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CmoCh01G005880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G005880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGlycine-rich RNA-binding protein 2
Genome locationCmo_Chr01:2979309..2981984
RNA-Seq ExpressionCmoCh01G005880
SyntenyCmoCh01G005880
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607204.1 hypothetical protein SDJN03_00546, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1887.69Show/hide
Query:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
        MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKE    R +D +
Subjt:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
XP_022156165.1 uncharacterized protein LOC111023120 [Momordica charantia]2.1e-1583.08Show/hide
Query:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
        MS  LTPRSSAYLSALS KIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKE    R +D +
Subjt:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
XP_022948700.1 uncharacterized protein LOC111452293 isoform X1 [Cucurbita moschata]2.6e-1887.69Show/hide
Query:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
        MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKE    R +D +
Subjt:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
XP_022998064.1 uncharacterized protein LOC111492822 isoform X1 [Cucurbita maxima]7.2e-1684.62Show/hide
Query:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
        M WALTPRSSAYLSALSLKIEKKLQRALA SSQRRDVLQELFADVALEVDDRAKE    R +D +
Subjt:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
XP_023523135.1 uncharacterized protein LOC111787353 [Cucurbita pepo subsp. pepo]2.6e-1887.69Show/hide
Query:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
        MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKE    R +D +
Subjt:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
TrEMBL top hitse value%identityAlignment
A0A6J1DPI7 uncharacterized protein LOC1110231201.0e-1583.08Show/hide
Query:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
        MS  LTPRSSAYLSALS KIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKE    R +D +
Subjt:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
A0A6J1GAM3 uncharacterized protein LOC111452293 isoform X11.3e-1887.69Show/hide
Query:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
        MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKE    R +D +
Subjt:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
A0A6J1HIB4 uncharacterized protein LOC111464663 isoform X11.0e-1592.73Show/hide
Query:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKE
        MS  LTPRSSAYLSALSL+IEKKLQRALASSSQRRDVLQELFAD+ALEVDDRAKE
Subjt:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKE
A0A6J1HJJ6 uncharacterized protein LOC111464663 isoform X31.0e-1592.73Show/hide
Query:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKE
        MS  LTPRSSAYLSALSL+IEKKLQRALASSSQRRDVLQELFAD+ALEVDDRAKE
Subjt:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKE
A0A6J1KDB4 uncharacterized protein LOC111492822 isoform X13.5e-1684.62Show/hide
Query:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
        M WALTPRSSAYLSALSLKIEKKLQRALA SSQRRDVLQELFADVALEVDDRAKE    R +D +
Subjt:  MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G59960.1 unknown protein3.7e-1056.9Show/hide
Query:  RSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL
        R SAYL AL+ +I+KKL RA+ S +Q R++LQ+LFAD+ALEVDDRAK+    + +DL+
Subjt:  RSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTGGGCGTTGACGCCTCGGAGCTCTGCTTATCTTAGCGCTTTGTCTCTGAAGATTGAGAAGAAGCTTCAGCGGGCATTAGCTTCTTCATCCCAGAGGCGAGATGT
GCTGCAAGAATTGTTTGCTGATGTAGCATTAGAAGTAGATGACCGAGCCAAAGAGAATCACTCTATTAGAGCTGATGATTTATTAAAGACTTCTACCTAG
mRNA sequenceShow/hide mRNA sequence
CACCAACCCAAAGTCGCCACTCTTTGTCGGTCATCACGTCCAAGCCCCACGCTGTTGCCTCCATCGGGCGCCAAATCAACCTCGCCTCTTCTCTCTTCTCTCTTCCTTCA
AACCCTTTCTCTTCAGCTACACGCCGAACCTACCCCTCTCGATCTTCTCATGCATTCTCTTCCATCAATTTCTTCTTCCACAACCTCAGTTTTCTCATTCATGTTTCTTT
CACGCTGGTCGGAGTGATCGAGATTAGGGTTTCGCTTCTGCAATCTCGCTTCTCTCTTCTCGTATGTTTTTGTTTGCTGTGTGATCAGAATGTCTTGGGCGTTGACGCCT
CGGAGCTCTGCTTATCTTAGCGCTTTGTCTCTGAAGATTGAGAAGAAGCTTCAGCGGGCATTAGCTTCTTCATCCCAGAGGCGAGATGTGCTGCAAGAATTGTTTGCTGA
TGTAGCATTAGAAGTAGATGACCGAGCCAAAGAGAATCACTCTATTAGAGCTGATGATTTATTAAAGACTTCTACCTAG
Protein sequenceShow/hide protein sequence
MSWALTPRSSAYLSALSLKIEKKLQRALASSSQRRDVLQELFADVALEVDDRAKENHSIRADDLLKTST