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CmoCh01G006200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G006200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR3-like
Genome locationCmo_Chr01:3206612..3207092
RNA-Seq ExpressionCmoCh01G006200
SyntenyCmoCh01G006200
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8039043.1 hypothetical protein FH972_011491 [Carpinus fangiana]3.7e-1644.44Show/hide
Query:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDH----------DVDHESK----------------SVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPK
        M + +S + LSE D++AMEF FL+       +DH          + + E+K                 VEDD++GFKTPTSL+HKIPA L+CP APRKPK
Subjt:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDH----------DVDHESK----------------SVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPK

Query:  SRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGL
        + P+ KRKA  RQR+ LDLS++I++LFP   L  L
Subjt:  SRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGL

KAG6607237.1 hypothetical protein SDJN03_00579, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5294.87Show/hide
Query:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHESKSVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSL
        MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHD+DHESKSVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSL
Subjt:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHESKSVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSL

Query:  FPADFLVGLGALQIDLV
        FPADFLVGLG ++I +V
Subjt:  FPADFLVGLGALQIDLV

KAG7036922.1 hypothetical protein SDJN02_00542, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-5198.18Show/hide
Query:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHESKSVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSL
        MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHD+DHESKSV+DDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSL
Subjt:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHESKSVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSL

Query:  FPADFLVGLG
        FPADFLVGLG
Subjt:  FPADFLVGLG

XP_011658114.1 cyclin-dependent protein kinase inhibitor SMR3 [Cucumis sativus]1.6e-3572.88Show/hide
Query:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHE--------SKSVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLD
        M LFNS+ILLSENDV++MEFTFLL Y+ SK  D + D +        S SVEDDDNGFKTPTSLEHKIP SL+CPMAPRKPK R + KRKAVER RL LD
Subjt:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHE--------SKSVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLD

Query:  LSSEIQSLFPADFLVGLG
        LSSEIQSLFPA+FLVGLG
Subjt:  LSSEIQSLFPADFLVGLG

XP_016902107.1 PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo]1.5e-3369.57Show/hide
Query:  FNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHESKS--------VEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSS
        FNS+ILLSENDV++MEFTFLL Y+ SK  D + D + ++        V+DDDNGFKTPTSLEHKIP S++CPMAPRKPK R + KRKAVER RL LDLSS
Subjt:  FNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHESKS--------VEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSS

Query:  EIQSLFPADFLVGLG
        EIQSLFPA+FLVGLG
Subjt:  EIQSLFPADFLVGLG

TrEMBL top hitse value%identityAlignment
A0A0A0LY05 Uncharacterized protein7.7e-3672.88Show/hide
Query:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHE--------SKSVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLD
        M LFNS+ILLSENDV++MEFTFLL Y+ SK  D + D +        S SVEDDDNGFKTPTSLEHKIP SL+CPMAPRKPK R + KRKAVER RL LD
Subjt:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHE--------SKSVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLD

Query:  LSSEIQSLFPADFLVGLG
        LSSEIQSLFPA+FLVGLG
Subjt:  LSSEIQSLFPADFLVGLG

A0A1S4E1K5 cyclin-dependent protein kinase inhibitor SMR3-like7.3e-3469.57Show/hide
Query:  FNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHESKS--------VEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSS
        FNS+ILLSENDV++MEFTFLL Y+ SK  D + D + ++        V+DDDNGFKTPTSLEHKIP S++CPMAPRKPK R + KRKAVER RL LDLSS
Subjt:  FNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHESKS--------VEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSS

Query:  EIQSLFPADFLVGLG
        EIQSLFPA+FLVGLG
Subjt:  EIQSLFPADFLVGLG

A0A5A7VIY0 Cyclin-dependent protein kinase inhibitor SMR3-like7.3e-3469.57Show/hide
Query:  FNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHESKS--------VEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSS
        FNS+ILLSENDV++MEFTFLL Y+ SK  D + D + ++        V+DDDNGFKTPTSLEHKIP S++CPMAPRKPK R + KRKAVER RL LDLSS
Subjt:  FNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHESKS--------VEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSS

Query:  EIQSLFPADFLVGLG
        EIQSLFPA+FLVGLG
Subjt:  EIQSLFPADFLVGLG

A0A660KRH4 Uncharacterized protein1.8e-1644.44Show/hide
Query:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDH----------DVDHESK----------------SVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPK
        M + +S + LSE D++AMEF FL+       +DH          + + E+K                 VEDD++GFKTPTSL+HKIPA L+CP APRKPK
Subjt:  MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDH----------DVDHESK----------------SVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPK

Query:  SRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGL
        + P+ KRKA  RQR+ LDLS++I++LFP   L  L
Subjt:  SRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGL

A0A7N2KPB5 Uncharacterized protein3.7e-1466.2Show/hide
Query:  ESKSVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGL
        E + VEDDD+GF+TPTSL+HKIP SL+CP APRKPK  P  KRKA  R+R+ LDLS+EI SLFP   LV L
Subjt:  ESKSVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G02420.1 unknown protein1.2e-0444.59Show/hide
Query:  DVDHESKSVEDDDNGFKTPTSLEHKIP--ASLRCPMAPRKPKSRPM--MKRKAVE---RQRLFLDLSSEIQSLF
        D DHE  +V +++ G KTPTS +HKIP      CP APRKPK       KRK        R+ +DLS EI+  F
Subjt:  DVDHESKSVEDDDNGFKTPTSLEHKIP--ASLRCPMAPRKPKSRPM--MKRKAVE---RQRLFLDLSSEIQSLF

AT5G59360.1 unknown protein7.7e-0434.04Show/hide
Query:  HQDHDVDHESKSVEDDDNGFKTPTSLEH----KIPASLR-------C-PMAPRKPKSRPMMKRKA--VERQRLFLDLSSEIQSLFPADFLVGLG
        HQ    D E ++++D   G +     +     KIP + R       C P  PRKPK+ P MKR+   V+R  +FLD++ E++S+FP   L   G
Subjt:  HQDHDVDHESKSVEDDDNGFKTPTSLEH----KIPASLR-------C-PMAPRKPKSRPMMKRKA--VERQRLFLDLSSEIQSLFPADFLVGLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTCTTCAATTCTACTATCTTACTCTCTGAAAATGATGTAAGCGCCATGGAATTCACTTTTCTTCTCACATACTTGACTTCCAAACATCAAGACCACGACGTCGA
CCACGAAAGCAAATCTGTTGAAGACGATGACAATGGGTTCAAAACTCCGACTTCTTTGGAGCATAAAATCCCAGCAAGTCTCCGGTGTCCGATGGCGCCGAGGAAACCGA
AATCTCGACCGATGATGAAGCGGAAGGCAGTCGAACGACAGCGTTTGTTTCTGGATCTGTCGAGCGAAATTCAATCTTTGTTTCCAGCTGATTTTCTTGTAGGGCTTGGT
GCTCTTCAAATTGATCTTGTAGAAAATGTGGGGTTTCTCCGGTCGTCTTCTCCGACCACCTGCAACTTTTTAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTCTTCAATTCTACTATCTTACTCTCTGAAAATGATGTAAGCGCCATGGAATTCACTTTTCTTCTCACATACTTGACTTCCAAACATCAAGACCACGACGTCGA
CCACGAAAGCAAATCTGTTGAAGACGATGACAATGGGTTCAAAACTCCGACTTCTTTGGAGCATAAAATCCCAGCAAGTCTCCGGTGTCCGATGGCGCCGAGGAAACCGA
AATCTCGACCGATGATGAAGCGGAAGGCAGTCGAACGACAGCGTTTGTTTCTGGATCTGTCGAGCGAAATTCAATCTTTGTTTCCAGCTGATTTTCTTGTAGGGCTTGGT
GCTCTTCAAATTGATCTTGTAGAAAATGTGGGGTTTCTCCGGTCGTCTTCTCCGACCACCTGCAACTTTTTAGCTTAA
Protein sequenceShow/hide protein sequence
MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDVDHESKSVEDDDNGFKTPTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGLG
ALQIDLVENVGFLRSSSPTTCNFLA