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CmoCh01G003960 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G003960
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:1950847..1951415
RNA-Seq ExpressionCmoCh01G003960
SyntenyCmoCh01G003960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607027.1 hypothetical protein SDJN03_00369, partial [Cucurbita argyrosperma subsp. sororia]6.2e-6098.31Show/hide
Query:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG
        MAATMPMKP TIAVVILLLVSTGCDAFA TKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG
Subjt:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG

Query:  KNNPPSENCDPFNRANPC
        KNNPPSENCDPFNRANPC
Subjt:  KNNPPSENCDPFNRANPC

KAG7036723.1 hypothetical protein SDJN02_00343, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-6098.31Show/hide
Query:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG
        MAATMPMKP TIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDID EFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG
Subjt:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG

Query:  KNNPPSENCDPFNRANPC
        KNNPPSENCDPFNRANPC
Subjt:  KNNPPSENCDPFNRANPC

XP_022143399.1 uncharacterized protein LOC111013278 [Momordica charantia]1.6e-2658.33Show/hide
Query:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNH-TQGPGKHVIGD-DIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLG
        MA    M PT +A+ ILL     CDA   +K L N+ T G  K +IGD DI +EFLME H+SR+LAE   LRF+TM +PN N+ SV DCERPPR+DSCLG
Subjt:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNH-TQGPGKHVIGD-DIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLG

Query:  EGKNNPPSENCDPFNRANPC
        E +N PP+ENC  FNRANPC
Subjt:  EGKNNPPSENCDPFNRANPC

XP_022948337.1 uncharacterized protein LOC111452043 [Cucurbita moschata]3.3e-61100Show/hide
Query:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG
        MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG
Subjt:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG

Query:  KNNPPSENCDPFNRANPC
        KNNPPSENCDPFNRANPC
Subjt:  KNNPPSENCDPFNRANPC

XP_022998176.1 uncharacterized protein LOC111492901 [Cucurbita maxima]1.2e-5896.61Show/hide
Query:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG
        MAATM MKP TIAVVILLLVST CDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPR+DSCLGEG
Subjt:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG

Query:  KNNPPSENCDPFNRANPC
        KNNPPSENCDPFNRANPC
Subjt:  KNNPPSENCDPFNRANPC

TrEMBL top hitse value%identityAlignment
A0A0A0L9X5 Uncharacterized protein1.4e-3668.38Show/hide
Query:  AATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGK
        AAT+ ++ TT+A+V LLLV+ GCDAF  +KP+FN +   GK +IG DIDT+FLMESH+SR+LA   ELRFETMR+PN N ASVV+CERPPR+DSCLGE +
Subjt:  AATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGK

Query:  NNPPSENCDPFNRANPC
        +NPPSENCDP+NRANPC
Subjt:  NNPPSENCDPFNRANPC

A0A6J1CP71 uncharacterized protein LOC1110132787.5e-2758.33Show/hide
Query:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNH-TQGPGKHVIGD-DIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLG
        MA    M PT +A+ ILL     CDA   +K L N+ T G  K +IGD DI +EFLME H+SR+LAE   LRF+TM +PN N+ SV DCERPPR+DSCLG
Subjt:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNH-TQGPGKHVIGD-DIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLG

Query:  EGKNNPPSENCDPFNRANPC
        E +N PP+ENC  FNRANPC
Subjt:  EGKNNPPSENCDPFNRANPC

A0A6J1G8W5 uncharacterized protein LOC1114520431.6e-61100Show/hide
Query:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG
        MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG
Subjt:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG

Query:  KNNPPSENCDPFNRANPC
        KNNPPSENCDPFNRANPC
Subjt:  KNNPPSENCDPFNRANPC

A0A6J1K9J3 uncharacterized protein LOC1114929015.7e-5996.61Show/hide
Query:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG
        MAATM MKP TIAVVILLLVST CDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPR+DSCLGEG
Subjt:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG

Query:  KNNPPSENCDPFNRANPC
        KNNPPSENCDPFNRANPC
Subjt:  KNNPPSENCDPFNRANPC

A0A6J1KBP5 uncharacterized protein LOC1114928541.8e-2556.3Show/hide
Query:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGD-DIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGE
        MAA   M P  +A++ILLL  T  DA    KPL N T   GK++IGD DID+EFLMESHISR+LA   +  F+T ++ + N AS   CERPPR+DSCLG+
Subjt:  MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGD-DIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGE

Query:  GKNNPPSENCDPFNRANPC
          NNPP ENC  FNR NPC
Subjt:  GKNNPPSENCDPFNRANPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAACTATGCCAATGAAACCCACCACCATAGCGGTCGTGATTTTGCTGCTCGTCTCGACCGGTTGCGATGCTTTTGCACTTACCAAACCACTTTTCAACCACAC
CCAAGGTCCCGGAAAACACGTCATCGGAGACGATATCGACACCGAGTTTCTTATGGAATCGCATATTAGTAGGGTACTTGCGGAGGAGGATGAGCTTAGGTTTGAAACCA
TGAGGAGCCCTAACCCCAACATTGCATCGGTGGTCGACTGCGAACGACCGCCACGCTTCGACAGTTGCCTCGGCGAAGGAAAGAACAATCCGCCGTCCGAAAACTGCGAT
CCCTTCAATCGGGCTAATCCTTGTTGA
mRNA sequenceShow/hide mRNA sequence
CTTCCGCCGTCGTCTTCCGTTACCGCCACCACCATGGCTGCAACTATGCCAATGAAACCCACCACCATAGCGGTCGTGATTTTGCTGCTCGTCTCGACCGGTTGCGATGC
TTTTGCACTTACCAAACCACTTTTCAACCACACCCAAGGTCCCGGAAAACACGTCATCGGAGACGATATCGACACCGAGTTTCTTATGGAATCGCATATTAGTAGGGTAC
TTGCGGAGGAGGATGAGCTTAGGTTTGAAACCATGAGGAGCCCTAACCCCAACATTGCATCGGTGGTCGACTGCGAACGACCGCCACGCTTCGACAGTTGCCTCGGCGAA
GGAAAGAACAATCCGCCGTCCGAAAACTGCGATCCCTTCAATCGGGCTAATCCTTGTTGATTAGAATGAAATGAAGAAGAATAAGTAGATATGTTGTTTGGGGTTTACAG
CATTTTTAAGGAATTAATAATGTAATGAACACATATTTAGTGCTCAC
Protein sequenceShow/hide protein sequence
MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCD
PFNRANPC