; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G004280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G004280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionchloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like
Genome locationCmo_Chr01:2098669..2102376
RNA-Seq ExpressionCmoCh01G004280
SyntenyCmoCh01G004280
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR001328 - Peptidyl-tRNA hydrolase
IPR018171 - Peptidyl-tRNA hydrolase, conserved site
IPR036416 - Peptidyl-tRNA hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607055.1 Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.4e-14099.6Show/hide
Query:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI
        MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIGI
Subjt:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL

Query:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
        QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
Subjt:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

KAG7036756.1 Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]7.5e-14099.19Show/hide
Query:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI
        MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIGI
Subjt:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL
        GSIG+VPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL

Query:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
        QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
Subjt:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

XP_022948563.1 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita moschata]1.2e-140100Show/hide
Query:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI
        MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI
Subjt:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL

Query:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
        QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
Subjt:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

XP_022998092.1 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita maxima]3.2e-13898.39Show/hide
Query:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI
        MLYAASVPSVCLFSNSS AHFPSRFPKRLVPTRLSVRASL DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIGI
Subjt:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMD+KAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL

Query:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
        QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
Subjt:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

XP_023523313.1 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like [Cucurbita pepo subsp. pepo]7.5e-14099.19Show/hide
Query:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI
        MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIGI
Subjt:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMD+KAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL

Query:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
        QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
Subjt:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

TrEMBL top hitse value%identityAlignment
A0A0A0LCC6 Uncharacterized protein4.5e-12288.76Show/hide
Query:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDND-NGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIG
        ML+AAS  SV LFSNSS AHF     K LV TRLSVRAS PD+D NG+KVEYTPWLIVGLGNPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIG
Subjt:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDND-NGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIG

Query:  IGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFL
        IGSIGEVPILLAKPQTYMNFCGESVGPLA HYQIPLRH+LL YDEM+LPNGVLRLQPK GHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMD+KAFL
Subjt:  IGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFL

Query:  LQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
        LQKFSSVERKQIDAALEQGVEAVRTLAL GFS+ V+RFNL+QKYKYHKV
Subjt:  LQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

A0A1S3CFG5 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic4.3e-12590.8Show/hide
Query:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLP--DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALI
        MLYAAS  SV LFSNSS AH+ S   K LV TRLSVRASLP  DN+NGVKVEYTPWLIVGLGNPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALI
Subjt:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLP--DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALI

Query:  GIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAF
        GIGSIGEVPILLAKPQTYMNFCGESVGPLA HYQIPLRHILL YDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMD+KAF
Subjt:  GIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAF

Query:  LLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
        LLQKFSSVERKQIDAALEQGVEAVRTLAL GFS+ V+RFNL+QKYKYHKV
Subjt:  LLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

A0A6J1D2Z6 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like9.3e-12892.34Show/hide
Query:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI
        MLYA SV SVCL SNSS AHF  R  KRLVPTRLSVRASL DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGF+MIDSIAQAQ ILMNTIQSKALIGI
Subjt:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLA HYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMD+KAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL

Query:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
        QKF SVERKQIDAALEQGVEAVRTLAL GFS+ V+RFNLTQKYKY+KV
Subjt:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

A0A6J1G9M7 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like5.6e-141100Show/hide
Query:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI
        MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI
Subjt:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL

Query:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
        QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
Subjt:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

A0A6J1K6X4 chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like1.5e-13898.39Show/hide
Query:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI
        MLYAASVPSVCLFSNSS AHFPSRFPKRLVPTRLSVRASL DNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGF+MIDSIAQAQGILMNTIQSKALIGI
Subjt:  MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGI

Query:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL
        GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMD+KAFLL
Subjt:  GSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLL

Query:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
        QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
Subjt:  QKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

SwissProt top hitse value%identityAlignment
Q5ZCL8 Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic1.1e-8871.3Show/hide
Query:  RLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQ
        R++V AS+PD       EYTPWLI GLGNPG+KYHGTRHNVGF+M+D IA+ +GI MNTIQSK+L+GIGSIGEVP+LL KPQ+Y+N+ GE++GPLA +YQ
Subjt:  RLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQ

Query:  IPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSK
        +PLRHIL++YDEMSLPNGVLRLQ KGGHG HNG+++VM  LD  RE PRL IGIG+PPG MD +AFLLQKFSS ER QID ALEQGV+AVRTL LKGFS 
Subjt:  IPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSK

Query:  GVDRFNLTQKYKYHKV
         ++RFNL QKYK+H V
Subjt:  GVDRFNLTQKYKYHKV

Q6NLS8 Peptidyl-tRNA hydrolase, mitochondrial3.7e-6558.38Show/hide
Query:  YTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNG
        + PWL +GLGNPG+KY GTRHN+GF+MID  A++ GI MN +  KA++G G + ++P++LAKPQTYMN  GES GPLA +Y++PL  +L+V+D+M LP G
Subjt:  YTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNG

Query:  VLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHK
        VLRLQ KGGHG HNG+KSVM H  G REF RL IGIG PPG MD KAFLLQKFS   R+++D AL +GV+A++ +  K F +    FN+ QKYK+ K
Subjt:  VLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHK

Q9FKN4 Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic7.4e-9073.49Show/hide
Query:  SVRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQI
        S+RASLP +DN  +K EYTPWLIVGLGNPG KY+GTRHN+GF+MID IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLA +YQI
Subjt:  SVRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQI

Query:  PLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKG
        PLRHIL++YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MD+KAFLLQKFS +ERKQ+D  LEQGVE V+TL  +GFS  
Subjt:  PLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKG

Query:  VDRFNLTQKYKYHKV
        + RFNL QKYK+HKV
Subjt:  VDRFNLTQKYKYHKV

Q9LF14 Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic6.9e-9669.87Show/hide
Query:  VCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPIL
        +C     S+ HF ++ P           ++    D+  KVEYTPWLIVGLGNPGNKYHGTRHNVGF+MID +A+ +G+LMNTIQSKALIGIG+I +VPIL
Subjt:  VCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPIL

Query:  LAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERK
        LAKPQTYMNF GESVG LA HY++PLRHIL++YDEM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MD+KAFLLQKFS +E+K
Subjt:  LAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERK

Query:  QIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
        QI+ ALEQG EAV+TL L GF++G+ RFNL QKYK+HKV
Subjt:  QIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

Q9M5P4 Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic3.6e-9265.37Show/hide
Query:  LYAASVPSVCLFSNSSIAHFPS-RFPKRLV---------PTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNT
        L AA++PS    S+ S    PS R P++ +         P   +V +S+PD   G  VEYTPWLI GLGNPGNKY+GTRHNVGF+M+D IA  +GI MNT
Subjt:  LYAASVPSVCLFSNSSIAHFPS-RFPKRLV---------PTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNT

Query:  IQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPG
        IQSK+L+GIGSIGEVP+L+ KPQ+YMN+ GE++GPLA +YQ+PLRHILL+YD+ SLPNGVLRLQ KGGHG HNG+++V+ HLDGRREFPRL IGIG+PPG
Subjt:  IQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPG

Query:  TMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
         MD +AFLLQKFSS ER QID ALEQGV+AVRTL LKGFS   +RFNL QKYK+H+V
Subjt:  TMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

Arabidopsis top hitse value%identityAlignment
AT5G16140.1 Peptidyl-tRNA hydrolase family protein4.9e-9769.87Show/hide
Query:  VCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPIL
        +C     S+ HF ++ P           ++    D+  KVEYTPWLIVGLGNPGNKYHGTRHNVGF+MID +A+ +G+LMNTIQSKALIGIG+I +VPIL
Subjt:  VCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPIL

Query:  LAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERK
        LAKPQTYMNF GESVG LA HY++PLRHIL++YDEM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MD+KAFLLQKFS +E+K
Subjt:  LAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERK

Query:  QIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
        QI+ ALEQG EAV+TL L GF++G+ RFNL QKYK+HKV
Subjt:  QIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

AT5G16140.2 Peptidyl-tRNA hydrolase family protein4.9e-9769.87Show/hide
Query:  VCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPIL
        +C     S+ HF ++ P           ++    D+  KVEYTPWLIVGLGNPGNKYHGTRHNVGF+MID +A+ +G+LMNTIQSKALIGIG+I +VPIL
Subjt:  VCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPIL

Query:  LAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERK
        LAKPQTYMNF GESVG LA HY++PLRHIL++YDEM+LPNGVLRLQPKGG G+HNGVKSVMGHLDGRR FPRL IGIG PPG MD+KAFLLQKFS +E+K
Subjt:  LAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERK

Query:  QIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV
        QI+ ALEQG EAV+TL L GF++G+ RFNL QKYK+HKV
Subjt:  QIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHKV

AT5G19830.1 Peptidyl-tRNA hydrolase family protein2.6e-6658.38Show/hide
Query:  YTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNG
        + PWL +GLGNPG+KY GTRHN+GF+MID  A++ GI MN +  KA++G G + ++P++LAKPQTYMN  GES GPLA +Y++PL  +L+V+D+M LP G
Subjt:  YTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNG

Query:  VLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHK
        VLRLQ KGGHG HNG+KSVM H  G REF RL IGIG PPG MD KAFLLQKFS   R+++D AL +GV+A++ +  K F +    FN+ QKYK+ K
Subjt:  VLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKGVDRFNLTQKYKYHK

AT5G38290.1 Peptidyl-tRNA hydrolase family protein5.3e-9173.49Show/hide
Query:  SVRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQI
        S+RASLP +DN  +K EYTPWLIVGLGNPG KY+GTRHN+GF+MID IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLA +YQI
Subjt:  SVRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQI

Query:  PLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKG
        PLRHIL++YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MD+KAFLLQKFS +ERKQ+D  LEQGVE V+TL  +GFS  
Subjt:  PLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKG

Query:  VDRFNLTQKYKYHKV
        + RFNL QKYK+HKV
Subjt:  VDRFNLTQKYKYHKV

AT5G38290.2 Peptidyl-tRNA hydrolase family protein5.3e-9173.49Show/hide
Query:  SVRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQI
        S+RASLP +DN  +K EYTPWLIVGLGNPG KY+GTRHN+GF+MID IA+A  I MNTIQSKAL+GIGS+GEVPILL KPQ YMNF GESVGPLA +YQI
Subjt:  SVRASLPDNDNG-VKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAVHYQI

Query:  PLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKG
        PLRHIL++YD+M L NGVLRLQPKGGH  HNG+K+V  HL+G R +PRL IGIGNPPG MD+KAFLLQKFS +ERKQ+D  LEQGVE V+TL  +GFS  
Subjt:  PLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVEAVRTLALKGFSKG

Query:  VDRFNLTQKYKYHKV
        + RFNL QKYK+HKV
Subjt:  VDRFNLTQKYKYHKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATATGCAGCATCGGTCCCAAGTGTTTGCTTATTTTCCAATTCGAGCATTGCCCATTTCCCTTCTAGATTCCCAAAGCGTCTGGTTCCGACGAGGCTTTCTGTACG
AGCTTCATTGCCAGATAATGATAATGGCGTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGGGTAACCCAGGGAATAAGTACCATGGGACTCGGCACAATGTTG
GTTTTGACATGATCGATAGCATTGCTCAGGCGCAGGGCATTTTGATGAACACAATACAATCCAAAGCCTTGATTGGAATAGGTTCAATCGGAGAAGTACCAATTCTGTTG
GCAAAGCCTCAGACTTACATGAATTTCTGTGGAGAATCGGTTGGACCTCTTGCTGTACATTATCAAATACCTTTACGTCACATCTTGTTGGTTTATGATGAAATGAGCTT
GCCAAATGGCGTTCTTAGGCTCCAGCCAAAGGGAGGCCACGGCCATCATAATGGGGTGAAGAGTGTAATGGGACATCTGGATGGCCGACGTGAGTTTCCTCGGTTATGCA
TCGGAATTGGGAACCCACCTGGGACTATGGACATCAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTTGAGCGAAAACAGATCGATGCAGCACTAGAACAAGGGGTTGAG
GCAGTGAGAACCCTTGCACTGAAAGGATTCAGCAAAGGAGTCGACAGATTCAACTTGACCCAGAAATACAAGTATCACAAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
AATGCTTCCCAGCTGAATTTCCAGAATAGCCTCCGGAACAATACGATAGGGTGTCTTCTTCTTCTACGCCATTAACAGCGTCCACAGCTGCTACTGTTCACCCAAATCAA
CTCCTCTTTCAACCAAACCATCCAATTTACGCGCAGGTTTCAATGTTATATGCAGCATCGGTCCCAAGTGTTTGCTTATTTTCCAATTCGAGCATTGCCCATTTCCCTTC
TAGATTCCCAAAGCGTCTGGTTCCGACGAGGCTTTCTGTACGAGCTTCATTGCCAGATAATGATAATGGCGTTAAAGTGGAGTATACTCCTTGGCTTATTGTTGGACTGG
GTAACCCAGGGAATAAGTACCATGGGACTCGGCACAATGTTGGTTTTGACATGATCGATAGCATTGCTCAGGCGCAGGGCATTTTGATGAACACAATACAATCCAAAGCC
TTGATTGGAATAGGTTCAATCGGAGAAGTACCAATTCTGTTGGCAAAGCCTCAGACTTACATGAATTTCTGTGGAGAATCGGTTGGACCTCTTGCTGTACATTATCAAAT
ACCTTTACGTCACATCTTGTTGGTTTATGATGAAATGAGCTTGCCAAATGGCGTTCTTAGGCTCCAGCCAAAGGGAGGCCACGGCCATCATAATGGGGTGAAGAGTGTAA
TGGGACATCTGGATGGCCGACGTGAGTTTCCTCGGTTATGCATCGGAATTGGGAACCCACCTGGGACTATGGACATCAAAGCTTTTCTCCTGCAGAAGTTCAGTTCAGTT
GAGCGAAAACAGATCGATGCAGCACTAGAACAAGGGGTTGAGGCAGTGAGAACCCTTGCACTGAAAGGATTCAGCAAAGGAGTCGACAGATTCAACTTGACCCAGAAATA
CAAGTATCACAAGGTTTGATCCTATGGGAAAATAAAATTGTTCGAGTTTTGATCATATGTAATAAGCTAATAGAATGATTGACTGTTCATCGATGTACACGAGAAAATCA
GAAATGAAATAGACAAAATGAAGGTCGGGGGTATTGATGATCTTATGAATATGAAATCTTGGTTGCATCGACCGTAAAGATTTGAAC
Protein sequenceShow/hide protein sequence
MLYAASVPSVCLFSNSSIAHFPSRFPKRLVPTRLSVRASLPDNDNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFDMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILL
AKPQTYMNFCGESVGPLAVHYQIPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDIKAFLLQKFSSVERKQIDAALEQGVE
AVRTLALKGFSKGVDRFNLTQKYKYHKV