CuGenDBv2

Gene ID	CmoCh01G005410
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	ABC transporter G family member 28
Genome location	Cmo_Chr01:2667842..2668324
RNA-Seq Expression	CmoCh01G005410
Synteny	CmoCh01G005410
Gene Ontology terms	GO:0055085 - transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6607153.1 ABC transporter G family member 28, partial [Cucurbita argyrosperma subsp. sororia]

3.9e-55

100

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Query:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
        MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
Subjt:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG

Query:  AFNFTNNSAFISNCAKKSK
        AFNFTNNSAFISNCAKKSK
Subjt:  AFNFTNNSAFISNCAKKSK

KAG7036841.1 ABC transporter G family member 28, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.7e-55

99.16

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Query:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
        MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSN+LAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
Subjt:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG

Query:  AFNFTNNSAFISNCAKKSK
        AFNFTNNSAFISNCAKKSK
Subjt:  AFNFTNNSAFISNCAKKSK

XP_022948848.1 ABC transporter G family member 28 [Cucurbita moschata]

3.9e-55

100

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Query:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
        MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
Subjt:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG

Query:  AFNFTNNSAFISNCAKKSK
        AFNFTNNSAFISNCAKKSK
Subjt:  AFNFTNNSAFISNCAKKSK

XP_022998839.1 ABC transporter G family member 28 [Cucurbita maxima]

2.2e-50

93.28

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Query:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
        MRKEMKFEIIALFSISFLLLLLLRSV+AQE SAA DQEA SE+DYEEGGDG ES FEKATSNILA+VVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
Subjt:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG

Query:  AFNFTNNSAFISNCAKKSK
        AFNFTNNSAFISNCAKKSK
Subjt:  AFNFTNNSAFISNCAKKSK

XP_023523960.1 ABC transporter G family member 28-like isoform X1 [Cucurbita pepo subsp. pepo]

3.9e-55

100

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Query:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
        MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
Subjt:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG

Query:  AFNFTNNSAFISNCAKKSK
        AFNFTNNSAFISNCAKKSK
Subjt:  AFNFTNNSAFISNCAKKSK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVG3 ABC transporter domain-containing protein

8.3e-19

53.38

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Query:  MRKEMKFEIIALF----SISFLLLLLLRSVQAQEVSAATDQEAISESDY---EEGGDGEESA------FEKATSNILAEVVNDRIKNFTSVFKDDIQENF
        M KE  F    LF    SIS  LLLLL SV         + +  S  DY   +EGG G           + AT +ILA++VNDRIKNFT+VFKDDIQ++F
Subjt:  MRKEMKFEIIALF----SISFLLLLLLRSVQAQEVSAATDQEAISESDY---EEGGDGEESA------FEKATSNILAEVVNDRIKNFTSVFKDDIQENF

Query:  GFCIADADADWDGAFNFT-NNSAFISNCAKKSK
        GFCI+DA+ADWDGAFNFT ++SAFIS CAKK+K
Subjt:  GFCIADADADWDGAFNFT-NNSAFISNCAKKSK

A0A6J1DHF9 ABC transporter G family member 28 isoform X2

3.4e-20

56.14

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Query:  IALFSISFLLLLL---LRSVQAQEVSAATDQEAISESDYEEGGD-GEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDGAFNFT
        IA+    FL+L+      SV+AQ+ S           DY E  D G++S    AT  ILAE+VNDRIKNFT++FKDDI +NFGFCIADA+ DWDGAFNFT
Subjt:  IALFSISFLLLLL---LRSVQAQEVSAATDQEAISESDYEEGGD-GEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDGAFNFT

Query:  NNSAFISNCAKKSK
         NS FIS CA+KSK
Subjt:  NNSAFISNCAKKSK

A0A6J1DJ25 ABC transporter G family member 28 isoform X1

3.4e-20

56.14

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Query:  IALFSISFLLLLL---LRSVQAQEVSAATDQEAISESDYEEGGD-GEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDGAFNFT
        IA+    FL+L+      SV+AQ+ S           DY E  D G++S    AT  ILAE+VNDRIKNFT++FKDDI +NFGFCIADA+ DWDGAFNFT
Subjt:  IALFSISFLLLLL---LRSVQAQEVSAATDQEAISESDYEEGGD-GEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDGAFNFT

Query:  NNSAFISNCAKKSK
         NS FIS CA+KSK
Subjt:  NNSAFISNCAKKSK

A0A6J1GAG0 ABC transporter G family member 28

1.9e-55

100

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Query:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
        MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
Subjt:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG

Query:  AFNFTNNSAFISNCAKKSK
        AFNFTNNSAFISNCAKKSK
Subjt:  AFNFTNNSAFISNCAKKSK

A0A6J1KFF4 ABC transporter G family member 28

1.1e-50

93.28

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Query:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
        MRKEMKFEIIALFSISFLLLLLLRSV+AQE SAA DQEA SE+DYEEGGDG ES FEKATSNILA+VVNDRIKNFTSVFKDDIQENFGFCIADADADWDG
Subjt:  MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDG

Query:  AFNFTNNSAFISNCAKKSK
        AFNFTNNSAFISNCAKKSK
Subjt:  AFNFTNNSAFISNCAKKSK

SwissProt top hits

e value

%identity

Alignment

Q9MAG3 ABC transporter G family member 24

4.5e-06

35.62

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Query:  GEESAFEK-ATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDGAFNFTNNSAFISNCAKKSKGTI
        G+ S F   A   ++ ++V   + N T+    ++     FC+ D DADW+ AFNF++N  F+S+C KK++G+I
Subjt:  GEESAFEK-ATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDGAFNFTNNSAFISNCAKKSKGTI

Q9SJK6 Putative white-brown complex homolog protein 30

7.0e-07

34.21

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Query:  EGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDGAFNFTNNSAFISNCAKKSKGTI
        +G D  ++   KA  ++   ++  R++N  +V K D+  + G+CI +   DW+ AFNF  N  F+SNC KK+ G +
Subjt:  EGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDGAFNFTNNSAFISNCAKKSKGTI

Arabidopsis top hits

e value

%identity

Alignment

AT1G53390.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

3.2e-07

35.62

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Query:  GEESAFEK-ATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDGAFNFTNNSAFISNCAKKSKGTI
        G+ S F   A   ++ ++V   + N T+    ++     FC+ D DADW+ AFNF++N  F+S+C KK++G+I
Subjt:  GEESAFEK-ATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDGAFNFTNNSAFISNCAKKSKGTI

AT2G37010.1 non-intrinsic ABC protein 12

5.0e-08

34.21

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Query:  EGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDGAFNFTNNSAFISNCAKKSKGTI
        +G D  ++   KA  ++   ++  R++N  +V K D+  + G+CI +   DW+ AFNF  N  F+SNC KK+ G +
Subjt:  EGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDGAFNFTNNSAFISNCAKKSKGTI

Sequences

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CDS sequence

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ATGAGGAAGGAGATGAAATTTGAGATTATCGCACTCTTCTCCATCTCCTTTTTGTTATTACTTTTGTTGCGATCCGTTCAGGCTCAGGAGGTTTCGGCTGCTACCGATCA
GGAAGCTATCTCTGAAAGTGACTATGAAGAAGGAGGAGACGGAGAAGAAAGCGCTTTTGAGAAGGCAACTAGTAATATATTGGCGGAGGTTGTTAATGATCGGATTAAGA
ATTTCACCTCTGTTTTCAAGGATGATATTCAGGAGAATTTCGGTTTCTGCATCGCCGATGCGGATGCCGATTGGGATGGAGCCTTCAATTTCACTAATAACTCCGCCTTC
ATCTCTAATTGTGCTAAGAAAAGCAAAGGTACAATTAAACCTTACACTCATATTCCACTCTGA

mRNA sequence

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Protein sequence

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MRKEMKFEIIALFSISFLLLLLLRSVQAQEVSAATDQEAISESDYEEGGDGEESAFEKATSNILAEVVNDRIKNFTSVFKDDIQENFGFCIADADADWDGAFNFTNNSAF
ISNCAKKSKGTIKPYTHIPL

CmoCh01G005410 (gene) of Cucurbita moschata (Rifu) v1 genome