; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G003980 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G003980
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:1954772..1955470
RNA-Seq ExpressionCmoCh01G003980
SyntenyCmoCh01G003980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607029.1 hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5699.15Show/hide
Query:  MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS
        MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQD+DSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS
Subjt:  MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS

Query:  NNPPPENCGTFNRNNPC
        NNPPPENCGTFNRNNPC
Subjt:  NNPPPENCGTFNRNNPC

TYK01622.1 hypothetical protein E5676_scaffold451G002320 [Cucumis melo var. makuwa]6.2e-3668.91Show/hide
Query:  MAAAAVIIPAAMAIMILLLN-PTTSDALTSFKP-LNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQ
        M A+A +IPAA+  MILLLN P++ +ALT+F+P L+N TS   + ++G++D+D EF+MESHISRILA SQNFQT+ T DANKASGGGCGRPPRYDSCLGQ
Subjt:  MAAAAVIIPAAMAIMILLLN-PTTSDALTSFKP-LNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQ

Query:  KSNNPPPENCGTFNRNNPC
        K NNPPP NCGT+NR NPC
Subjt:  KSNNPPPENCGTFNRNNPC

XP_022948338.1 uncharacterized protein LOC111452044 [Cucurbita moschata]6.4e-57100Show/hide
Query:  MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS
        MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS
Subjt:  MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS

Query:  NNPPPENCGTFNRNNPC
        NNPPPENCGTFNRNNPC
Subjt:  NNPPPENCGTFNRNNPC

XP_022998105.1 uncharacterized protein LOC111492854 [Cucurbita maxima]5.1e-5494.87Show/hide
Query:  MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS
        MAAAAV+IPAAMAIMILLLNPT+SDALT+FKPLNNDTSAAGKYLIGDQD+DSEFLMESHISRILAGSQ+FQTSKTNDANKASGGGC RPPRYDSCLGQKS
Subjt:  MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS

Query:  NNPPPENCGTFNRNNPC
        NNPPPENCGTFNRNNPC
Subjt:  NNPPPENCGTFNRNNPC

XP_023523220.1 uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo]1.5e-5394.02Show/hide
Query:  MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS
        MA AA +IPAAMAIMILLLNP  SDALTSFKPLNNDTSAAGKYLIGDQD+DSEFLMESHISRILAGSQNFQTS TNDANKASGGGCGRPPRYDSCLGQKS
Subjt:  MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS

Query:  NNPPPENCGTFNRNNPC
        NNPPPENCGTFNRNNPC
Subjt:  NNPPPENCGTFNRNNPC

TrEMBL top hitse value%identityAlignment
A0A0A0L711 Uncharacterized protein7.2e-3061.54Show/hide
Query:  AAAVIIPAAMAIMILLLNPTT-SDALTSFKPLNNDTSAA-GKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS
        A A++IPAAMA+M+++L PT    ALTSFKPLNN TS    KY++ ++D+ S F+MESHISR+LA SQ+F+TS TN+A + S G C RPPRYDSCLG K 
Subjt:  AAAVIIPAAMAIMILLLNPTT-SDALTSFKPLNNDTSAA-GKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS

Query:  NNPPPENCGTFNRNNPC
        N PPP+NC TFNR +PC
Subjt:  NNPPPENCGTFNRNNPC

A0A0A0LCJ4 Uncharacterized protein6.9e-3363.87Show/hide
Query:  MAAAAVIIPAAMAIMILLLN-PTTSDALTSFKP-LNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQ
        M A+A++IPAA+  MILLL+ P++ DALT+F+P L+N +S  GK ++G++D++ EFLMESHISRILA S+N+QT+ T +ANKASGGGC RPPRYDSCLG+
Subjt:  MAAAAVIIPAAMAIMILLLN-PTTSDALTSFKP-LNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQ

Query:  KSNNPPPENCGTFNRNNPC
        K NNPPP NC  +NR NPC
Subjt:  KSNNPPPENCGTFNRNNPC

A0A5D3BS53 Uncharacterized protein3.0e-3668.91Show/hide
Query:  MAAAAVIIPAAMAIMILLLN-PTTSDALTSFKP-LNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQ
        M A+A +IPAA+  MILLLN P++ +ALT+F+P L+N TS   + ++G++D+D EF+MESHISRILA SQNFQT+ T DANKASGGGCGRPPRYDSCLGQ
Subjt:  MAAAAVIIPAAMAIMILLLN-PTTSDALTSFKP-LNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQ

Query:  KSNNPPPENCGTFNRNNPC
        K NNPPP NCGT+NR NPC
Subjt:  KSNNPPPENCGTFNRNNPC

A0A6J1G927 uncharacterized protein LOC1114520443.1e-57100Show/hide
Query:  MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS
        MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS
Subjt:  MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS

Query:  NNPPPENCGTFNRNNPC
        NNPPPENCGTFNRNNPC
Subjt:  NNPPPENCGTFNRNNPC

A0A6J1KBP5 uncharacterized protein LOC1114928542.5e-5494.87Show/hide
Query:  MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS
        MAAAAV+IPAAMAIMILLLNPT+SDALT+FKPLNNDTSAAGKYLIGDQD+DSEFLMESHISRILAGSQ+FQTSKTNDANKASGGGC RPPRYDSCLGQKS
Subjt:  MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKS

Query:  NNPPPENCGTFNRNNPC
        NNPPPENCGTFNRNNPC
Subjt:  NNPPPENCGTFNRNNPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGCGGCGGTGATCATACCTGCCGCCATGGCGATCATGATTCTACTGCTCAACCCAACTACTTCCGATGCTCTTACATCTTTCAAACCACTCAACAACGACAC
TTCCGCTGCCGGAAAGTACCTCATCGGAGACCAAGACCTCGACTCAGAGTTTCTAATGGAATCGCACATCAGCCGGATCCTAGCAGGCTCCCAAAACTTCCAAACCAGCA
AAACTAACGACGCCAACAAAGCTTCTGGCGGCGGCTGCGGGCGGCCGCCGCGTTATGACAGTTGCCTCGGCCAGAAATCAAACAATCCGCCGCCGGAAAATTGTGGGACC
TTCAACCGCAATAATCCCTGTTAG
mRNA sequenceShow/hide mRNA sequence
CACATCCCAATCGCTTCCTCCGCCGCCATCGCCACCAGCAACCCACCCACGGCAATGGCTGCAGCGGCGGTGATCATACCTGCCGCCATGGCGATCATGATTCTACTGCT
CAACCCAACTACTTCCGATGCTCTTACATCTTTCAAACCACTCAACAACGACACTTCCGCTGCCGGAAAGTACCTCATCGGAGACCAAGACCTCGACTCAGAGTTTCTAA
TGGAATCGCACATCAGCCGGATCCTAGCAGGCTCCCAAAACTTCCAAACCAGCAAAACTAACGACGCCAACAAAGCTTCTGGCGGCGGCTGCGGGCGGCCGCCGCGTTAT
GACAGTTGCCTCGGCCAGAAATCAAACAATCCGCCGCCGGAAAATTGTGGGACCTTCAACCGCAATAATCCCTGTTAGAAAAGGACAATCCATAGATCACAAAGCTTATG
ATCTCTCAACAACAATGTAATGTCTCAATTGTTTACCTCTTTCATTTAATTTCGATTGTGTTCTTCATGTATTGCGTTTTTTTTTTAATTTTTAATTTCAATAAAATATT
TTTCCAACGTTTAATTCTAATTTGTTTAAAAATTATATCATCATAT
Protein sequenceShow/hide protein sequence
MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGT
FNRNNPC