; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G003620 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G003620
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationCmo_Chr01:1760893..1764078
RNA-Seq ExpressionCmoCh01G003620
SyntenyCmoCh01G003620
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR018215 - ClpP, Ser active site
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606994.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.0e-18799.4Show/hide
Query:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN
        MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN
Subjt:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
        HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEANPPPKTRVWDLWKIEGSR
Subjt:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR

Query:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
        KAKKNLPSETKILQNGYQGSDEE SPQPETEEPSPK
Subjt:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK

KAG7036696.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-18799.4Show/hide
Query:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN
        MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN
Subjt:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
        HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEANPPPKTRVWDLWKIEGSR
Subjt:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR

Query:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
        KAKKNLPSETKILQNGYQGSDEE SPQPETEEPSPK
Subjt:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK

XP_022948597.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita moschata]7.7e-188100Show/hide
Query:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN
        MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN
Subjt:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
        HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
Subjt:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR

Query:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
        KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
Subjt:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK

XP_022997788.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita maxima]9.4e-18698.81Show/hide
Query:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN
        MELSFTYA SPSLHSRLMC+NHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAAS PALPRFEELDTTN
Subjt:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLA+GSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
        HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
Subjt:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR

Query:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
        KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
Subjt:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK

XP_023522581.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita pepo subsp. pepo]2.1e-18598.51Show/hide
Query:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN
        M+LSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLR TLSSNWDVLGNYSAASAP+LPRFEELDTTN
Subjt:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
        HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAK YGLIDEVIDDGKPGL+APIAEANPPPKTRVWDLWKIEGSR
Subjt:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR

Query:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
        KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
Subjt:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK

TrEMBL top hitse value%identityAlignment
A0A0A0LA84 ATP-dependent Clp protease proteolytic subunit5.1e-15383.82Show/hide
Query:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRK-SVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTT
        MELSFT+APSPS +  L   +HG  +S FP+STP KHSHG N +SNAFRIR  SVPV     S SSS LRRTLSSNWDV  NYS +SA +LPRFEELDTT
Subjt:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRK-SVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTT

Query:  NMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVM
        NMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAASMGAFLLA+GSKGKRFCMPNGRVM
Subjt:  NMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVM

Query:  IHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGS
        IHQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKP+EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEA PPPKTR+WDLWK+EGS
Subjt:  IHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGS

Query:  RKAKKNLPSETKILQNGY----QGSDEERSPQPETEEPSP
        RKAKKNLPSE+KIL+NGY    QGSD+ER  Q ETEEPSP
Subjt:  RKAKKNLPSETKILQNGY----QGSDEERSPQPETEEPSP

A0A1S3C615 ATP-dependent Clp protease proteolytic subunit4.6e-15485Show/hide
Query:  MELSFTYAPSPSLHSRLMCFNHGV-LASPFPVSTPFKHSHGANSSSNAFRIRK-SVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDT
        MELSFT+APSPS +  L  F+HG+  +S  P+STP  HSHG N +SN FRIR  SVPV     SLSSS LRRTLSSNWDVL NYSA+SAP+LPRFEELDT
Subjt:  MELSFTYAPSPSLHSRLMCFNHGV-LASPFPVSTPFKHSHGANSSSNAFRIRK-SVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDT

Query:  TNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRV
        TNMLLRQRIIFLGSQVDD+TADFIISQLLFLDAEDPTKDIKL INSPGGSVTAGMGIYDAMKLCKADVST+C+GLAASMGAFLLA+GSKGKRFCMPNGRV
Subjt:  TNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRV

Query:  MIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEG
        MIHQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEA PPPKTRVWDLWK+EG
Subjt:  MIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEG

Query:  SRKAKKNLPSETKILQNGYQ---GSDEERSPQPETEEPSP
        SRKAKKNLPSE+KIL+NGYQ   GSDEER  Q ETEEPSP
Subjt:  SRKAKKNLPSETKILQNGYQ---GSDEERSPQPETEEPSP

A0A6J1CQN6 ATP-dependent Clp protease proteolytic subunit2.2e-15685.8Show/hide
Query:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN
        ME+SFTY PSPS   RLM F+HGVL+S FP+ TP KHSHG NSS N  R  KS P+  VKASLSSS +RRTLSSNWDVL N+SA SAP+L RFEELDTTN
Subjt:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAED TKDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAASMGAFLLAAGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
        HQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTRVWDLWK+EGSR
Subjt:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR

Query:  KAKKNLPSETKILQNGY---QGSDEERSPQPETEEPSP
        KAKKNLPSE KILQNGY   QG+DEER  Q ETEEPSP
Subjt:  KAKKNLPSETKILQNGY---QGSDEERSPQPETEEPSP

A0A6J1G9P1 ATP-dependent Clp protease proteolytic subunit3.7e-188100Show/hide
Query:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN
        MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN
Subjt:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
        HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
Subjt:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR

Query:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
        KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
Subjt:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK

A0A6J1KEX5 ATP-dependent Clp protease proteolytic subunit4.5e-18698.81Show/hide
Query:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN
        MELSFTYA SPSLHSRLMC+NHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAAS PALPRFEELDTTN
Subjt:  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLA+GSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
        HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR
Subjt:  HQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR

Query:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
        KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK
Subjt:  KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK

SwissProt top hitse value%identityAlignment
O34125 ATP-dependent Clp protease proteolytic subunit 21.7e-5763.37Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNG
        D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L INSPGGSVTAGM IYD M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI
        R+MIHQPLG A G+A D+ I+ RE+ YHK  LN +L++ TG+PLE+IE+DTDRD FM+P EAK YGLID+V+
Subjt:  RVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI

Q3MFR5 ATP-dependent Clp protease proteolytic subunit 13.5e-5862.03Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNG
        D  + LLR+RIIFLG QVD   A+ I++QLLFLDAEDP KDI L INSPGGSVTAGMGI+D MK  + DV T+C GLAASMGAFLL+AG+KGKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEAN
        R+MIHQPLG A G+ATD+ I+ RE+ YHK +LN  L+  TG+P+E+I  DT+RD FM+P EA++YGLID+VID    G   P+A  N
Subjt:  RVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEAN

Q5N1P6 ATP-dependent Clp protease proteolytic subunit 31.7e-5763.37Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNG
        D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L INSPGGSVTAGM IYD M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI
        R+MIHQPLG A G+A D+ I+ RE+ YHK  LN +L++ TG+PLE+IE+DTDRD FM+P EAK YGLID+V+
Subjt:  RVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI

Q8YXH5 ATP-dependent Clp protease proteolytic subunit 15.9e-5864.74Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNG
        D  + LLR+RI+FLG QVD   A+ I++QLLFLDAEDP KDI L INSPGGSVTAGMGI+D MK  + DV T+C GLAASMGAFLL+AG+KGKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID
        R+MIHQPLG A G+ATD+ I+ RE+ YHK +LN  L+  TG+P+E+I  DT+RD FM+P EAK+YGLID+VID
Subjt:  RVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID

Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic3.8e-11375.09Show/hide
Query:  RIRKSVPVAAVKASLS-SSPLRRTLSSNWDV--LGNYSAASAPA-LPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINS
        RI K+     V++S+S S P R+TLSSNWDV      S A +P+ LP FEELDTTNMLLRQRI+FLGSQVDDMTAD +ISQLL LDAED  +DI L INS
Subjt:  RIRKSVPVAAVKASLS-SSPLRRTLSSNWDV--LGNYSAASAPA-LPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINS

Query:  PGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIE
        PGGS+TAGMGIYDAMK CKADVSTVC+GLAASMGAFLLA+GSKGKR+CMPN +VMIHQPLGTAGG+AT+MSIR+REM YHKIKLNKI SRITGKP  +IE
Subjt:  PGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIE

Query:  LDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSRKAKKNLPSETKILQNGY
         DTDRDNF+NPWEAKEYGLID VIDDGKPGLIAPI +  PPPKT+VWDLWK+EG++K   NLPSE  + QNGY
Subjt:  LDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSRKAKKNLPSETKILQNGY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 55.9e-5352.68Show/hide
Query:  WDVLGNYSAASAPALPRFEE------------LDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCK
        W +  +    S+P  P + +                + L + RII  G  VDD  A+ I++QLL+LDA DPTKDI + +NSPGGSVTAGM I+D M+  +
Subjt:  WDVLGNYSAASAPALPRFEE------------LDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCK

Query:  ADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGL
         DVSTVC+GLAASMGAFLL+AG+KGKR+ +PN R+MIHQPLG A G  TD+ I+  EM +HK  LN  L+  TG+ LE+I  DTDRD FM+  EAKEYGL
Subjt:  ADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGL

Query:  IDEVI
        ID VI
Subjt:  IDEVI

AT1G11750.1 CLP protease proteolytic subunit 62.5e-3543.1Show/hide
Query:  LDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPN
        LD +++L R RIIF+G  ++   A  +ISQL+ L + D   DI + +N PGGS  + + IYD M   K  V TV  G+AAS GA LLA G KG R+ MPN
Subjt:  LDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPN

Query:  GRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID
         RVMIHQP    GG   D+  ++ E    + K++++ +  TG+PLE+++  T+RD F++  EA E+GLID +++
Subjt:  GRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID

AT1G66670.1 CLP protease proteolytic subunit 32.7e-11475.09Show/hide
Query:  RIRKSVPVAAVKASLS-SSPLRRTLSSNWDV--LGNYSAASAPA-LPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINS
        RI K+     V++S+S S P R+TLSSNWDV      S A +P+ LP FEELDTTNMLLRQRI+FLGSQVDDMTAD +ISQLL LDAED  +DI L INS
Subjt:  RIRKSVPVAAVKASLS-SSPLRRTLSSNWDV--LGNYSAASAPA-LPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINS

Query:  PGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIE
        PGGS+TAGMGIYDAMK CKADVSTVC+GLAASMGAFLLA+GSKGKR+CMPN +VMIHQPLGTAGG+AT+MSIR+REM YHKIKLNKI SRITGKP  +IE
Subjt:  PGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIE

Query:  LDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSRKAKKNLPSETKILQNGY
         DTDRDNF+NPWEAKEYGLID VIDDGKPGLIAPI +  PPPKT+VWDLWK+EG++K   NLPSE  + QNGY
Subjt:  LDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSRKAKKNLPSETKILQNGY

AT5G23140.1 nuclear-encoded CLP protease P78.0e-4245.98Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNG
        D  + LL++RII +   ++D T+  +++QLL+L++E+P+K I + +NSPGG VTAG+ IYD M+  ++ +ST+C+G AASM + LLAAG+KG+R  +PN 
Subjt:  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDD
         VMIHQP G   G+A D++I  +++      LN++  + TG+PL+ +  + DRD+FM P EAK +G+IDEVID+
Subjt:  RVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDD

AT5G45390.1 CLP protease P43.5e-5345.42Show/hide
Query:  PFPVSTPFKHSHGANSSS----NAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTADFII
        P  VS+    S  A+SSS    N   ++ +  ++    + S SPLR    +N  +  + +  SA    R  E D   +LLR+RI+FLGS +DD  AD I+
Subjt:  PFPVSTPFKHSHGANSSS----NAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTADFII

Query:  SQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAY
        SQLL LDA+DP KDIKL INSPGGS++A M IYD ++L +ADVST+ +G+AAS  + +L AG+KGKRF MPN R+MIHQPLG A G+A D+ I+ +E+ +
Subjt:  SQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAY

Query:  HKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPP
        +K  +  I++  T +  EQ+  D DRD +M+P EA EYGLID VID      + P+ +   P
Subjt:  HKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGAGTTTCACATACGCACCTTCTCCTTCGCTTCACAGCAGGCTTATGTGCTTCAACCATGGAGTTTTAGCTTCTCCCTTTCCAGTTTCCACTCCTTTCAAGCA
CTCTCATGGCGCTAATTCCAGTTCTAATGCTTTTAGAATCAGGAAATCCGTTCCCGTTGCGGCGGTCAAGGCCTCGCTCAGTTCGTCGCCTCTGAGACGAACCTTATCCA
GTAATTGGGATGTTTTGGGAAACTATTCTGCAGCTTCGGCGCCAGCGCTGCCTCGATTCGAAGAGCTCGATACAACCAATATGCTTCTACGCCAGCGAATCATCTTCTTG
GGCTCTCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAGCTACTCTTTCTTGATGCTGAAGATCCAACAAAGGATATCAAATTGTTAATCAACTCACCTGGTGG
TTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTGTGCAAGGCCGATGTTTCAACGGTTTGTATGGGACTTGCCGCATCCATGGGAGCTTTTCTTCTAGCTG
CTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGTAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGGAGAGCGACAGATATGAGCATCCGGCTACGAGAG
ATGGCGTATCACAAGATTAAGCTGAACAAAATTTTGTCTAGGATCACAGGAAAACCATTGGAGCAGATTGAATTGGACACGGATCGTGATAACTTCATGAATCCCTGGGA
AGCAAAGGAATATGGTTTGATTGATGAAGTTATTGATGATGGAAAGCCAGGACTCATTGCTCCAATCGCAGAAGCCAATCCTCCGCCCAAGACCCGAGTTTGGGATCTAT
GGAAGATCGAAGGGAGTCGTAAAGCTAAGAAGAATTTGCCTTCAGAAACCAAGATTTTGCAGAATGGATACCAAGGAAGTGATGAGGAGCGCAGTCCCCAGCCAGAAACA
GAAGAACCAAGTCCTAAATGA
mRNA sequenceShow/hide mRNA sequence
GATACCAAATTCCGGCAACCCCAATCTTGGATTTCTCGACGGCTCCCTGAAAGGAACGAAAATGGAGTTGAGTTTCACATACGCACCTTCTCCTTCGCTTCACAGCAGGC
TTATGTGCTTCAACCATGGAGTTTTAGCTTCTCCCTTTCCAGTTTCCACTCCTTTCAAGCACTCTCATGGCGCTAATTCCAGTTCTAATGCTTTTAGAATCAGGAAATCC
GTTCCCGTTGCGGCGGTCAAGGCCTCGCTCAGTTCGTCGCCTCTGAGACGAACCTTATCCAGTAATTGGGATGTTTTGGGAAACTATTCTGCAGCTTCGGCGCCAGCGCT
GCCTCGATTCGAAGAGCTCGATACAACCAATATGCTTCTACGCCAGCGAATCATCTTCTTGGGCTCTCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAGCTAC
TCTTTCTTGATGCTGAAGATCCAACAAAGGATATCAAATTGTTAATCAACTCACCTGGTGGTTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTGTGCAAG
GCCGATGTTTCAACGGTTTGTATGGGACTTGCCGCATCCATGGGAGCTTTTCTTCTAGCTGCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGTAGAGTGATGAT
CCATCAACCTCTTGGAACAGCTGGAGGGAGAGCGACAGATATGAGCATCCGGCTACGAGAGATGGCGTATCACAAGATTAAGCTGAACAAAATTTTGTCTAGGATCACAG
GAAAACCATTGGAGCAGATTGAATTGGACACGGATCGTGATAACTTCATGAATCCCTGGGAAGCAAAGGAATATGGTTTGATTGATGAAGTTATTGATGATGGAAAGCCA
GGACTCATTGCTCCAATCGCAGAAGCCAATCCTCCGCCCAAGACCCGAGTTTGGGATCTATGGAAGATCGAAGGGAGTCGTAAAGCTAAGAAGAATTTGCCTTCAGAAAC
CAAGATTTTGCAGAATGGATACCAAGGAAGTGATGAGGAGCGCAGTCCCCAGCCAGAAACAGAAGAACCAAGTCCTAAATGACAGGACACCCGCCCTGTTCTTCCATTGT
TGTATCCTACTTTGTTCTTTCCATTCTCAAATAGCTCCTTCTCTGTAAGATCTTAAAGGTTATTATTACCAATCAGTTAAAACCAGTTATAGGTTTTGGAAAATTCAAGA
GTCCAAGCAGTCGATATCTGAATCCATGTCGAAACCTCAGTACGACATTAACGGTGAGACTTAGTTTTGTAAAGGCTCAGATCCACCGCTAGCAGATATTGTCCTCTTTA
GGCTTTCCTGTTCGGGTTTCCCCTTGAGACTTTATAAAATGTGTCTGTTAGGGGAAGGTTTCTACACCTTTATAAATGGTGTTTTGTTCTCCTCACTAACTAATATGGGA
CATCACAATCCACCCCCTTCGGGGCCCAACGTTCTTAC
Protein sequenceShow/hide protein sequence
MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFL
GSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLRE
MAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSRKAKKNLPSETKILQNGYQGSDEERSPQPET
EEPSPK