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CmoCh01G005660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G005660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionvon Willebrand factor, type A
Genome locationCmo_Chr01:2848252..2849929
RNA-Seq ExpressionCmoCh01G005660
SyntenyCmoCh01G005660
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO71229.1 von Willebrand factor, type A [Corchorus capsularis]1.5e-0570.21Show/hide
Query:  YSESESIERNIRCLTERFWRGKENGLSDLCRLAFSFLTSFIPRSREA
        YSESESIER    LTERF RG + GLSDLC L FS L SFIP  REA
Subjt:  YSESESIERNIRCLTERFWRGKENGLSDLCRLAFSFLTSFIPRSREA
OMP09731.1 von Willebrand factor, type A [Corchorus olitorius]8.4e-0466.67Show/hide
Query:  YSES-ESIERNIRCLTERFWRGKENGLSDLCRLAFSFLTSFIPRSREA
        YSES ESIER    LTERF RG + GLSDLC L FS L SF+P  REA
Subjt:  YSES-ESIERNIRCLTERFWRGKENGLSDLCRLAFSFLTSFIPRSREA
TrEMBL top hitse value%identityAlignment
A0A1R3HLK1 von Willebrand factor, type A7.4e-0670.21Show/hide
Query:  YSESESIERNIRCLTERFWRGKENGLSDLCRLAFSFLTSFIPRSREA
        YSESESIER    LTERF RG + GLSDLC L FS L SFIP  REA
Subjt:  YSESESIERNIRCLTERFWRGKENGLSDLCRLAFSFLTSFIPRSREA
A0A1R3KRM7 von Willebrand factor, type A4.1e-0466.67Show/hide
Query:  YSES-ESIERNIRCLTERFWRGKENGLSDLCRLAFSFLTSFIPRSREA
        YSES ESIER    LTERF RG + GLSDLC L FS L SF+P  REA
Subjt:  YSES-ESIERNIRCLTERFWRGKENGLSDLCRLAFSFLTSFIPRSREA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATACCCTTAACCAAATCCAAACTCTATTATGGCCATGTCAATGCTGTCTGTTCATTTGGGTTAAAGCTGTTATGAGTTTTGTACCAAAGTTTCAAGTATGTCGTAT
GATGAATCAGAGGCTCACTTTGTTACTGTTGAAGTTGTCTTTGATGTTTCGACAGACAGCTCAACCTATTTTCAGAGGCGAAAACGGTCACGCCAATTACACATTAAACT
TTCTTTCTGGTGTAAAATTAATTTCTATAAATAAACTAAATCTCAATCAAAGATATATACACCTAATTGCTCTCATCGTAGAGGAAAAAAAATTGTATTACATGACGACT
ACCCAATTCATGACCATCTCTCTCTGTACAGTTTCACCCGCACTGGAACTACAGGCACACAAGTCGTCCGACCATCCTGCCATCCTCTATCACATTAGGCCTTTGGCGTC
ACCAATAATCAGAATTGAAGAGAGTTGGGTGCTTTGGTCCTTGACGATTGCTCGTTTATCAACTTTCTTACCCATAAAATATGGGGGAACATACTTGAAGTTTGAAGAAG
AGATGAACCAAAATGAATATTTACGAGCTTGCCTGTCCCCAGAAAGAAATCAAATAAGAGCAGCAATAATTCTTGGTCATCTAAGGTACAAAGCCTACTCTGAATCGGAG
TCTATAGAAAGGAACATCCGCTGTCTGACAGAACGCTTCTGGCGAGGGAAGGAGAATGGGCTATCTGATCTTTGCCGGCTTGCTTTCTCATTTCTAACGTCGTTCATTCC
AAGAAGCAGAGAAGCTGATGCAACAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGCATACCCTTAACCAAATCCAAACTCTATTATGGCCATGTCAATGCTGTCTGTTCATTTGGGTTAAAGCTGTTATGAGTTTTGTACCAAAGTTTCAAGTATGTCGTAT
GATGAATCAGAGGCTCACTTTGTTACTGTTGAAGTTGTCTTTGATGTTTCGACAGACAGCTCAACCTATTTTCAGAGGCGAAAACGGTCACGCCAATTACACATTAAACT
TTCTTTCTGGTGTAAAATTAATTTCTATAAATAAACTAAATCTCAATCAAAGATATATACACCTAATTGCTCTCATCGTAGAGGAAAAAAAATTGTATTACATGACGACT
ACCCAATTCATGACCATCTCTCTCTGTACAGTTTCACCCGCACTGGAACTACAGGCACACAAGTCGTCCGACCATCCTGCCATCCTCTATCACATTAGGCCTTTGGCGTC
ACCAATAATCAGAATTGAAGAGAGTTGGGTGCTTTGGTCCTTGACGATTGCTCGTTTATCAACTTTCTTACCCATAAAATATGGGGGAACATACTTGAAGTTTGAAGAAG
AGATGAACCAAAATGAATATTTACGAGCTTGCCTGTCCCCAGAAAGAAATCAAATAAGAGCAGCAATAATTCTTGGTCATCTAAGGTACAAAGCCTACTCTGAATCGGAG
TCTATAGAAAGGAACATCCGCTGTCTGACAGAACGCTTCTGGCGAGGGAAGGAGAATGGGCTATCTGATCTTTGCCGGCTTGCTTTCTCATTTCTAACGTCGTTCATTCC
AAGAAGCAGAGAAGCTGATGCAACAATATAG
Protein sequenceShow/hide protein sequence
MHTLNQIQTLLWPCQCCLFIWVKAVMSFVPKFQVCRMMNQRLTLLLLKLSLMFRQTAQPIFRGENGHANYTLNFLSGVKLISINKLNLNQRYIHLIALIVEEKKLYYMTT
TQFMTISLCTVSPALELQAHKSSDHPAILYHIRPLASPIIRIEESWVLWSLTIARLSTFLPIKYGGTYLKFEEEMNQNEYLRACLSPERNQIRAAIILGHLRYKAYSESE
SIERNIRCLTERFWRGKENGLSDLCRLAFSFLTSFIPRSREADATI