; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G003630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G003630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:1764434..1767100
RNA-Seq ExpressionCmoCh01G003630
SyntenyCmoCh01G003630
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606995.1 hypothetical protein SDJN03_00337, partial [Cucurbita argyrosperma subsp. sororia]4.7e-7599.27Show/hide
Query:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
        MALNLHCCCLSARFIS HSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
Subjt:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT

Query:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
        MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
Subjt:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV

KAG7036697.1 hypothetical protein SDJN02_00317 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-7498.54Show/hide
Query:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
        MALNLHCCCLSARFIS HSEVRDFRSGCLNRTSKLSANSLKFSRIRSS+NSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
Subjt:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT

Query:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
        MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
Subjt:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV

XP_022948602.1 uncharacterized protein LOC111452227 [Cucurbita moschata]9.4e-76100Show/hide
Query:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
        MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
Subjt:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT

Query:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
        MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
Subjt:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV

XP_022997797.1 uncharacterized protein LOC111492645 [Cucurbita maxima]2.2e-7296.35Show/hide
Query:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
        MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANS K  RIRSSANS++QLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
Subjt:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT

Query:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
        MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
Subjt:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV

XP_023522633.1 uncharacterized protein LOC111786627 [Cucurbita pepo subsp. pepo]1.1e-7195.62Show/hide
Query:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
        MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANS K   IRSSANS++QLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
Subjt:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT

Query:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
        MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
Subjt:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV

TrEMBL top hitse value%identityAlignment
A0A0A0L8V5 Uncharacterized protein2.5e-5882.35Show/hide
Query:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
        MA NLHC   SA FIS HS+    RS  LNRTSKLS+NS K   IR SANSN+QLTLRTCRNCKAQFDPSLNHPRACRFHT+HFGGETKRKFESVH+GGT
Subjt:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT

Query:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD
        MDTPDSGKV QYWHCCGSEDPFDPGCTA+PHSSYDD
Subjt:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD

A0A1S3C5F2 uncharacterized protein LOC1034968571.7e-5479.41Show/hide
Query:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
        MA NLHC   S  FIS HS     RS     TSK  +NSLKF  IR SANSN+QLTLRTCRNCK+QFDPSLNHPRACRFHTAHFGGETKRKFESVH GGT
Subjt:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT

Query:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD
        MDTPDSGKV QYWHCCGSEDPFDPGCTA+PHSSYDD
Subjt:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD

A0A6J1CNX1 uncharacterized protein LOC1110131995.6e-5882.14Show/hide
Query:  MALNLHCCCLSARFISF----HSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVH
        MALNLHC C S RF+       SEV   RS  LNR SKLSA+S KF  IR+SANSN+QLTLRTCRNCK QFDPSLNHPRACRFHTAHFGGETKRKFESVH
Subjt:  MALNLHCCCLSARFISF----HSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVH

Query:  TGGTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD
        TGGTMDTPDSGKV QYWHCCGSEDPFDPGCTAAPHSSYDD
Subjt:  TGGTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD

A0A6J1G9P5 uncharacterized protein LOC1114522274.6e-76100Show/hide
Query:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
        MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
Subjt:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT

Query:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
        MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
Subjt:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV

A0A6J1K626 uncharacterized protein LOC1114926451.1e-7296.35Show/hide
Query:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
        MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANS K  RIRSSANS++QLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
Subjt:  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT

Query:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
        MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV
Subjt:  MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65000.1 unknown protein1.8e-0833.73Show/hide
Query:  RTCRNCKAQFDPSLNHPRACRFHTAHF----GGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD
        + C+ CK  +    N   +CRFH + F      + KR +E       +   D     +++ CCG+EDP  PGC   PH SYDD
Subjt:  RTCRNCKAQFDPSLNHPRACRFHTAHF----GGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD

AT5G38060.1 unknown protein1.1e-4273.58Show/hide
Query:  RTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAP
        +T KL  NS +F    ++++S+   TLRTC+NCK QFDP LN+PRACRFHTAHFGGETKRKFESV+TGGTMDTP+SGKVLQYWHCCGSEDPFD GCTA+P
Subjt:  RTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAP

Query:  HSSYDD
        H++YDD
Subjt:  HSSYDD

AT5G38060.2 unknown protein2.8e-3363.21Show/hide
Query:  RTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAP
        +T KL  NS +F    ++++S+   TLRTC+NCK QFDP LN+PRACRFHTAHFG            GGTMDTP+SGKVLQYWHCCGSEDPFD GCTA+P
Subjt:  RTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAP

Query:  HSSYDD
        H++YDD
Subjt:  HSSYDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTAAATCTCCATTGTTGCTGTTTATCAGCTCGTTTCATTTCTTTCCATTCAGAAGTTAGAGATTTTCGTTCCGGTTGTCTGAATCGCACTTCGAAACTGAGTGC
AAATTCGCTGAAATTCTCTAGAATCCGTAGCTCTGCGAATTCTAACGATCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCTTCCCTTAATCATC
CTCGAGCTTGCCGATTTCATACTGCTCATTTTGGAGGTGAAACAAAGCGTAAGTTTGAAAGTGTACACACAGGAGGAACAATGGACACTCCAGACTCTGGCAAAGTCTTA
CAATACTGGCATTGCTGTGGGTCTGAGGATCCTTTTGATCCGGGATGTACCGCTGCTCCACACTCGTCCTACGACGACGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATTAGAACGAACTCCTGACTTCATCTATCACTGGTACAGAAATCTACCATTTCGGAGCAATGGCTCTAAATCTCCATTGTTGCTGTTTATCAGCTCGTTTCATTTCTTTC
CATTCAGAAGTTAGAGATTTTCGTTCCGGTTGTCTGAATCGCACTTCGAAACTGAGTGCAAATTCGCTGAAATTCTCTAGAATCCGTAGCTCTGCGAATTCTAACGATCA
ATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCTTCCCTTAATCATCCTCGAGCTTGCCGATTTCATACTGCTCATTTTGGAGGTGAAACAAAGCGTA
AGTTTGAAAGTGTACACACAGGAGGAACAATGGACACTCCAGACTCTGGCAAAGTCTTACAATACTGGCATTGCTGTGGGTCTGAGGATCCTTTTGATCCGGGATGTACC
GCTGCTCCACACTCGTCCTACGACGACGTTTAATACCATAGATCGAACCGACAACCTTTCTCAAGGTCCCCTTCTTTCATGTAAGTCTTTAATTTCCTTTTCTTCATGAA
ATCATGTGTACATATTCATATCCTATCTGAAATGTTGGGTTGGGTAACTTTTTTTGGTCATCTTTGAGTTGGAAATTAACGGAATATAATTTTCCAAGTTATTAGTTTCT
ATTTATGTCTTACTATAATGTAAAATATATCATTCTCACATATACCTTTTAAAACCGTCCTTCTCAACTCTGTCTAAATTCGTTCTTTTTGATACAACAAATGGGGTATG
AGAATTTGAACCTCCGACCTCAAAAGAATAAATAC
Protein sequenceShow/hide protein sequence
MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSLKFSRIRSSANSNDQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVL
QYWHCCGSEDPFDPGCTAAPHSSYDDV