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CmoCh01G004470 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G004470
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:2156783..2159366
RNA-Seq ExpressionCmoCh01G004470
SyntenyCmoCh01G004470
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]1.5e-6198.41Show/hide
Query:  MGHSSNSGAVM-AAAAAAMGVFILMLSGSHCSVASPTPSSYGNITVAAAASMWCDGRVEECVTREGDGESAFPSLLASTPKFISFPTRNRNKPVCERPGD
        MGHSSNSGAVM AAAAAAMGVFILMLSGSHCSVASPTPSSYGNITVAAAASMWCDGRVEECVTRE DGESAFPSLLASTPKFISFPTRNRNKPVCERPGD
Subjt:  MGHSSNSGAVM-AAAAAAMGVFILMLSGSHCSVASPTPSSYGNITVAAAASMWCDGRVEECVTREGDGESAFPSLLASTPKFISFPTRNRNKPVCERPGD

Query:  YKSCFNARRTNTKNDNCGTYGRACRR
        YKSCFNARRTNTKNDNCGTYGRACRR
Subjt:  YKSCFNARRTNTKNDNCGTYGRACRR
KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]6.7e-4174.8Show/hide
Query:  MGHSSNSGAVMAAAAAAMGVFILMLSGSHCSVASPTPSSYGNITVAAAASMWCDGRVEECVTREGDGESAFPSLLASTPKFISFPTRNRNKPVCERPGDY
        MGHSSNSG VM  AAAAMGVFIL+LSGS C+VASPTPSSYGN TVAAAASMWCDGRVEECVTREGD  SAFPSL  ST K+IS  + N NK VCERP +Y
Subjt:  MGHSSNSGAVMAAAAAAMGVFILMLSGSHCSVASPTPSSYGNITVAAAASMWCDGRVEECVTREGDGESAFPSLLASTPKFISFPTRNRNKPVCERPGDY

Query:  KSCFNARRTNTKNDNCGTYGRAC
        +SCFN RR+N   +NCG Y R C
Subjt:  KSCFNARRTNTKNDNCGTYGRAC
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACATTCGTCAAACTCCGGAGGCGTAATGGCGGCGGCGGCGGCGGCGGCAATGGGCGTCTTCATTTTGGTGCTGAGCGGAAGTGATTGCAACGTTGCTTCTCCAAC
TCCTTCCAGTTATGGCAACAACACCGTGGCCGCTGCGGCATCGATGTGGTGCGATGGCCGCGTCGAAGAATGCGTCACACGAGAAGGCGACAGCGCGTCCGCATTCCCAA
GCCTGCAAACCTCTACACATCCCAATTCCATGGGACATTCCTCAAACTCCGGAGCCGTAATGGCGGCGGCGGCGGCGGCAATGGGCGTCTTCATTTTGATGCTGAGCGGA
AGTCATTGCAGCGTTGCTTCTCCAACTCCTTCCAGTTATGGCAACATCACCGTGGCCGCTGCCGCATCGATGTGGTGCGATGGCCGTGTCGAAGAATGCGTCACACGAGA
AGGCGACGGCGAGTCGGCATTCCCAAGCTTGCTAGCCTCTACACCTAAGTTTATCAGTTTTCCGACGAGAAATCGGAATAAACCTGTGTGTGAGCGACCGGGAGATTATA
AAAGCTGTTTCAATGCAAGGCGTACAAACACCAAGAACGACAATTGTGGCACATATGGTCGCGCCTGTCGAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACATTCGTCAAACTCCGGAGGCGTAATGGCGGCGGCGGCGGCGGCGGCAATGGGCGTCTTCATTTTGGTGCTGAGCGGAAGTGATTGCAACGTTGCTTCTCCAAC
TCCTTCCAGTTATGGCAACAACACCGTGGCCGCTGCGGCATCGATGTGGTGCGATGGCCGCGTCGAAGAATGCGTCACACGAGAAGGCGACAGCGCGTCCGCATTCCCAA
GCCTGCAAACCTCTACACATCCCAATTCCATGGGACATTCCTCAAACTCCGGAGCCGTAATGGCGGCGGCGGCGGCGGCAATGGGCGTCTTCATTTTGATGCTGAGCGGA
AGTCATTGCAGCGTTGCTTCTCCAACTCCTTCCAGTTATGGCAACATCACCGTGGCCGCTGCCGCATCGATGTGGTGCGATGGCCGTGTCGAAGAATGCGTCACACGAGA
AGGCGACGGCGAGTCGGCATTCCCAAGCTTGCTAGCCTCTACACCTAAGTTTATCAGTTTTCCGACGAGAAATCGGAATAAACCTGTGTGTGAGCGACCGGGAGATTATA
AAAGCTGTTTCAATGCAAGGCGTACAAACACCAAGAACGACAATTGTGGCACATATGGTCGCGCCTGTCGAAGGTAA
Protein sequenceShow/hide protein sequence
MGHSSNSGGVMAAAAAAAMGVFILVLSGSDCNVASPTPSSYGNNTVAAAASMWCDGRVEECVTREGDSASAFPSLQTSTHPNSMGHSSNSGAVMAAAAAAMGVFILMLSG
SHCSVASPTPSSYGNITVAAAASMWCDGRVEECVTREGDGESAFPSLLASTPKFISFPTRNRNKPVCERPGDYKSCFNARRTNTKNDNCGTYGRACRR