CuGenDBv2

Gene ID	CmoCh01G004520
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Aluminium induced protein with YGL and LRDR motifs
Genome location	Cmo_Chr01:2169885..2172243
RNA-Seq Expression	CmoCh01G004520
Synteny	CmoCh01G004520
Gene Ontology terms	GO:0008152 - metabolic process (biological process) GO:0016740 - transferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

GER31874.1 aluminium induced protein with YGL and LRDR motifs [Striga asiatica]

5.4e-07

58.18

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Query:  VEIIPSFNPSHHGIGQLVEVRINFAELVLDLFGQLNVALLDSGAIFWKNNLLEEW
        VE++PS NP HHG+ QL EVRIN  + VLDL GQLNVA+LD  A F K++    W
Subjt:  VEIIPSFNPSHHGIGQLVEVRINFAELVLDLFGQLNVALLDSGAIFWKNNLLEEW

GEZ02070.1 alpha-1,4-glucan-protein synthase [UDP-forming] 1-like [Tanacetum cinerariifolium]

5.1e-05

54.55

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Query:  ALLDSGAIFWKNNLLEEWDDVFLPENALVLLPQVHKWVACLAMVDVRQPCLHSQP
        A L   A FWKN +LEE D  FLP+ ALV   +VHKWVACLA+ +V Q  L  +P
Subjt:  ALLDSGAIFWKNNLLEEWDDVFLPENALVLLPQVHKWVACLAMVDVRQPCLHSQP

OAY69240.1 putative tRNA (guanine(26)-N(2))-dimethyltransferase 2, partial [Ananas comosus]

2.3e-05

48.53

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Query:  QLVEVRINFAELVLDLFGQLNVALLDSGAIFWKNNLLEEWDDVFLPENALVLLPQVHKWVACLAMVDV
        QLVEV +N +EL+  L  +L VALL   A+  + + LEE DD+FLP +A+    +VH+WVA LA+ DV
Subjt:  QLVEVRINFAELVLDLFGQLNVALLDSGAIFWKNNLLEEWDDVFLPENALVLLPQVHKWVACLAMVDV

TrEMBL top hits

e value

%identity

Alignment

A0A199UX84 Putative tRNA (Guanine(26)-N(2))-dimethyltransferase 2 (Fragment)

1.1e-05

48.53

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Query:  QLVEVRINFAELVLDLFGQLNVALLDSGAIFWKNNLLEEWDDVFLPENALVLLPQVHKWVACLAMVDV
        QLVEV +N +EL+  L  +L VALL   A+  + + LEE DD+FLP +A+    +VH+WVA LA+ DV
Subjt:  QLVEVRINFAELVLDLFGQLNVALLDSGAIFWKNNLLEEWDDVFLPENALVLLPQVHKWVACLAMVDV

A0A1J3GFV7 Uncharacterized protein (Fragment)

1.7e-06

42.7

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Query:  HGIGQLVEVRINFAELVLDLFGQLNVALLDSGAIFWKNNLLEEWDDVFLPENALVLLPQVHKWVACLAMVDVRQPCLHSQPQMITYNLH
        H + QL EV +  A+    L G+L VA      ++ +  LLEE DD+ LPE+ALVLL QV + V  L + DV Q  LH+Q Q++   LH
Subjt:  HGIGQLVEVRINFAELVLDLFGQLNVALLDSGAIFWKNNLLEEWDDVFLPENALVLLPQVHKWVACLAMVDVRQPCLHSQPQMITYNLH

A0A5A7PGM7 Aluminium induced protein with YGL and LRDR motifs

2.6e-07

58.18

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Query:  VEIIPSFNPSHHGIGQLVEVRINFAELVLDLFGQLNVALLDSGAIFWKNNLLEEW
        VE++PS NP HHG+ QL EVRIN  + VLDL GQLNVA+LD  A F K++    W
Subjt:  VEIIPSFNPSHHGIGQLVEVRINFAELVLDLFGQLNVALLDSGAIFWKNNLLEEW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCAATTTAAAGGATTTGTGACTAAACATGCTTGCTTTACATCTCCAAGCTTTACCGTAGGTGCTAGATCTAAGTCCTCGAATTACGTGATTAGTGGACTCTTC
GTCTCTGATTGGACTAACCTTTTTTCAATTCAACCACAACGCTATCGTGAACAAGAAATAGGGTACAAACTAGAACCTGAATCACCATATCTTATTGTTTCTACA
GCTTATATAGAACACTCCAGTTGGGTTGAGATCATCCCAAGCTTCAATCCAAGTCACCATGGCATCGGCCAGCTTGTCGAAGTAAGGATCAACTTTGCTGAGCTT
GTCCTTGACTTGTTTGGCCAGCTCAATGTAGCACTTTTGGACAGTGGTGCAATCTTTTGGAAGAATAACTTGTTGGAAGAATGGGATGATGTCTTCCTGCCAGAA
AATGCCCTTGTACTCCTTCCTCAGGTTCACAAATGGGTTGCTTGCCTTGCTATGGTAGATGTAAGGCAGCCCTGTCTTCACTCCCAACCCCAGATGATCACATAT
AACCTACACGTATGCATTCGGTCGATTAATCGTTCGGTCAATTTATCGTTCAGATGCATCACAGTTCTCATAGCAGAATGCCATGTGCAATCTAATCAATCTATA
ATTCAGCAGCATTGTAATTGTTCTAACAGAATGCTTTCCAAGATGTGCGGATTGAAAATGAATTCAGATTAA

mRNA sequence

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Protein sequence

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MQFKGFVTKHACFTSPSFTVGARSKSSNYVISGLFVSDWTNLFSIQPQRYREQEIGYKLEPESPYLIVSTAYIEHSSWVEIIPSFNPSHHGIGQLVEVRINFAEL
VLDLFGQLNVALLDSGAIFWKNNLLEEWDDVFLPENALVLLPQVHKWVACLAMVDVRQPCLHSQPQMITYNLHVCIRSINRSVNLSFRCITVLIAECHVQSNQSI
IQQHCNCSNRMLSKMCGLKMNSD

CmoCh01G004520 (gene) of Cucurbita moschata (Rifu) v1 genome