; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G004040 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G004040
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:1974724..1975506
RNA-Seq ExpressionCmoCh01G004040
SyntenyCmoCh01G004040
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607033.1 hypothetical protein SDJN03_00375, partial [Cucurbita argyrosperma subsp. sororia]4.1e-7597.97Show/hide
Query:  RGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMP
        +GYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMP
Subjt:  RGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDEKLSSPMP

Query:  VLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL
        VLAAAAYSPLSLSSPSSAGSHKGGGG  ARMTFGLKPAAVRVEGFDCL
Subjt:  VLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL

XP_011651371.1 uncharacterized protein LOC101218020 [Cucumis sativus]2.7e-6683.03Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP
        MN FI QQNTF SCEETRG+ASISDLKDPVVCPKPRRLAILANNHIK PL+WHQ E CDSKAGADLLDIIL KGSEQSS +VASSPPF+ GSPPSRASNP
Subjt:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP

Query:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL
        LIQDA+F DEKL SPMP L   AYSP  LSSPSSA S   GGGC ARM FGLKPAAVRVEGFDCL
Subjt:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL

XP_022948961.1 uncharacterized protein LOC111452452 [Cucurbita moschata]4.3e-88100Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP
        MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP
Subjt:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP

Query:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL
        LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL
Subjt:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL

XP_022997677.1 uncharacterized protein LOC111492569 [Cucurbita maxima]7.5e-8596.97Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP
        MNQFIFQQNTF+SCEETRGYASISDLK+PVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP
Subjt:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP

Query:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL
        LIQDA+FRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGG  ARMTFGLKPAAVRVEGFDCL
Subjt:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL

XP_023524595.1 uncharacterized protein LOC111788490 [Cucurbita pepo subsp. pepo]4.1e-8395.24Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP
        MNQFIFQQNTFFSCEET GYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSS+NVASSPPFYCGSPPSRASNP
Subjt:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP

Query:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSA---GSHKGGGGCAARMTFGLKPAAVRVEGFDCL
        LIQDA+FRDEKLSSPMPVLAAAAYSPLSLSSPSSA   GSHKGGGG  ARMTFGLKPAAVRVEGFDCL
Subjt:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSA---GSHKGGGGCAARMTFGLKPAAVRVEGFDCL

TrEMBL top hitse value%identityAlignment
A0A0A0L9U7 Uncharacterized protein1.3e-6683.03Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP
        MN FI QQNTF SCEETRG+ASISDLKDPVVCPKPRRLAILANNHIK PL+WHQ E CDSKAGADLLDIIL KGSEQSS +VASSPPF+ GSPPSRASNP
Subjt:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP

Query:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL
        LIQDA+F DEKL SPMP L   AYSP  LSSPSSA S   GGGC ARM FGLKPAAVRVEGFDCL
Subjt:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL

A0A1S3CF27 uncharacterized protein LOC1035001582.9e-6683.03Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP
        MN FI QQNTF SCEETRG+ASISDLKDPVVCPKPRRLAILANNHIK PL+WHQ E CDSKAGADLLDIIL KGSEQSS +VASSPPF+ GSPPSRASNP
Subjt:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP

Query:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL
        LIQDA+F DEKL SPMP L   AYSP  LSSPSSA S   GGGC ARM FGLKPAAVRVEGFDCL
Subjt:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL

A0A5A7V5L2 Uncharacterized protein1.3e-6683.03Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP
        MN FI QQNTF SCEETRG+ASISDLKDPVVCPKPRRLAILANNHIK PL+WHQ E CDSKAGADLLDIIL KGSEQSS +VASSPPF+ GSPPSRASNP
Subjt:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP

Query:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL
        LIQDA+F DEKL SPMP L   AYSP  LSSPSSA S   GGGC ARM FGLKPAAVRVEGFDCL
Subjt:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL

A0A6J1GAN1 uncharacterized protein LOC1114524522.1e-88100Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP
        MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP
Subjt:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP

Query:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL
        LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL
Subjt:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL

A0A6J1K5S1 uncharacterized protein LOC1114925693.6e-8596.97Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP
        MNQFIFQQNTF+SCEETRGYASISDLK+PVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP
Subjt:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNP

Query:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL
        LIQDA+FRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGG  ARMTFGLKPAAVRVEGFDCL
Subjt:  LIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein4.9e-2642.44Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKW---HQAEACDSKAGADLLDIILNK----GSEQSSINVASSPP-FYCGS
        MN    QQN F   EE R  A++SD +D V+CPKPRR+  L N+H    L+W   HQ E C+S +G+++LD IL K    G EQ       +PP F+ GS
Subjt:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKW---HQAEACDSKAGADLLDIILNK----GSEQSSINVASSPP-FYCGS

Query:  PPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDC
        PPSR SNPL +D+ FR+E L     ++A+ + S    + P    S + G    A  +FG  P  VRV GFDC
Subjt:  PPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDC

AT1G13390.2 unknown protein4.9e-2642.44Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKW---HQAEACDSKAGADLLDIILNK----GSEQSSINVASSPP-FYCGS
        MN    QQN F   EE R  A++SD +D V+CPKPRR+  L N+H    L+W   HQ E C+S +G+++LD IL K    G EQ       +PP F+ GS
Subjt:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKW---HQAEACDSKAGADLLDIILNK----GSEQSSINVASSPP-FYCGS

Query:  PPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDC
        PPSR SNPL +D+ FR+E L     ++A+ + S    + P    S + G    A  +FG  P  VRV GFDC
Subjt:  PPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDC

AT1G68490.1 unknown protein3.1e-2847.19Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASISDL---KDPVVCPKPRRLAILANNHIKHPLK------WHQAEACDSKAGADLLDIILNK---GSEQSSINVASSP-P
        MN F  Q N F +  + R  +S+S +   +  VVCPKPRR+ +  N+H  HP +       HQ E C+SKA  D+LDIIL K   G+EQ +  V  SP P
Subjt:  MNQFIFQQNTFFSCEETRGYASISDL---KDPVVCPKPRRLAILANNHIKHPLK------WHQAEACDSKAGADLLDIILNK---GSEQSSINVASSP-P

Query:  FYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL
        F CGSPPSR +NPL QDA+FRDE +S    +       P   SSPSS+   K  GGC  R  FG  P  VRVEGFDCL
Subjt:  FYCGSPPSRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCL

AT3G02555.1 unknown protein1.1e-3050.54Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASI-SDLKDPVVCPKPRRLAILANNHIKHPLKWHQA-----EACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPP
        MN    QQN F S EE+RG+  I S   D VVCPKPRR    ANN I+ P + H +     + CDSKAG DLLDI   K S  S      SPPF+ GSPP
Subjt:  MNQFIFQQNTFFSCEETRGYASI-SDLKDPVVCPKPRRLAILANNHIKHPLKWHQA-----EACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPP

Query:  SRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCLKNGEWQQSFQPQA
        SRA+NPL QDA+F DEKL++  P L     SPL L S S   S     GC  RM FG+KPA VRVEGFDCL       S    A
Subjt:  SRASNPLIQDAQFRDEKLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCLKNGEWQQSFQPQA

AT5G16110.1 unknown protein2.6e-3550.27Show/hide
Query:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEA----CDSKAGADLLDIILNKGSEQSSIN--VASSPPFYCGSPP
        MN    QQN F S EE  G+    D KD VVCPKPRR+ +LANN I+ PL+ H ++A    CDSKAGA+LL+II  K  +  +I   ++SSPP++ GSPP
Subjt:  MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEA----CDSKAGADLLDIILNKGSEQSSIN--VASSPPFYCGSPP

Query:  SRASNPLIQDAQFRDEKLSSPMPVLA-AAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCLKNGEWQQSFQPQA
        SRA+NPL QDA+FRDEKL+   P       YS     SPSS+ S     GC  RM FGL   AVRVEGFDCL       S    A
Subjt:  SRASNPLIQDAQFRDEKLSSPMPVLA-AAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCLKNGEWQQSFQPQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAATTCATTTTTCAGCAGAACACCTTTTTTTCATGTGAAGAGACAAGGGGGTATGCCTCTATCTCTGATCTGAAGGACCCTGTTGTGTGTCCCAAGCCCCGGCG
GCTTGCAATTCTTGCTAACAATCACATTAAACACCCCTTGAAATGGCACCAAGCTGAGGCTTGTGATTCAAAAGCTGGGGCAGACCTTCTAGACATCATTTTAAACAAGG
GGTCGGAACAATCTAGCATCAATGTGGCGTCATCACCTCCGTTTTATTGCGGGTCTCCGCCGAGCAGAGCTTCCAATCCATTAATCCAGGATGCGCAGTTTAGAGATGAG
AAACTCAGTAGTCCTATGCCAGTATTGGCTGCAGCAGCATATTCCCCATTGAGTCTCTCGTCGCCATCATCGGCGGGGTCGCACAAAGGGGGAGGAGGGTGTGCTGCGAG
AATGACGTTCGGTCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTTGATTGCCTGAAGAATGGAGAGTGGCAGCAGAGTTTTCAACCACAGGCAAGACAACACTACTTTT
GTAACAAGCAGAGGAAGCAATATTTCACGATAGGGATGCATGAGAATTTGAGATCATCCACGTCTCAAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCAATTCATTTTTCAGCAGAACACCTTTTTTTCATGTGAAGAGACAAGGGGGTATGCCTCTATCTCTGATCTGAAGGACCCTGTTGTGTGTCCCAAGCCCCGGCG
GCTTGCAATTCTTGCTAACAATCACATTAAACACCCCTTGAAATGGCACCAAGCTGAGGCTTGTGATTCAAAAGCTGGGGCAGACCTTCTAGACATCATTTTAAACAAGG
GGTCGGAACAATCTAGCATCAATGTGGCGTCATCACCTCCGTTTTATTGCGGGTCTCCGCCGAGCAGAGCTTCCAATCCATTAATCCAGGATGCGCAGTTTAGAGATGAG
AAACTCAGTAGTCCTATGCCAGTATTGGCTGCAGCAGCATATTCCCCATTGAGTCTCTCGTCGCCATCATCGGCGGGGTCGCACAAAGGGGGAGGAGGGTGTGCTGCGAG
AATGACGTTCGGTCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTTGATTGCCTGAAGAATGGAGAGTGGCAGCAGAGTTTTCAACCACAGGCAAGACAACACTACTTTT
GTAACAAGCAGAGGAAGCAATATTTCACGATAGGGATGCATGAGAATTTGAGATCATCCACGTCTCAAGTGTAG
Protein sequenceShow/hide protein sequence
MNQFIFQQNTFFSCEETRGYASISDLKDPVVCPKPRRLAILANNHIKHPLKWHQAEACDSKAGADLLDIILNKGSEQSSINVASSPPFYCGSPPSRASNPLIQDAQFRDE
KLSSPMPVLAAAAYSPLSLSSPSSAGSHKGGGGCAARMTFGLKPAAVRVEGFDCLKNGEWQQSFQPQARQHYFCNKQRKQYFTIGMHENLRSSTSQV