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CmoCh01G003970 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G003970
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:1952433..1952827
RNA-Seq ExpressionCmoCh01G003970
SyntenyCmoCh01G003970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607028.1 hypothetical protein SDJN03_00370, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4896.15Show/hide
Query:  MAAAALMIPAMIMVLLLNPTGCDTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNR
        MAAAALMI AMI++LLLNPTGCDTSDAKRSLVGDE+IESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNR
Subjt:  MAAAALMIPAMIMVLLLNPTGCDTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNR

Query:  EHPC
        EHPC
Subjt:  EHPC

KAG6607029.1 hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia]6.8e-2658.12Show/hide
Query:  MAAAALMIPA--MIMVLLLNPT-----------GCDTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR
        MAAAA++IPA   IM+LLLNPT             DTS A + L+GD+DI+SEFLM  HISR+LA SQ F+TS T++A + + G C RPPRYDSCLG+K 
Subjt:  MAAAALMIPA--MIMVLLLNPT-----------GCDTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR

Query:  STPPPENCGPFNREHPC
        + PPPENCG FNR +PC
Subjt:  STPPPENCGPFNREHPC

XP_022948338.1 uncharacterized protein LOC111452044 [Cucurbita moschata]1.2e-2557.26Show/hide
Query:  MAAAALMIPA--MIMVLLLNPT-----------GCDTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR
        MAAAA++IPA   IM+LLLNPT             DTS A + L+GD+D++SEFLM  HISR+LA SQ F+TS T++A + + G C RPPRYDSCLG+K 
Subjt:  MAAAALMIPA--MIMVLLLNPT-----------GCDTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR

Query:  STPPPENCGPFNREHPC
        + PPPENCG FNR +PC
Subjt:  STPPPENCGPFNREHPC

XP_022998105.1 uncharacterized protein LOC111492854 [Cucurbita maxima]8.0e-2758.97Show/hide
Query:  MAAAALMIPA--MIMVLLLNPTGC-----------DTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR
        MAAAA+MIPA   IM+LLLNPT             DTS A + L+GD+DI+SEFLM  HISR+LA SQ F+TS T++A + + G C+RPPRYDSCLG+K 
Subjt:  MAAAALMIPA--MIMVLLLNPTGC-----------DTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR

Query:  STPPPENCGPFNREHPC
        + PPPENCG FNR +PC
Subjt:  STPPPENCGPFNREHPC

XP_023523220.1 uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo]4.4e-2557.26Show/hide
Query:  MAAAALMIPA--MIMVLLLNPTGC-----------DTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR
        MA AA MIPA   IM+LLLNP              DTS A + L+GD+DI+SEFLM  HISR+LA SQ F+TS T++A + + G C RPPRYDSCLG+K 
Subjt:  MAAAALMIPA--MIMVLLLNPTGC-----------DTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR

Query:  STPPPENCGPFNREHPC
        + PPPENCG FNR +PC
Subjt:  STPPPENCGPFNREHPC

TrEMBL top hitse value%identityAlignment
A0A0A0L711 Uncharacterized protein2.8e-2554.7Show/hide
Query:  AAALMIPA--MIMVLLLNPTGC-------------DTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR
        A ALMIPA   +M+++L PT C              +    + +V +EDI+S F+M  HISR+LA+SQ FETS+T+NAT+ + GECDRPPRYDSCLG KR
Subjt:  AAALMIPA--MIMVLLLNPTGC-------------DTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR

Query:  STPPPENCGPFNREHPC
        +TPPP+NC  FNREHPC
Subjt:  STPPPENCGPFNREHPC

A0A0A0LCJ4 Uncharacterized protein5.8e-2350.42Show/hide
Query:  MAAAALMIPAMI--MVLLLN-PTGCD------------TSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGE
        M A+ALMIPA +  M+LLL+ P+ CD            +S   + ++G+ED+E EFLM  HISR+LA S+ ++T++T+NA + + G CDRPPRYDSCLG+
Subjt:  MAAAALMIPAMI--MVLLLN-PTGCD------------TSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGE

Query:  KRSTPPPENCGPFNREHPC
        KR+ PPP NC P+NR +PC
Subjt:  KRSTPPPENCGPFNREHPC

A0A6J1CP71 uncharacterized protein LOC1110132782.4e-2455.08Show/hide
Query:  MAAAALMIPAM--IMVLLLNPTGCD------------TSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEK
        MA AA+MIP +  + +LL NP  CD            T    + L+GDEDI SEFLM LH+SR+LAES  F+T  T NA   +V +C+RPPRYDSCLGEK
Subjt:  MAAAALMIPAM--IMVLLLNPTGCD------------TSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEK

Query:  RSTPPPENCGPFNREHPC
        R+TPP ENCG FNR +PC
Subjt:  RSTPPPENCGPFNREHPC

A0A6J1G927 uncharacterized protein LOC1114520445.6e-2657.26Show/hide
Query:  MAAAALMIPA--MIMVLLLNPT-----------GCDTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR
        MAAAA++IPA   IM+LLLNPT             DTS A + L+GD+D++SEFLM  HISR+LA SQ F+TS T++A + + G C RPPRYDSCLG+K 
Subjt:  MAAAALMIPA--MIMVLLLNPT-----------GCDTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR

Query:  STPPPENCGPFNREHPC
        + PPPENCG FNR +PC
Subjt:  STPPPENCGPFNREHPC

A0A6J1KBP5 uncharacterized protein LOC1114928543.9e-2758.97Show/hide
Query:  MAAAALMIPA--MIMVLLLNPTGC-----------DTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR
        MAAAA+MIPA   IM+LLLNPT             DTS A + L+GD+DI+SEFLM  HISR+LA SQ F+TS T++A + + G C+RPPRYDSCLG+K 
Subjt:  MAAAALMIPA--MIMVLLLNPTGC-----------DTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKR

Query:  STPPPENCGPFNREHPC
        + PPPENCG FNR +PC
Subjt:  STPPPENCGPFNREHPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGCCGCACTGATGATACCCGCCATGATCATGGTTCTGCTACTCAACCCAACTGGATGTGACACTTCCGATGCAAAGCGAAGCCTGGTTGGAGACGAAGACAT
CGAGTCGGAGTTTCTTATGTCGTTGCACATCAGCCGGGTGTTGGCGGAATCCCAAGGGTTCGAAACCAGCGCCACTAGCAACGCTACCGAACCTGCCGTCGGGGAATGCG
ACAGGCCGCCACGCTACGACAGCTGCCTTGGCGAGAAAAGAAGTACTCCGCCGCCGGAAAATTGTGGACCCTTCAATCGTGAACATCCCTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAGCCGCACTGATGATACCCGCCATGATCATGGTTCTGCTACTCAACCCAACTGGATGTGACACTTCCGATGCAAAGCGAAGCCTGGTTGGAGACGAAGACAT
CGAGTCGGAGTTTCTTATGTCGTTGCACATCAGCCGGGTGTTGGCGGAATCCCAAGGGTTCGAAACCAGCGCCACTAGCAACGCTACCGAACCTGCCGTCGGGGAATGCG
ACAGGCCGCCACGCTACGACAGCTGCCTTGGCGAGAAAAGAAGTACTCCGCCGCCGGAAAATTGTGGACCCTTCAATCGTGAACATCCCTGTTAG
Protein sequenceShow/hide protein sequence
MAAAALMIPAMIMVLLLNPTGCDTSDAKRSLVGDEDIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC