGCTCTGTCGGGATCGGGTCGTAGTTGTAGCTGGCTTGGGATGCGGAATTGGAAGA
GGGGAATAGGGTGAAGGCGACGGTGGCGATGGCAATGCCGAGGAGGACGAAGAGGAGGCGCTGCTCCCGGAGCATGTAGCGGATCGGACGGGTGACGGACAGCCATGGCT
TTGGGGGTTTGGGGGAATAAGCGTCCGCCGTGGGATGGGTCTCGTCGTGCCCTCTGAAAATTAGCTCCGATCCCATTTCTTTATTTCAAATCCGATTGGGAAATCAGATG
GGGTTTAGGCGGATTTTGTTTTTTTCACGGCGGCGGAGTGGCGGGTGGCCGG
Protein sequenceShow/hide protein sequence
MKLTDGIDVAPVSFNLWVLQRISINFAGTGQQKSSSHPLRQTQHVQSSDHIGLGKQGRRDGRSDPLQEVAARPHRVGSARIADSQNGASRSPSVR