; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G005910 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G005910
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHistone H2A
Genome locationCmo_Chr01:2998168..2999657
RNA-Seq ExpressionCmoCh01G005910
SyntenyCmoCh01G005910
Gene Ontology termsGO:0031507 - heterochromatin assembly (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR002119 - Histone H2A
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold
IPR032454 - Histone H2A, C-terminal domain
IPR032458 - Histone H2A conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149043.1 histone H2A [Cucumis sativus]5.1e-7094.12Show/hide
Query:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
        M+T  KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY+AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
Subjt:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE

Query:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
        ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKA +KEPKSPSK PK  KSPKKA
Subjt:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA

XP_022949405.1 histone H2A-like [Cucurbita moschata]2.6e-74100Show/hide
Query:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
        MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
Subjt:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE

Query:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
        ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
Subjt:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA

XP_022964993.1 histone H2A [Cucurbita moschata]3.9e-7094.77Show/hide
Query:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
        MD+S+KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY+AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
Subjt:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE

Query:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
        ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAA+KEPKSPSK  K  KSPKKA
Subjt:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA

XP_022997818.1 histone H2A-like [Cucurbita maxima]2.9e-7398.69Show/hide
Query:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
        MD S KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
Subjt:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE

Query:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
        ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
Subjt:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA

XP_038895656.1 histone H2A [Benincasa hispida]2.5e-6994.12Show/hide
Query:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
        M+T  KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLK+GRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
Subjt:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE

Query:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
        ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAA+KEPKSPSK  K  KSPKKA
Subjt:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA

TrEMBL top hitse value%identityAlignment
A0A5D3BQ44 Histone H2A2.4e-7094.12Show/hide
Query:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
        M+T  KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY+AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
Subjt:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE

Query:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
        ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKA +KEPKSPSK PK  KSPKKA
Subjt:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA

A0A6J1GCN5 Histone H2A1.3e-74100Show/hide
Query:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
        MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
Subjt:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE

Query:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
        ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
Subjt:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA

A0A6J1HMJ0 Histone H2A1.9e-7094.77Show/hide
Query:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
        MD+S+KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY+AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
Subjt:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE

Query:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
        ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAA+KEPKSPSK  K  KSPKKA
Subjt:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA

A0A6J1I2Z0 Histone H2A1.9e-7094.77Show/hide
Query:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
        MD+S+KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY+AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
Subjt:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE

Query:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
        ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAA+KEPKSPSK  K  KSPKKA
Subjt:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA

A0A6J1KF15 Histone H2A1.4e-7398.69Show/hide
Query:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
        MD S KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
Subjt:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE

Query:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
        ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
Subjt:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA

SwissProt top hitse value%identityAlignment
P25470 Histone H2A.13.1e-6282.35Show/hide
Query:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
        MD S+K KKGAGGRKGGGP+KK V+RSV+AGLQFPVGR+GR+LK GRYA+RVGTGAPVY+AAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLA+RNDE
Subjt:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE

Query:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
        ELGKLLAGVTIA+GGVLPNINPVLLPK+ E AA+  PKSPS   K  KSPKKA
Subjt:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA

Q1S053 Probable histone H2A.32.6e-6182.05Show/hide
Query:  MDTSSK-LKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRND
        MD S+K  KKGAGGRKGGGP+KK V+RS++AGLQFPVGRIGRYLK GRYA+RVGTGAPVY+AAVLEYLAAEVLELAGNAARDNKKNRIIPRH+LLA+RND
Subjt:  MDTSSK-LKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSEKA--ASKEPKSPSKTPKGAKSPKKA
        EELGKLLAGVTIAHGGVLPNINP+LLPKK+E+A    KEP    KT K  KSPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSEKA--ASKEPKSPSKTPKGAKSPKKA

Q2HU65 Probable histone H2A.28.7e-6585.16Show/hide
Query:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
        MD S+K KKGAGGRKGGGP+KK V+RS++AGLQFPVGRIGRYLK GRYA+RVGTGAPVY+AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDE
Subjt:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE

Query:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKA--ASKEPKSPSKTPKGAKSPKKA
        ELGKLLAGVTIAHGGVLPNINPVLLPKK+E++   SKEPKSP   PK  KSPKKA
Subjt:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKA--ASKEPKSPSKTPKGAKSPKKA

Q9LZ46 Probable histone H2A.41.4e-6283.97Show/hide
Query:  MDTSSKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRND
        MD+ +K+KKGA GR+ GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRY++RVGTGAPVY+AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RND
Subjt:  MDTSSKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAAS--KEPKSPSKTPKGAKSPKKA
        EELG LL GVTIAHGGVLPNINP+LLPKKSEKAAS  K PKSPS   K  KSPKK+
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAAS--KEPKSPSKTPKGAKSPKKA

Q9M531 Histone H2A1.3e-6586.27Show/hide
Query:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE
        MDT +KLKKGAG RKGGGPKKKPVSRSVKAGLQFPVGRIGR+LK GRYA+RVG+GAPVY+AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDE
Subjt:  MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE

Query:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
        ELGKLLAGVTIAHGGVLPNINPVLLPKK+EKAA+   K P    K  KSPKKA
Subjt:  ELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA

Arabidopsis top hitse value%identityAlignment
AT3G20670.1 histone H2A 132.3e-4475Show/hide
Query:  GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGV
        G G   G G  KK  SRS KAGLQFPVGRI R+LKNG+YA RVG GAPVY+AAVLEYLAAEVLELAGNAARDNKK RI+PRH+ LA+RNDEEL KLL  V
Subjt:  GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGV

Query:  TIAHGGVLPNINPVLLPKKS
        TIA+GGV+PNI+ +LLPKK+
Subjt:  TIAHGGVLPNINPVLLPKKS

AT5G02560.1 histone H2A 129.8e-6483.97Show/hide
Query:  MDTSSKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRND
        MD+ +K+KKGA GR+ GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRY++RVGTGAPVY+AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RND
Subjt:  MDTSSKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAAS--KEPKSPSKTPKGAKSPKKA
        EELG LL GVTIAHGGVLPNINP+LLPKKSEKAAS  K PKSPS   K  KSPKK+
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAAS--KEPKSPSKTPKGAKSPKKA

AT5G02560.2 histone H2A 121.1e-5972.78Show/hide
Query:  MDTSSKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAE------------------------VLELA
        MD+ +K+KKGA GR+ GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRY++RVGTGAPVY+AAVLEYLAAE                        VLELA
Subjt:  MDTSSKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAE------------------------VLELA

Query:  GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAAS--KEPKSPSKTPKGAKSPKKA
        GNAARDNKKNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPNINP+LLPKKSEKAAS  K PKSPS   K  KSPKK+
Subjt:  GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSEKAAS--KEPKSPSKTPKGAKSPKKA

AT5G27670.1 histone H2A 75.6e-5174.67Show/hide
Query:  SSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELG
        ++K  +GAGGRK GG +KK VS+SVKAGLQFPVGRI RYLK GRYA R G+GAPVY+AAVLEYLAAEVLELAGNAARDNKKNRI PRH+ LAIRNDEELG
Subjt:  SSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELG

Query:  KLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA
        +LL GVTIA GGVLPNINPVLLPKKS  ++S+  K+        KSPKKA
Subjt:  KLLAGVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA

AT5G59870.1 histone H2A 61.2e-5376.67Show/hide
Query:  MDTSSKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRND
        M+++ K+KK  GGRK  G PK K VS+S+KAGLQFPVGRI R+LK GRYA+R+G GAPVYMAAVLEYLAAEVLELAGNAARDNKK+RIIPRH+LLAIRND
Subjt:  MDTSSKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKS--EKAASKEPKSPSKTPKGA
        EELGKLL+GVTIAHGGVLPNIN VLLPKKS  + A  K  KSP K+PK A
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKS--EKAASKEPKSPSKTPKGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACAAGCAGCAAGTTGAAGAAAGGAGCTGGTGGCAGAAAGGGCGGTGGCCCGAAGAAGAAGCCTGTTTCTCGCTCTGTTAAGGCCGGCCTCCAGTTTCCCGTCGG
TAGAATTGGCAGATATTTGAAGAATGGCCGGTATGCTCGACGTGTCGGTACTGGAGCTCCGGTCTACATGGCCGCCGTTCTTGAGTATCTCGCCGCTGAGGTGCTGGAGT
TGGCTGGAAATGCAGCCCGGGACAACAAAAAGAACAGGATAATTCCAAGGCATGTATTGTTGGCCATAAGGAACGATGAGGAACTTGGGAAATTGCTTGCTGGTGTAACG
ATTGCTCATGGAGGTGTTCTTCCAAACATAAACCCTGTTCTGTTGCCAAAGAAAAGCGAGAAAGCAGCTAGTAAAGAACCGAAATCTCCATCAAAGACCCCCAAGGGAGC
AAAATCCCCAAAGAAGGCCTAG
mRNA sequenceShow/hide mRNA sequence
CCACTCTATATAATTCTTCCCGCAAAACCAACTTCTCATTGTTATATCCACTGGCCTAATTTCATTTTCCTGTAATTCCTTCAAGTTCCTCTGATTTCCGGCGATCAGGT
CAGGTTTCGATGGACACAAGCAGCAAGTTGAAGAAAGGAGCTGGTGGCAGAAAGGGCGGTGGCCCGAAGAAGAAGCCTGTTTCTCGCTCTGTTAAGGCCGGCCTCCAGTT
TCCCGTCGGTAGAATTGGCAGATATTTGAAGAATGGCCGGTATGCTCGACGTGTCGGTACTGGAGCTCCGGTCTACATGGCCGCCGTTCTTGAGTATCTCGCCGCTGAGG
TGCTGGAGTTGGCTGGAAATGCAGCCCGGGACAACAAAAAGAACAGGATAATTCCAAGGCATGTATTGTTGGCCATAAGGAACGATGAGGAACTTGGGAAATTGCTTGCT
GGTGTAACGATTGCTCATGGAGGTGTTCTTCCAAACATAAACCCTGTTCTGTTGCCAAAGAAAAGCGAGAAAGCAGCTAGTAAAGAACCGAAATCTCCATCAAAGACCCC
CAAGGGAGCAAAATCCCCAAAGAAGGCCTAGGTTTTTTCTTTCTAATCTGAAAACTTGACTGTTCTTTGCCCATTTGTATGTACTTTGTTGGCCTTTTAGGATCATCTTC
TGTGTTGTTTATCAATGTAAGCTTAAAACTGAAGAATTGGGAGAGACTCTATCACTCCCACCATCGTAATGAATCAAACTCTGTACTGGTTATGATTGTTTAGCCGTCAA
TTCTTCTCTTCCTTTTGTTCATCTTAAATGGATAAGGTTGAAAGAACAGAAATACCTAATGGACTGAGGTCCCAAATTCGAACCTTGATTGCTAGTTATCCATTATTTCT
TTCCAGCTCAAATTTTCATAGAATAGCAAAGAAATTAGTGTGCCAACCTTGAACCAGACAGAATGAGAATATTGGCAATCTTCTCTTCTTGCCTACCAAGAATGAATCAT
CAAGGGAATAGAAAGAGTGTTTGTGGGCACGTCTACAAGTC
Protein sequenceShow/hide protein sequence
MDTSSKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVT
IAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA