; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G003950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G003950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSenescence-associated protein
Genome locationCmo_Chr01:1947357..1948143
RNA-Seq ExpressionCmoCh01G003950
SyntenyCmoCh01G003950
Gene Ontology termsNA
InterPro domainsIPR040358 - Uncharacterized protein At4g22758-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036722.1 hypothetical protein SDJN02_00342, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-6696.97Show/hide
Query:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG
        MLKRSTSKMRNSKCN+ILVSVNVVGSTGPIRFVANEDDLVCEVMKTTL SYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG
Subjt:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG

Query:  TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR
        TSHASLPKENGKNNWKTWLTKSL TTYNI+AR
Subjt:  TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR

XP_022948336.1 uncharacterized protein LOC111452042 [Cucurbita moschata]7.0e-68100Show/hide
Query:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG
        MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG
Subjt:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG

Query:  TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR
        TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR
Subjt:  TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR

XP_022998111.1 uncharacterized protein LOC111492858 [Cucurbita maxima]7.2e-6596.21Show/hide
Query:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG
        MLKRS S+MRNSKCNRILVSVNVVGSTGPIRFVAN+DDLVCEVMKTTLTSYARLARLP LGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG
Subjt:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG

Query:  TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR
        TS ASLPKENGKNNWKTWLTKSLLTTYNIIAR
Subjt:  TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR

XP_023525569.1 uncharacterized protein LOC111789142 [Cucurbita pepo subsp. pepo]1.6e-6799.24Show/hide
Query:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG
        MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLC+KEG
Subjt:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG

Query:  TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR
        TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR
Subjt:  TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR

XP_038907220.1 uncharacterized protein LOC120092999 [Benincasa hispida]3.1e-4468.75Show/hide
Query:  MLKRSTS-----KMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFL
        MLKRS +      + N+KCNR LVS+NV+GSTGPIRFV NEDDLVCEV+KT+LT YAR ARLPTLGTNVDNF+LYCVND   DALS RE IG+KQVRHFL
Subjt:  MLKRSTS-----KMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFL

Query:  LCKKEGTSHASLP---------KENGKNNWKTWLTKSLLTTYNI
        LCKK+GTSHA LP         +E G+NNWKTWL KS   +YNI
Subjt:  LCKKEGTSHASLP---------KENGKNNWKTWLTKSLLTTYNI

TrEMBL top hitse value%identityAlignment
A0A0A0L707 Uncharacterized protein3.5e-4165.94Show/hide
Query:  MLKRSTSKM-----RNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFL
        MLKRST+K       N+KCNR LVS+NV+GSTGPIRFVANEDDLVCE++KT+LT YAR ARLP LGTNVDNF+L+CVND   DALS RE+IG+KQVRHFL
Subjt:  MLKRSTSKM-----RNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFL

Query:  LCKKEGTSHASL---------PKENGKNNWKTWLTKSL
        LCKK+G+ H+ L          +E G+N+WK WL KSL
Subjt:  LCKKEGTSHASL---------PKENGKNNWKTWLTKSL

A0A1S3C4I6 uncharacterized protein LOC1034967951.2e-3866.18Show/hide
Query:  MLKRSTSKM-----RNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFL
        MLKRST+        N+KCNR LVS+NV+GSTGP+RFVANEDDLVCEV+KT+LT YAR  RLP LGTNVDNF LY VND   DALS RE+IG+KQVRHFL
Subjt:  MLKRSTSKM-----RNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVND-GMDALSLREAIGAKQVRHFL

Query:  LCKKEGTSHA-------SLPKENGKNNWKTWLTKSL
        LCKK+GTSH+       S  +E  K +WK WL KSL
Subjt:  LCKKEGTSHA-------SLPKENGKNNWKTWLTKSL

A0A6J1CNZ1 uncharacterized protein LOC1110132141.5e-3673.39Show/hide
Query:  LKRSTSK-----MRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIG-AKQVRHFLL
        LKR+TS      + + KC+R L+S+NV+GSTGPIRFV NEDDLVCEVMKTTL +YAR ARLP LGTNVDNF+LYCVNDG++ALS RE IG +KQVRHFLL
Subjt:  LKRSTSK-----MRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIG-AKQVRHFLL

Query:  CKKEGTSHA
        CKK+GTSHA
Subjt:  CKKEGTSHA

A0A6J1G8Y8 uncharacterized protein LOC1114520423.4e-68100Show/hide
Query:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG
        MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG
Subjt:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG

Query:  TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR
        TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR
Subjt:  TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR

A0A6J1K9B8 uncharacterized protein LOC1114928583.5e-6596.21Show/hide
Query:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG
        MLKRS S+MRNSKCNRILVSVNVVGSTGPIRFVAN+DDLVCEVMKTTLTSYARLARLP LGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG
Subjt:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEG

Query:  TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR
        TS ASLPKENGKNNWKTWLTKSLLTTYNIIAR
Subjt:  TSHASLPKENGKNNWKTWLTKSLLTTYNIIAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23150.1 unknown protein2.1e-2246.77Show/hide
Query:  KCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSHASLPKENGK
        K NRIL+SV  +GS GPIRFVANE DLV  V+ T L  YAR  RLP LG++ ++FV YC   G  ALS  EAIG+  VR+F+LCKK+      + ++ G+
Subjt:  KCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSHASLPKENGK

Query:  NN-------------WKTWLTKSL
        +N             +K W+ KSL
Subjt:  NN-------------WKTWLTKSL

AT1G70780.1 unknown protein2.5e-2344.27Show/hide
Query:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK--
        +L     K +N+K NRIL+SV V+GS GPIRFVA EDDLV  V+ T L  YAR  RLP LG++ ++F+LYC   G +ALS  +AIG+   R+F+LC+K  
Subjt:  MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK--

Query:  -------EGTSHASLPKENGKNNWKTWLTKS
                G S +++       + K W+ KS
Subjt:  -------EGTSHASLPKENGKNNWKTWLTKS

AT4G22758.1 unknown protein9.9e-0431.33Show/hide
Query:  RILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK
        ++++SV V GS GP+R +      V E +K  +  Y +  R P L  +   F L+  +  +  L  RE IG    R F + KK
Subjt:  RILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKK

AT5G37730.1 unknown protein2.1e-2255.17Show/hide
Query:  KCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKE
        K  ++LVSVNV+GS GPIRF+ANEDD V   + TTL +YAR  R+P LG +VDNF+ Y +N G + L  +E IG+  V +FL+CKKE
Subjt:  KCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAGAGAAGCACGTCAAAGATGAGAAATTCAAAGTGTAATAGAATTTTGGTGTCTGTCAATGTGGTTGGGAGCACAGGACCCATTAGGTTCGTGGCAAATGAAGA
TGATTTGGTTTGTGAGGTGATGAAGACCACTCTTACATCATATGCTCGCCTTGCTCGTCTACCTACTCTCGGAACTAACGTTGATAACTTCGTTCTCTATTGCGTTAACG
ATGGAATGGATGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCTATGTAAGAAGGAAGGGACTTCACATGCATCGTTGCCTAAAGAAAAT
GGGAAAAATAATTGGAAGACGTGGCTGACCAAGTCTTTACTTACAACGTACAATATTATTGCACGTTGA
mRNA sequenceShow/hide mRNA sequence
TGGATGGCTGAGTGCTTCTTCTTGATCAGCACCAATCTCTGTTCTCGTCCTCATTCCTAAGCACCAGCTTTCGTCCTCGTCCTCTTTGTCCTCGTTCTTAAGCATGACAT
TAGATAGTAAGCTTTAAGTGTTGTCGTTTATCCAAAAATTGTTAGCATGTTGAAGAGAAGCACGTCAAAGATGAGAAATTCAAAGTGTAATAGAATTTTGGTGTCTGTCA
ATGTGGTTGGGAGCACAGGACCCATTAGGTTCGTGGCAAATGAAGATGATTTGGTTTGTGAGGTGATGAAGACCACTCTTACATCATATGCTCGCCTTGCTCGTCTACCT
ACTCTCGGAACTAACGTTGATAACTTCGTTCTCTATTGCGTTAACGATGGAATGGATGCTCTAAGCCTTAGGGAAGCCATAGGAGCAAAGCAAGTTAGGCACTTTTTGCT
ATGTAAGAAGGAAGGGACTTCACATGCATCGTTGCCTAAAGAAAATGGGAAAAATAATTGGAAGACGTGGCTGACCAAGTCTTTACTTACAACGTACAATATTATTGCAC
GTTGAAAAATTTGTCTAATGAAAAACAGTGATCGGTCAATGTGTGTTATAAATAATATAATTTGGTCGTGTTTTTCGTTATAGAAGATGAAGTCATATAATGAATAAAAT
TTCTTAATCTAGCTTTATGATTCTAATTAACTAAGAATATTTTAATTAATTAGATGCCCG
Protein sequenceShow/hide protein sequence
MLKRSTSKMRNSKCNRILVSVNVVGSTGPIRFVANEDDLVCEVMKTTLTSYARLARLPTLGTNVDNFVLYCVNDGMDALSLREAIGAKQVRHFLLCKKEGTSHASLPKEN
GKNNWKTWLTKSLLTTYNIIAR