; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G004870 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G004870
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTranscription factor UPBEAT1-like
Genome locationCmo_Chr01:2335149..2335481
RNA-Seq ExpressionCmoCh01G004870
SyntenyCmoCh01G004870
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056655.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]2.4e-2968.18Show/hide
Query:  MSSIAKKHRMSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYG
        MS I KKHR+ WKQSTRR VL SR     +R  R H+NGG AC+SD+SA+LE+LQSLIP++++ EG  RR+E+LF++TADYIVLLK+QVFVLQRLIEFYG
Subjt:  MSSIAKKHRMSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYG

Query:  SDERENAVSA
        SD+RENAVS+
Subjt:  SDERENAVSA

KAG6607102.1 hypothetical protein SDJN03_00444, partial [Cucurbita argyrosperma subsp. sororia]3.3e-47100Show/hide
Query:  MSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYGSDERENAVS
        MSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYGSDERENAVS
Subjt:  MSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYGSDERENAVS

Query:  A
        A
Subjt:  A

KAG7036793.1 hypothetical protein SDJN02_00413, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-4294.06Show/hide
Query:  MSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYGSDERENAVS
        MSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYI      VFVLQRLIEFYGSDERENAVS
Subjt:  MSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYGSDERENAVS

Query:  A
        A
Subjt:  A

TYK04615.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]6.3e-3069.09Show/hide
Query:  MSSIAKKHRMSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYG
        MSSI KKHR+ WKQSTRR VL SR     +R  R H+NGG AC+SD+SA+LE+LQSLIP++++ EG  RR+E+LF++TADYIVLLK+QVFVLQRLIEFYG
Subjt:  MSSIAKKHRMSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYG

Query:  SDERENAVSA
        SD+RENAVS+
Subjt:  SDERENAVSA

XP_041003862.1 uncharacterized protein LOC121249205 [Juglans microcarpa x Juglans regia]6.3e-1449.55Show/hide
Query:  MSSIAKKHRMS--WKQSTRRAVLRSRYGSRILRARR-IHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIE
        MSS ++KH+ S  + + TRR   R R  +R  R RR    NGG+ C S++SA+LEAL++LIP  +NG     + ++LFQETA+YI+LL+ QV +LQRL+E
Subjt:  MSSIAKKHRMS--WKQSTRRAVLRSRYGSRILRARR-IHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIE

Query:  FYGSDERENAV
        FYGS  RE  V
Subjt:  FYGSDERENAV

TrEMBL top hitse value%identityAlignment
A0A2P5AW87 Transcription factor UPBEAT-like protein5.2e-1449.54Show/hide
Query:  MSSIAKKHRMSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYG
        MSS  K  + + +++ RR     +  SR   ARR   NGG  CSS VS +LEAL+ LIP     EG   ++++LFQ+TADYIVLL+ QV +LQ+LIEFYG
Subjt:  MSSIAKKHRMSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYG

Query:  SDERENAVS
        S + E+AVS
Subjt:  SDERENAVS

A0A5A7UT08 Transcription factor UPBEAT1-like1.2e-2968.18Show/hide
Query:  MSSIAKKHRMSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYG
        MS I KKHR+ WKQSTRR VL SR     +R  R H+NGG AC+SD+SA+LE+LQSLIP++++ EG  RR+E+LF++TADYIVLLK+QVFVLQRLIEFYG
Subjt:  MSSIAKKHRMSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYG

Query:  SDERENAVSA
        SD+RENAVS+
Subjt:  SDERENAVSA

A0A5D3BZU8 Transcription factor UPBEAT1-like3.0e-3069.09Show/hide
Query:  MSSIAKKHRMSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYG
        MSSI KKHR+ WKQSTRR VL SR     +R  R H+NGG AC+SD+SA+LE+LQSLIP++++ EG  RR+E+LF++TADYIVLLK+QVFVLQRLIEFYG
Subjt:  MSSIAKKHRMSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYG

Query:  SDERENAVSA
        SD+RENAVS+
Subjt:  SDERENAVSA

A0A5N6QW57 Uncharacterized protein6.8e-1448.21Show/hide
Query:  MSSIAKKH----RMSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLI
        MSS A+K     R + ++ TRR   R R  +R  RARR   NGG+ C+  VS +LEAL++LIP  N   G   + ++LF+ETA+YIVLL+ QV +LQRL+
Subjt:  MSSIAKKH----RMSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLI

Query:  EFYGSDERENAV
        EFYGS    N V
Subjt:  EFYGSDERENAV

A0A6J5UGL2 Uncharacterized protein2.0e-1350Show/hide
Query:  KHRMSWKQSTRRAVLRSRYGSRILRA-RRIHKNGG---KACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYGSD
        K  ++ ++ TRR   R R GSR   A RR   NGG   K  S  VSA+LE L+SLI   + G+    +++ELFQETADYIVLL+ QV +LQRL+E YGS 
Subjt:  KHRMSWKQSTRRAVLRSRYGSRILRA-RRIHKNGG---KACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYGSD

Query:  ERENAVSA
        E+EN  +A
Subjt:  ERENAVSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29370.1 unknown protein2.5e-0840.82Show/hide
Query:  KQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFY--GSDERENAV
        K  T R   R+   SR         NG       V  +L AL+SL+P   N  G    +EELFQETA+YIV L+ QV VL++LIE Y   SD++++ V
Subjt:  KQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFY--GSDERENAV

AT5G39240.1 unknown protein5.5e-0838.54Show/hide
Query:  RSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRR------------SEELFQETADYIVLLKNQVFVLQRLIEFYGSDERE
        RSR G R  +     +  G       S +L+AL+SL+P  +      R+            +E+LFQETADYIV L+ QV VLQ+LIE YGS +++
Subjt:  RSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRR------------SEELFQETADYIVLLKNQVFVLQRLIEFYGSDERE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCGATCGCAAAGAAACATAGAATGTCATGGAAGCAATCAACGAGAAGAGCGGTTTTGCGATCGAGGTACGGTTCTAGGATCCTCAGAGCTCGTAGAATCCACAA
AAATGGCGGAAAAGCGTGCTCATCAGACGTATCGGCGAGGCTTGAGGCGCTCCAGAGTCTCATTCCGACTCAGAACAACGGCGAAGGACATCACCGGAGATCGGAGGAGT
TGTTTCAAGAGACGGCGGATTACATCGTGCTTTTGAAGAATCAGGTGTTCGTTTTGCAGAGGCTGATCGAGTTTTACGGATCCGATGAGAGAGAAAATGCCGTATCAGCG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCGATCGCAAAGAAACATAGAATGTCATGGAAGCAATCAACGAGAAGAGCGGTTTTGCGATCGAGGTACGGTTCTAGGATCCTCAGAGCTCGTAGAATCCACAA
AAATGGCGGAAAAGCGTGCTCATCAGACGTATCGGCGAGGCTTGAGGCGCTCCAGAGTCTCATTCCGACTCAGAACAACGGCGAAGGACATCACCGGAGATCGGAGGAGT
TGTTTCAAGAGACGGCGGATTACATCGTGCTTTTGAAGAATCAGGTGTTCGTTTTGCAGAGGCTGATCGAGTTTTACGGATCCGATGAGAGAGAAAATGCCGTATCAGCG
TAG
Protein sequenceShow/hide protein sequence
MSSIAKKHRMSWKQSTRRAVLRSRYGSRILRARRIHKNGGKACSSDVSARLEALQSLIPTQNNGEGHHRRSEELFQETADYIVLLKNQVFVLQRLIEFYGSDERENAVSA