; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G005940 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G005940
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionzinc finger protein ZAT12-like isoform X1
Genome locationCmo_Chr01:3007539..3007943
RNA-Seq ExpressionCmoCh01G005940
SyntenyCmoCh01G005940
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607211.1 Zinc finger protein ZAT12, partial [Cucurbita argyrosperma subsp. sororia]1.0e-66100Show/hide
Query:  MEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAVLKKSDGCGK
        MEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAVLKKSDGCGK
Subjt:  MEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAVLKKSDGCGK

Query:  RVFELDLNLPPLENNLNLKLQLSL
        RVFELDLNLPPLENNLNLKLQLSL
Subjt:  RVFELDLNLPPLENNLNLKLQLSL

KAG7036896.1 Zinc finger protein ZAT12, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-7199.26Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT-AAA
        MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT AAA
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT-AAA

Query:  AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  AVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

XP_022949001.1 zinc finger protein ZAT12-like isoform X1 [Cucurbita moschata]1.2e-72100Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA
        MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA

Query:  VLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        VLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  VLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

XP_022997819.1 zinc finger protein ZAT12-like isoform X1 [Cucurbita maxima]6.2e-7298.51Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA
        MVDCLMLLSKMEEPRRKNGFAPTPAADSDK+FVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR+TAAAA
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA

Query:  VLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        VLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  VLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

XP_023524575.1 zinc finger protein ZAT12-like [Cucurbita pepo subsp. pepo]9.9e-7097.74Show/hide
Query:  DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT-AAAAV
        DCLMLLSKMEEPRRKNGF+PTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT AAAAV
Subjt:  DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT-AAAAV

Query:  LKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        LKKSDGCGKR+FELDLNLPPLENNLNLKLQLSL
Subjt:  LKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

TrEMBL top hitse value%identityAlignment
A0A1S3C722 zinc finger protein ZAT12-like8.2e-4675.19Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNF-NANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR--NTA
        MVDC   LSK+EEP RKN     PAADS K+FVCKTCNREFSSFQALGGHR SH KPNF +ANGPPTK KAH+CPICGL FP+GQALGGHMRRHR   T 
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNF-NANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR--NTA

Query:  AAAVLKKSDGCGKRVFELDLNLPPLENNLNLKL
        AAAVL+KSDG  KR F LDLNL P+ENNL L+L
Subjt:  AAAVLKKSDGCGKRVFELDLNLPPLENNLNLKL

A0A6J1GAS1 zinc finger protein ZAT12-like isoform X16.0e-73100Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA
        MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA

Query:  VLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        VLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  VLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

A0A6J1GAT3 zinc finger protein ZAT12-like isoform X29.1e-45100Show/hide
Query:  ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

A0A6J1KAY6 zinc finger protein ZAT12-like isoform X23.4e-4498.88Show/hide
Query:  ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR+TAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

A0A6J1KCM4 zinc finger protein ZAT12-like isoform X13.0e-7298.51Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA
        MVDCLMLLSKMEEPRRKNGFAPTPAADSDK+FVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR+TAAAA
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA

Query:  VLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
        VLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL
Subjt:  VLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

SwissProt top hitse value%identityAlignment
Q42410 Zinc finger protein ZAT122.2e-2748Show/hide
Query:  DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANG----PPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAA
        +CLMLLS++ +     G       D  ++F CKTC ++F SFQALGGHR SH KPN +A         K+ +H CPICG++FP+GQALGGHMRRHRN + 
Subjt:  DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANG----PPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAA

Query:  AA----------------VLKKSDGCGKRVFELDLNLPPLENNLNLKLQL
        AA                 LKKS   GKRV  LDL+L  + +NLNLKL+L
Subjt:  AA----------------VLKKSDGCGKRVFELDLNLPPLENNLNLKLQL

Q42453 Zinc finger protein ZAT71.9e-2345.03Show/hide
Query:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------PNFNANGPPTKSK-AHECPICGLDFPIGQALGGHMRRHRN-
        CLMLLS++       G         +++F CKTC +EFSSFQALGGHR SH K      P+   +    K+K +H CPICG+ FP+GQALGGHMRRHRN 
Subjt:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------PNFNANGPPTKSK-AHECPICGLDFPIGQALGGHMRRHRN-

Query:  --------------TAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL
                      T     LKK    GKRV  LDL+L  +E+ +N KL+L
Subjt:  --------------TAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL

Q9LFG0 Zinc finger protein ZAT187.0e-1839.86Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPA-ADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSK-----AHECPICGLDFPIGQALGGHMRRHR
        +V+ LM+LS+    ++ +    T +  + +  F CKTCNR+F SFQALGGHR SH KP    +    K +      H+C IC   F  GQALGGHMR+HR
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPA-ADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSK-----AHECPICGLDFPIGQALGGHMRRHR

Query:  NT-------AAAAVLKKS--DGCGKRVFELDLNLPPLENNLNL
         +         + V  +   + C      LDLNL PLEN+L L
Subjt:  NT-------AAAAVLKKS--DGCGKRVFELDLNLPPLENNLNL

Q9LX85 Zinc finger protein ZAT82.3e-2143.51Show/hide
Query:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------PNFNANGPPTKSK---AHECPICGLDFPIGQALGGHMRRHR
        CLMLLS++ E                ++F CKTC +EFSSFQALGGHR SH K      P+   +    K+K   +H CPICG++FP+GQALGGHMRRHR
Subjt:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------PNFNANGPPTKSK---AHECPICGLDFPIGQALGGHMRRHR

Query:  N----------------TAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL
        +                T     LKKS   GKRV  LDL+   +E+ +N KL+L
Subjt:  N----------------TAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL

Q9SLD4 Zinc finger protein ZAT111.8e-2142.66Show/hide
Query:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTK--------SKAHECPICGLDFPIGQALGGHMRRHRN
        CLM+L++    ++      T +  S++ F CKTCN+ FSSFQALGGHR SH KP         K        +  H+C IC   F  GQALGGHMRRHR+
Subjt:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTK--------SKAHECPICGLDFPIGQALGGHMRRHRN

Query:  T------------AAAAVLKKSDGCGKRVFELDLNLPPLENNL
        +             +  VLK+  G  KR+  LDLNL PLEN+L
Subjt:  T------------AAAAVLKKSDGCGKRVFELDLNLPPLENNL

Arabidopsis top hitse value%identityAlignment
AT2G28710.1 C2H2-type zinc finger family protein4.5e-2846.67Show/hide
Query:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK-PNFNANGPPT----KSKAHECPICGLDFPIGQALGGHMRRHRN
        M +CL+LLSK  +   K+           ++F CKTCN+EF SFQALGGHR SH +      + PP+    K   HECPICG +F +GQALGGHMR+HR 
Subjt:  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK-PNFNANGPPT----KSKAHECPICGLDFPIGQALGGHMRRHRN

Query:  -------------TAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL
                     TA   + K   G GKRV  LDLNL PLEN  +LKL+L
Subjt:  -------------TAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL

AT2G37430.1 C2H2 and C2HC zinc fingers superfamily protein1.3e-2242.66Show/hide
Query:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTK--------SKAHECPICGLDFPIGQALGGHMRRHRN
        CLM+L++    ++      T +  S++ F CKTCN+ FSSFQALGGHR SH KP         K        +  H+C IC   F  GQALGGHMRRHR+
Subjt:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTK--------SKAHECPICGLDFPIGQALGGHMRRHRN

Query:  T------------AAAAVLKKSDGCGKRVFELDLNLPPLENNL
        +             +  VLK+  G  KR+  LDLNL PLEN+L
Subjt:  T------------AAAAVLKKSDGCGKRVFELDLNLPPLENNL

AT3G46070.1 C2H2-type zinc finger family protein1.1e-2343.12Show/hide
Query:  CLMLLSKM-EEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK----PNFNANGPP-------TKSKAHECPICGLDFPIGQALGGHMR
        CLMLLS + E   RK            ++F CKTC R+F SFQALGGHR SH+K     + +  G P       T + AH CPICGL+FP+GQALGGHMR
Subjt:  CLMLLSKM-EEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK----PNFNANGPP-------TKSKAHECPICGLDFPIGQALGGHMR

Query:  RHRN-------------------TAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL
        +HRN                   T     LKKS   GKRV  LD +L  +E+ +N +L+L
Subjt:  RHRN-------------------TAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL

AT3G46090.1 C2H2 and C2HC zinc fingers superfamily protein1.3e-2445.03Show/hide
Query:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------PNFNANGPPTKSK-AHECPICGLDFPIGQALGGHMRRHRN-
        CLMLLS++       G         +++F CKTC +EFSSFQALGGHR SH K      P+   +    K+K +H CPICG+ FP+GQALGGHMRRHRN 
Subjt:  CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------PNFNANGPPTKSK-AHECPICGLDFPIGQALGGHMRRHRN-

Query:  --------------TAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL
                      T     LKK    GKRV  LDL+L  +E+ +N KL+L
Subjt:  --------------TAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL

AT5G59820.1 C2H2-type zinc finger family protein1.5e-2848Show/hide
Query:  DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANG----PPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAA
        +CLMLLS++ +     G       D  ++F CKTC ++F SFQALGGHR SH KPN +A         K+ +H CPICG++FP+GQALGGHMRRHRN + 
Subjt:  DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANG----PPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAA

Query:  AA----------------VLKKSDGCGKRVFELDLNLPPLENNLNLKLQL
        AA                 LKKS   GKRV  LDL+L  + +NLNLKL+L
Subjt:  AA----------------VLKKSDGCGKRVFELDLNLPPLENNLNLKLQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGATTGCTTAATGTTGCTATCCAAAATGGAGGAGCCACGGCGGAAGAACGGTTTCGCTCCGACGCCGGCGGCGGATTCCGACAAGATTTTTGTCTGTAAAACGTG
TAATAGAGAATTCTCATCTTTCCAGGCTTTAGGAGGGCATAGAACCAGCCACACGAAGCCCAATTTCAACGCTAACGGCCCACCAACTAAGTCCAAGGCCCATGAATGCC
CAATTTGTGGGCTTGATTTTCCGATTGGACAAGCGTTGGGCGGTCACATGAGGCGCCACCGGAACACCGCCGCCGCCGCCGTATTGAAGAAGTCCGATGGCTGTGGGAAA
AGAGTTTTTGAGTTGGATTTGAACTTGCCGCCATTAGAGAACAATTTGAATTTGAAGTTGCAGCTGAGTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGATTGCTTAATGTTGCTATCCAAAATGGAGGAGCCACGGCGGAAGAACGGTTTCGCTCCGACGCCGGCGGCGGATTCCGACAAGATTTTTGTCTGTAAAACGTG
TAATAGAGAATTCTCATCTTTCCAGGCTTTAGGAGGGCATAGAACCAGCCACACGAAGCCCAATTTCAACGCTAACGGCCCACCAACTAAGTCCAAGGCCCATGAATGCC
CAATTTGTGGGCTTGATTTTCCGATTGGACAAGCGTTGGGCGGTCACATGAGGCGCCACCGGAACACCGCCGCCGCCGCCGTATTGAAGAAGTCCGATGGCTGTGGGAAA
AGAGTTTTTGAGTTGGATTTGAACTTGCCGCCATTAGAGAACAATTTGAATTTGAAGTTGCAGCTGAGTTTATAG
Protein sequenceShow/hide protein sequence
MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAVLKKSDGCGK
RVFELDLNLPPLENNLNLKLQLSL