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CmoCh01G003280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G003280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like
Genome locationCmo_Chr01:1554778..1559009
RNA-Seq ExpressionCmoCh01G003280
SyntenyCmoCh01G003280
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019342 - NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011652934.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Cucumis sativus]1.6e-3895.18Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC+LLREDYLECLHH KEFQRRNRVYKEEQRKLRAA+ EAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
XP_022155272.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Momordica charantia]1.9e-3996.39Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNR+YKEEQRKLRAA+ EAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
XP_022948762.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita moschata]6.0e-41100Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
XP_023521877.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita pepo subsp. pepo]1.7e-4098.8Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLR AKGEAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
XP_038905985.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Benincasa hispida]4.3e-3995.18Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNR+YKEEQRKLRAA+ +AKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
TrEMBL top hitse value%identityAlignment
A0A0A0KTA7 Fiber protein Fb147.9e-3995.18Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC+LLREDYLECLHH KEFQRRNRVYKEEQRKLRAA+ EAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
A0A6J1DNW8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like9.3e-4096.39Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNR+YKEEQRKLRAA+ EAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
A0A6J1F476 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like1.5e-3792.77Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNRVYKEE+RKLRAA+ EAKEGK V+AAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
A0A6J1GA50 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like2.9e-41100Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
A0A6J1KEK7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like2.9e-41100Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA
SwissProt top hitse value%identityAlignment
O82238 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A9.6e-3486.25Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAA--KG-EAKEGKH
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKEFQRRNR+YKEEQRKLRAA  KG EA +G H
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAA--KG-EAKEGKH
Q9LZI6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B1.2e-3386.49Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKE
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKEFQRRNR+YKEEQRKLRAA  + +E
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKE
Arabidopsis top hitse value%identityAlignment
AT2G47690.1 NADH-ubiquinone oxidoreductase-related6.8e-3586.25Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAA--KG-EAKEGKH
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKEFQRRNR+YKEEQRKLRAA  KG EA +G H
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAA--KG-EAKEGKH
AT2G47690.2 NADH-ubiquinone oxidoreductase-related3.7e-2580.65Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQ
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKE      V K+EQ
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQ
AT3G62790.1 NADH-ubiquinone oxidoreductase-related8.9e-3586.49Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKE
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKEFQRRNR+YKEEQRKLRAA  + +E
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAGGCTGGGGAATCACCGGGAACAAGGGCCGATGCTACGATTTCTGGATTGACTTCAGCGATTGTATGTCCCGCTGCCGAGAACCAAAGGACTGTGCTCTACT
CCGTGAAGATTACCTAGAGTGCCTCCACCATTCCAAGGAGTTTCAAAGAAGAAACCGTGTCTACAAAGAGGAGCAGCGTAAACTAAGAGCGGCCAAAGGGGAGGCCAAAG
AGGGTAAACATGTTGATGCTGCTCATGCATAG
mRNA sequenceShow/hide mRNA sequence
TTATAGTTGGGTAATTTTAGTCGCAAATTTCCACTCCGTCACAACGGCTCGAGCCACACCAAACATAACTCGCAAACCAGAGACTCCGATTCAGTGGTAACCTCGAGAGA
TTCAGAAGATGGCTTCAGGCTGGGGAATCACCGGGAACAAGGGCCGATGCTACGATTTCTGGATTGACTTCAGCGATTGTATGTCCCGCTGCCGAGAACCAAAGGACTGT
GCTCTACTCCGTGAAGATTACCTAGAGTGCCTCCACCATTCCAAGGAGTTTCAAAGAAGAAACCGTGTCTACAAAGAGGAGCAGCGTAAACTAAGAGCGGCCAAAGGGGA
GGCCAAAGAGGGTAAACATGTTGATGCTGCTCATGCATAGTCATAATCATCATTCAGAGATTGAATAATGCAGAATGCATAGACATGCGTTGTTATTTGAACAGTTTTTG
GCTTGTTATTTACATTCTATTCTGTCTTTCTTGAATCCGGTATGAAATTCACAAGTCATGCAACAAGGTCAATTCACTTCTTTTTTTCCCTTGCTCGATGAGGATGATGT
GAATGTGTTAATGCCACTTATTTCCAAGTTTTGGTTTAATCAATAAGCTCTTAGCACATTGTAATTTCTATTGATATAGGACGACCCTCCTCCCCTTCCCAAATGGTCTG
GCGAAGAAGGGTCAATGTAGTATTTATATTGCCATCCACAGAGAAGGGAGGGGCCTCAACGGATGTCAGAGACGTTTGGAAGGGCCTCTAACTGGTATTACTCACTTACC
TCTATTCCCAACCCCAATATGTCGACCTGAAATGCTGGATGAAATTTTTAAATGGCTAGGATAGGACGTTGTGAATTTGTGCATCAAATGCCATATGTGTCAAAA
Protein sequenceShow/hide protein sequence
MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKEEQRKLRAAKGEAKEGKHVDAAHA