; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G006590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G006590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEncodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Genome locationCmo_Chr01:3364708..3369463
RNA-Seq ExpressionCmoCh01G006590
SyntenyCmoCh01G006590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457434.1 PREDICTED: uncharacterized protein LOC103497123 [Cucumis melo]1.8e-5582.73Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-VGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPS
        MEGKS GYQTSSFVADLFDV+E+PLSSASG  A +FPSPQK  G  +SSS DWLKQTNGNQP HT+QGNSGGSLEPCHLSSSLYYGGQDGY +APS GPS
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-VGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPS

Query:  --PPPPSTLKKSGG-EDDPNGNNSQPASRGNWWQGSLYY
          PPPP T+KKSGG +DDPNGNNSQPASRGNWWQGSLYY
Subjt:  --PPPPSTLKKSGG-EDDPNGNNSQPASRGNWWQGSLYY

XP_022948634.1 uncharacterized protein LOC111452257 isoform X1 [Cucurbita moschata]1.5e-70100Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSP
        MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSP
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSP

Query:  PPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY
        PPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY
Subjt:  PPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY

XP_023523189.1 uncharacterized protein LOC111787454 [Cucurbita pepo subsp. pepo]1.8e-6696.3Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSP
        MEGK NGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSRTSSS DWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGY EAPS GPSP
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSP

Query:  PPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY
        PPPS LKKSGGEDDPNGNNSQPASRGNWWQGSLYY
Subjt:  PPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY

XP_023525537.1 uncharacterized protein LOC111789122 [Cucurbita pepo subsp. pepo]1.8e-6695.56Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSP
        MEGK NGYQTSSFVADLFDVEESPLSSASGVLA MFPSPQKVGSRTSSSGDWLKQTNGNQPRHTK+GNSGGSLEPCHLSSSLYYGGQDGY EAPS GPSP
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSP

Query:  PPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY
        PPPS LKKSGGEDDPNGNNSQPASRGNWWQGSLYY
Subjt:  PPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY

XP_038894691.1 uncharacterized protein LOC120083160 [Benincasa hispida]8.2e-5684.56Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-VGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPS
        MEGKS GYQ SSFVADLFDV+E PLSS SGV AA+F SPQK  G  +SSSGDWLKQTNGNQPRHT+QGNS GSLEPCHLSSSLYYGGQDGY +APS GPS
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-VGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPS

Query:  PPPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY
        PP P T+KKSGGEDDPNGNNSQPASRGNWWQGSLYY
Subjt:  PPPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY

TrEMBL top hitse value%identityAlignment
A0A0A0LXG9 Uncharacterized protein1.1e-5380.58Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-VGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPS
        MEGKS GYQ SSFVADLFDV+E+PLSSASG  A +FPSPQK  G  +SSS DWLKQTNG+QP HT+QGNSGGSLEPCHLSSSLYYGGQDGY +A S GPS
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-VGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPS

Query:  --PPPPSTLKKSGG-EDDPNGNNSQPASRGNWWQGSLYY
          PPPP T+KKSGG +DDPNGNNSQPASRGNWWQGSLYY
Subjt:  --PPPPSTLKKSGG-EDDPNGNNSQPASRGNWWQGSLYY

A0A1S3C5M6 uncharacterized protein LOC1034971238.8e-5682.73Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-VGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPS
        MEGKS GYQTSSFVADLFDV+E+PLSSASG  A +FPSPQK  G  +SSS DWLKQTNGNQP HT+QGNSGGSLEPCHLSSSLYYGGQDGY +APS GPS
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-VGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPS

Query:  --PPPPSTLKKSGG-EDDPNGNNSQPASRGNWWQGSLYY
          PPPP T+KKSGG +DDPNGNNSQPASRGNWWQGSLYY
Subjt:  --PPPPSTLKKSGG-EDDPNGNNSQPASRGNWWQGSLYY

A0A5D3BEB7 Uncharacterized protein8.8e-5682.73Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-VGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPS
        MEGKS GYQTSSFVADLFDV+E+PLSSASG  A +FPSPQK  G  +SSS DWLKQTNGNQP HT+QGNSGGSLEPCHLSSSLYYGGQDGY +APS GPS
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQK-VGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPS

Query:  --PPPPSTLKKSGG-EDDPNGNNSQPASRGNWWQGSLYY
          PPPP T+KKSGG +DDPNGNNSQPASRGNWWQGSLYY
Subjt:  --PPPPSTLKKSGG-EDDPNGNNSQPASRGNWWQGSLYY

A0A6J1GAG9 uncharacterized protein LOC111452257 isoform X17.4e-71100Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSP
        MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSP
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSP

Query:  PPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY
        PPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY
Subjt:  PPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY

A0A6J1I4B7 uncharacterized protein LOC1114695171.3e-5481.62Show/hide
Query:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSR-TSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPS
        MEGKS GYQ SSFVADLFDV+E P +S+S V AA+FPSPQK G R +SSSGDWLKQ NGNQP H +QGNSGGSLEPCHLSSSLYYGGQDGY +APS GPS
Subjt:  MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSR-TSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPS

Query:  PPPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY
        P P  TLKKSGGEDDPNGNN QPASRGNWWQGSLYY
Subjt:  PPPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G39855.2 unknown protein2.5e-1038.28Show/hide
Query:  VEESPLSSASGVLAAMFPSPQKV--GSRTSSSGDWLKQ-TNGNQP---------RHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSPPPPSTLK
        V  S  SS +G+  ++FP P  V  G+ TS +G    Q TN   P         +  K   S  +  PC+LSSS+YYGGQD Y  + +       P   K
Subjt:  VEESPLSSASGVLAAMFPSPQKV--GSRTSSSGDWLKQ-TNGNQP---------RHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSPPPPSTLK

Query:  KSGGEDDPNGNNSQPASRGNWWQGSLYY
        K G E D     S+ ASRGNWW+GS  Y
Subjt:  KSGGEDDPNGNNSQPASRGNWWQGSLYY

AT3G55646.1 unknown protein7.2e-1038.1Show/hide
Query:  VEESPLSSASGVLAAMFPSP--QKVGSRT--SSSGDWLKQTNGN------QPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSPPPPSTLKKS
        V  S  SSA+G+  ++FP P   ++G +   +S G  +K  + N        +  K   +  +  PCHLSSSLYYGGQ+ Y        +     T KK 
Subjt:  VEESPLSSASGVLAAMFPSP--QKVGSRT--SSSGDWLKQTNGN------QPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSPPPPSTLKKS

Query:  GGEDDPNGNNSQPASRGNWWQGSLYY
        G E D     S+ ASRGNWW+GSLYY
Subjt:  GGEDDPNGNNSQPASRGNWWQGSLYY

AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).8.5e-1943.67Show/hide
Query:  MEGK------SNGYQTSSFVADLFDVEESPLS-SASGVLAAMFPSPQKVGSR------TSSSGDW---LKQTNGNQPRHTKQGNSGGS-------LEPCH
        MEG+      S+   +SS  ++LF   E+P S S+SG+L ++FP P KV  R      T + G W     +T GN  R+ +Q  + GS       ++PCH
Subjt:  MEGK------SNGYQTSSFVADLFDVEESPLS-SASGVLAAMFPSPQKVGSR------TSSSGDW---LKQTNGNQPRHTKQGNSGGS-------LEPCH

Query:  LSSSLYYGGQDGYCEAPSGGPSPPPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY
        LSSS+YYGG D Y + P    S    ST KK GGEDD     S  ASRGNWWQGSLYY
Subjt:  LSSSLYYGGQDGYCEAPSGGPSPPPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY

AT5G05965.1 unknown protein5.2e-0836.61Show/hide
Query:  SSASGVLAAMFPSP--QKVGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSPPPPSTLKKSGGEDDPNGNNSQPA
        SS S +L ++FP P  +K GS T+       +  GN  + T + +S    E  + SSS+YYGGQ  Y    + G S  P    K++    D     +   
Subjt:  SSASGVLAAMFPSP--QKVGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSPPPPSTLKKSGGEDDPNGNNSQPA

Query:  SRGNWWQGSLYY
        SRGNWW+GSLYY
Subjt:  SRGNWWQGSLYY

AT5G59080.1 unknown protein1.7e-2246.81Show/hide
Query:  MEGK----SNGYQTSSFVADLFDVEE-SPLSSASGVLAAMFPSPQKVGSRTSSSGDWLKQTNGNQPRHTKQGNS-GGSLEPCHLSSSLYYGGQDGYCEAP
        MEGK    S+   +SSF A+LF  ++ SP SS+SG+ + MFP P K  +R  S+       +G+Q +  +  N+    +EPCHLSSSLYYGGQD Y  + 
Subjt:  MEGK----SNGYQTSSFVADLFDVEE-SPLSSASGVLAAMFPSPQKVGSRTSSSGDWLKQTNGNQPRHTKQGNS-GGSLEPCHLSSSLYYGGQDGYCEAP

Query:  SGGPSPPPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY
        +    PP  +  ++S GEDD NG N Q  SRGNWWQGSLYY
Subjt:  SGGPSPPPPSTLKKSGGEDDPNGNNSQPASRGNWWQGSLYY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAAAGTCTAATGGATATCAGACCTCCTCTTTTGTTGCCGATCTTTTCGATGTCGAGGAGTCGCCATTGTCATCAGCATCAGGAGTTCTTGCAGCAATGTTTCC
TTCTCCACAGAAGGTGGGAAGCAGGACTTCTAGCTCTGGGGATTGGCTAAAACAGACCAACGGGAATCAACCACGGCACACAAAGCAAGGAAATTCAGGAGGGAGCTTGG
AGCCTTGTCATCTGAGTTCATCTCTATACTATGGAGGACAAGATGGATATTGCGAGGCCCCATCAGGTGGACCATCCCCACCCCCACCGTCCACTTTGAAGAAAAGTGGG
GGAGAAGATGATCCAAATGGAAACAACTCTCAACCTGCTTCTAGGGGAAACTGGTGGCAAGGTTCCCTTTATTATTAG
mRNA sequenceShow/hide mRNA sequence
TTGCTTCGTTCTCCTCTGGGTTTTCGCCTTCACAAACAGAGACTTGAGGTTGAAATTGAAGCGATTCCATTCAAACCTTCCATGATTTCCCGGAAGAAAATGCGCCCATC
TTCAGGGTGTGGTGGAATCTCAGGGTAATTTTGTTTGGTTAGAAGGAAAGATTGAGAGAAAAATGGAGGGAAAGTCTAATGGATATCAGACCTCCTCTTTTGTTGCCGAT
CTTTTCGATGTCGAGGAGTCGCCATTGTCATCAGCATCAGGAGTTCTTGCAGCAATGTTTCCTTCTCCACAGAAGGTGGGAAGCAGGACTTCTAGCTCTGGGGATTGGCT
AAAACAGACCAACGGGAATCAACCACGGCACACAAAGCAAGGAAATTCAGGAGGGAGCTTGGAGCCTTGTCATCTGAGTTCATCTCTATACTATGGAGGACAAGATGGAT
ATTGCGAGGCCCCATCAGGTGGACCATCCCCACCCCCACCGTCCACTTTGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTCTCAACCTGCTTCTAGGGGA
AACTGGTGGCAAGGTTCCCTTTATTATTAGGACCTCTGCCTTGCCTTGGCGGCACATGAATCCCCACCTATTTTCTAAGTCATGGACAACACAGCTTGAACAAACATGAC
CGTCAACCGCCACCGACCGAGAAGAGGAAGCAACTGAAGGAGTGGAGGTGGTGGGGTCAGTGTTGTTGCTTAAATGAATAAAAAGGAGAGGCGTCTGGGAAAGAAACATG
TCGGAAGGCACTCATTTTTTAACTTAAGATAAGAATTCCAAAAAGAGATTAAGATCCAAAAGTTGGAATAACATGTTATTTGTTTCCTTTCTTCAACATGATTATCACTA
ATAC
Protein sequenceShow/hide protein sequence
MEGKSNGYQTSSFVADLFDVEESPLSSASGVLAAMFPSPQKVGSRTSSSGDWLKQTNGNQPRHTKQGNSGGSLEPCHLSSSLYYGGQDGYCEAPSGGPSPPPPSTLKKSG
GEDDPNGNNSQPASRGNWWQGSLYY