CuGenDBv2

Gene ID	CmoCh01G005530
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	shugoshin-1 isoform X1
Genome location	Cmo_Chr01:2752180..2755044
RNA-Seq Expression	CmoCh01G005530
Synteny	CmoCh01G005530
Gene Ontology terms	GO:0034090 - maintenance of meiotic sister chromatid cohesion (biological process) GO:0000775 - chromosome, centromeric region (cellular component)
InterPro domains	IPR044693 - Shugoshin, plant

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6607167.1 Shugoshin-1, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-149

99.29

Show/hide

Query:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
        MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
Subjt:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI

Query:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR
        NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGN+EWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYA KRDDENKRHCVR
Subjt:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR

Query:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
        AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
Subjt:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD

XP_022949057.1 shugoshin-1 isoform X1 [Cucurbita moschata]

2.4e-150

100

Show/hide

Query:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
        MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
Subjt:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI

Query:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR
        NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR
Subjt:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR

Query:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
        AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
Subjt:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD

XP_022949058.1 shugoshin-1 isoform X2 [Cucurbita moschata]

2.2e-148

99.65

Show/hide

Query:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
        MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
Subjt:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI

Query:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR
        NLGRDRIKSLGHELECKEALLKATRLNT GKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR
Subjt:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR

Query:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
        AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
Subjt:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD

XP_022998886.1 shugoshin-1 isoform X1 [Cucurbita maxima]

5.2e-145

97.16

Show/hide

Query:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
        MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLV+ENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
Subjt:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI

Query:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR
        NLGR+RIKSLGHELECKEALLKATRLNTVGKAGMNNGN EWQEEEKPTEQFPLAVK DTKACSGNRKPSGRARNQSMSPSASYSK AMKRDDENKRHCVR
Subjt:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR

Query:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
        AQSGRFRYQMRH E+NSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRH+
Subjt:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD

XP_023525297.1 shugoshin-1 [Cucurbita pepo subsp. pepo]

5.7e-144

96.81

Show/hide

Query:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
        MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDL+EAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
Subjt:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI

Query:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR
        NLGR+RIKSLGHELECKEALLKATRLNTVGKAGMNNGN  WQEEEKPTEQFPLAVK DTKACSGNRKPSGRARNQSMSPSASYSK AMKR DENKRHCVR
Subjt:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR

Query:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
        AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRR +
Subjt:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSM0 Uncharacterized protein

2.0e-81

64.91

Show/hide

Query:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
        MAK  SIGS++RNKLADITNSKTMR+H+EDE SSEA +  + V+DQLV+ENM LMKL+ME+N+II+LSEAEL KLR  IQKLQLQNW LAQSNS FLAEI
Subjt:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI

Query:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLA-VKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCV
        NLGR RIKSL HE+ECKEALL+A RL   GKA MNN N EWQE EK T Q  LA V  DTK+ +GN KP GR R++SMSPS SYS    K+   NKRHCV
Subjt:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLA-VKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCV

Query:  RAQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSS--SALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
        R  S RFR+Q+R  EE  FEI ED+K  A      E++ N+ +SP S   SALQR+ IGRPL RAAEKI+SYKE+R N K+RR +
Subjt:  RAQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSS--SALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD

A0A6J1GAY9 shugoshin-1 isoform X1

1.2e-150

100

Show/hide

Query:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
        MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
Subjt:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI

Query:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR
        NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR
Subjt:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR

Query:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
        AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
Subjt:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD

A0A6J1GB03 shugoshin-1 isoform X2

1.1e-148

99.65

Show/hide

Query:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
        MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
Subjt:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI

Query:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR
        NLGRDRIKSLGHELECKEALLKATRLNT GKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR
Subjt:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR

Query:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
        AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
Subjt:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD

A0A6J1K985 shugoshin-1 isoform X2

2.3e-143

96.81

Show/hide

Query:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
        MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLV+ENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
Subjt:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI

Query:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR
        NLGR+RIKSLGHELECKEALLKATRLNT GKAGMNNGN EWQEEEKPTEQFPLAVK DTKACSGNRKPSGRARNQSMSPSASYSK AMKRDDENKRHCVR
Subjt:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR

Query:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
        AQSGRFRYQMRH E+NSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRH+
Subjt:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD

A0A6J1KBG4 shugoshin-1 isoform X1

2.5e-145

97.16

Show/hide

Query:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
        MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLV+ENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI
Subjt:  MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEI

Query:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR
        NLGR+RIKSLGHELECKEALLKATRLNTVGKAGMNNGN EWQEEEKPTEQFPLAVK DTKACSGNRKPSGRARNQSMSPSASYSK AMKRDDENKRHCVR
Subjt:  NLGRDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVR

Query:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD
        AQSGRFRYQMRH E+NSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRH+
Subjt:  AQSGRFRYQMRHHEENSFEIEEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD

SwissProt top hits

e value

%identity

Alignment

E3VXF2 Shugoshin-1

5.1e-10

30.88

Show/hide

Query:  VDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEALL--KATRLNTVGKAGMNNGNFEW
        +  +++EN  L  L+ E+N++I++S  EL K+R  +Q +Q +N QL Q+NS   AEIN G+DRIK L HEL C  A+L  K + L  + K   N  N   
Subjt:  VDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEALL--KATRLNTVGKAGMNNGNFEW

Query:  QEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVRAQSGRFRYQMRHHEENSFE--IEEDMKFTATGEDEEERKNN
          E+K         K    A    R+       QS  PS + S +   +D  NKR   R +S      M   + N+ +      +++  +  D++ RK  
Subjt:  QEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVRAQSGRFRYQMRHHEENSFE--IEEDMKFTATGEDEEERKNN

Query:  NVNS
           S
Subjt:  NVNS

F4J3S1 SHUGOSHIN 1

6.0e-11

32.18

Show/hide

Query:  IGSRVRNKLADITNSKTMRAHMED---ERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLG
        + S  R KL DITN +  +  M      +      S+++  + L +EN  LMK+VME++ I    +++L KLR   QK+Q QN  LAQ+N+  LAE N  
Subjt:  IGSRVRNKLADITNSKTMRAHMED---ERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLG

Query:  RDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVRAQS
        +D++K L HEL CK  L+ A ++               +E+  P  +    VK    AC G  K      N +    AS S  A       K +  R  S
Subjt:  RDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVRAQS

Query:  GR
        GR
Subjt:  GR

Q0WTB8 SHUGOSHIN 2

3.4e-14

44.33

Show/hide

Query:  EDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEALLKATR
        E ++      S+Q+   +L +ENM LMK +  +N++++LS  E+ KLR  ++ +Q +N QLAQ+NS  LAE+N  RDR+K L HEL CK ALLK  +
Subjt:  EDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEALLKATR

Q4QSC8 Shugoshin-1

4.9e-13

36.87

Show/hide

Query:  LADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHEL
        LADITN+    A            +    V  LV+EN  L+ L+ EK +IIDLS  E+ KLR  +Q  + QN  L Q+NS  LAEIN G+DRIK L HEL
Subjt:  LADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHEL

Query:  ECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACS----GNRKPSGRARNQSMSPSASYSKYAMK---RDDENKRHCVRAQSGR
         C  ALLK        K   N GN     ++K  +   L  K  T A      G+   SG   +   S SA  S    +   +D + KR   R +S R
Subjt:  ECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACS----GNRKPSGRARNQSMSPSASYSKYAMK---RDDENKRHCVRAQSGR

Arabidopsis top hits

e value

%identity

Alignment

AT3G10440.1 Shugoshin C terminus

4.2e-12

32.18

Show/hide

Query:  IGSRVRNKLADITNSKTMRAHMED---ERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLG
        + S  R KL DITN +  +  M      +      S+++  + L +EN  LMK+VME++ I    +++L KLR   QK+Q QN  LAQ+N+  LAE N  
Subjt:  IGSRVRNKLADITNSKTMRAHMED---ERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLG

Query:  RDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVRAQS
        +D++K L HEL CK  L+ A ++               +E+  P  +    VK    AC G  K      N +    AS S  A       K +  R  S
Subjt:  RDRIKSLGHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVRAQS

Query:  GR
        GR
Subjt:  GR

AT5G04320.1 Shugoshin C terminus

2.9e-13

Show/hide

Query:  MALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEALLKATR
        M LMK +  +N++++LS  E+ KLR  ++ +Q +N QLAQ+NS  LAE+N  RDR+K L HEL CK ALLK  +
Subjt:  MALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEALLKATR

AT5G04320.2 Shugoshin C terminus

2.4e-15

44.33

Show/hide

Query:  EDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEALLKATR
        E ++      S+Q+   +L +ENM LMK +  +N++++LS  E+ KLR  ++ +Q +N QLAQ+NS  LAE+N  RDR+K L HEL CK ALLK  +
Subjt:  EDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSLGHELECKEALLKATR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGAAGCGATTGTCGATTGGAAGCAGAGTGCGGAACAAGCTAGCAGATATTACGAATTCCAAGACAATGAGAGCTCATATGGAAGATGAAAGGTCTTCGGAAGCTTG
GCGGTCAAATCAAGACGTTGTCGATCAGCTGGTGGAGGAAAATATGGCTCTGATGAAACTTGTCATGGAGAAGAATGAAATTATTGATCTGAGTGAAGCCGAGCTAAACA
AACTTCGGGAATGCATTCAGAAACTGCAGCTTCAGAATTGGCAGCTTGCTCAATCAAACAGTCATTTTTTAGCAGAAATCAATTTAGGGAGAGATAGAATAAAATCACTG
GGGCATGAGCTTGAATGCAAGGAGGCCTTGCTAAAAGCAACGCGTTTGAATACCGTGGGGAAAGCAGGAATGAATAATGGAAATTTTGAATGGCAGGAAGAAGAGAAGCC
AACAGAGCAATTTCCACTTGCGGTTAAAATTGACACCAAAGCTTGCAGTGGAAACAGAAAGCCCTCCGGACGAGCTAGAAATCAATCTATGAGCCCTTCAGCTTCATACT
CAAAGTATGCGATGAAGAGAGATGATGAAAACAAAAGGCATTGTGTAAGAGCACAATCTGGTAGATTTAGATATCAAATGAGACACCATGAAGAGAACTCGTTTGAAATA
GAAGAAGACATGAAATTTACTGCTACTGGAGAAGATGAAGAAGAAAGGAAGAACAACAATGTCAATTCACCATCATCATCTTCAGCTCTGCAAAGATCTTATATTGGAAG
ACCATTGCACAGAGCAGCTGAAAAGATTCAATCCTACAAAGAAGCTCGTCACAACGCTAAAATCAGACGACATGATTGA

mRNA sequence

Show/hide mRNA sequence

GCTCTCGACGATTGCAGAATCTTCGTGTTCAGCTTTTTTGCTTTGTTCCTTTGAATCTTGAATCTCTGTAATTAGGGCTTTTCTTTCCTCTCTAATTTCCTCTGTTTTCT
CTTCCATAAAAACCGCAAATTCCTCTCATCATAGACACCAGAAATCCCCAATTATTGGCGAAATTCCTTCCTTAGGGCATTGTGTTACGATTCGCTGATTTGAAATGGCG
AAGCGATTGTCGATTGGAAGCAGAGTGCGGAACAAGCTAGCAGATATTACGAATTCCAAGACAATGAGAGCTCATATGGAAGATGAAAGGTCTTCGGAAGCTTGGCGGTC
AAATCAAGACGTTGTCGATCAGCTGGTGGAGGAAAATATGGCTCTGATGAAACTTGTCATGGAGAAGAATGAAATTATTGATCTGAGTGAAGCCGAGCTAAACAAACTTC
GGGAATGCATTCAGAAACTGCAGCTTCAGAATTGGCAGCTTGCTCAATCAAACAGTCATTTTTTAGCAGAAATCAATTTAGGGAGAGATAGAATAAAATCACTGGGGCAT
GAGCTTGAATGCAAGGAGGCCTTGCTAAAAGCAACGCGTTTGAATACCGTGGGGAAAGCAGGAATGAATAATGGAAATTTTGAATGGCAGGAAGAAGAGAAGCCAACAGA
GCAATTTCCACTTGCGGTTAAAATTGACACCAAAGCTTGCAGTGGAAACAGAAAGCCCTCCGGACGAGCTAGAAATCAATCTATGAGCCCTTCAGCTTCATACTCAAAGT
ATGCGATGAAGAGAGATGATGAAAACAAAAGGCATTGTGTAAGAGCACAATCTGGTAGATTTAGATATCAAATGAGACACCATGAAGAGAACTCGTTTGAAATAGAAGAA
GACATGAAATTTACTGCTACTGGAGAAGATGAAGAAGAAAGGAAGAACAACAATGTCAATTCACCATCATCATCTTCAGCTCTGCAAAGATCTTATATTGGAAGACCATT
GCACAGAGCAGCTGAAAAGATTCAATCCTACAAAGAAGCTCGTCACAACGCTAAAATCAGACGACATGATTGACAAGTGAGATCAGTATACTGTTTCAGCTAGCAGTTTA
AATTTTACTTTCTTGTATGTAGCTATGATTATTCCACCTGTGGCTTGTATTGTTCTTGATGTTTATATATTATTTTGTTTCGAGTGTATGTATAGTGTAAATTATGTATC
TGTCAAGAGAAGAGATTCGAACTTCTAACTTATTAAAAAGGAGACG

Protein sequence

Show/hide protein sequence

MAKRLSIGSRVRNKLADITNSKTMRAHMEDERSSEAWRSNQDVVDQLVEENMALMKLVMEKNEIIDLSEAELNKLRECIQKLQLQNWQLAQSNSHFLAEINLGRDRIKSL
GHELECKEALLKATRLNTVGKAGMNNGNFEWQEEEKPTEQFPLAVKIDTKACSGNRKPSGRARNQSMSPSASYSKYAMKRDDENKRHCVRAQSGRFRYQMRHHEENSFEI
EEDMKFTATGEDEEERKNNNVNSPSSSSALQRSYIGRPLHRAAEKIQSYKEARHNAKIRRHD

CmoCh01G005530 (gene) of Cucurbita moschata (Rifu) v1 genome