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CmoCh01G006630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G006630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCopper transporter
Genome locationCmo_Chr01:3384798..3386965
RNA-Seq ExpressionCmoCh01G006630
SyntenyCmoCh01G006630
Gene Ontology termsGO:0006878 - cellular copper ion homeostasis (biological process)
GO:0035434 - copper ion transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005375 - copper ion transmembrane transporter activity (molecular function)
InterPro domainsIPR007274 - Ctr copper transporter


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607279.1 Copper transporter 1, partial [Cucurbita argyrosperma subsp. sororia]3.7e-43100Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

XP_022157910.1 copper transporter 1-like [Momordica charantia]3.3e-3176.53Show/hide
Query:  MEFHMTFFWGKSAEILFAGWP--GRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        ME H+TF+WGK+ EILF+GWP  GR+  SY +AL FVFL+AF VEWLSH +LTAS A+DV AG VQTA+YGVRVGLAFVVMLAVMSFNVGVLLAAVAG
Subjt:  MEFHMTFFWGKSAEILFAGWP--GRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

XP_022948639.1 copper transporter 1-like [Cucurbita moschata]3.7e-43100Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

XP_022998910.1 copper transporter 1-like [Cucurbita maxima]1.9e-4297.92Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        MEFHMTFFWGKSAEILFAGWPGR+SLSYAIALVF+FLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

XP_023525766.1 copper transporter 1-like [Cucurbita pepo subsp. pepo]1.4e-4298.96Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        MEFHMTFFWGKSAEILFAGWPGR+SLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

TrEMBL top hitse value%identityAlignment
A0A5A7SL08 Copper transporter2.7e-3173.2Show/hide
Query:  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        KME HMTF+WGK+ EILF GWPGR+  SY +AL+FVFL+AF VEWLSHTK T  V  ++ AG VQT LYGVRVGLAF+VMLAVMS+NVGVLLAAV G
Subjt:  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

A0A5D3BC00 Copper transporter2.7e-3173.2Show/hide
Query:  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        KME HMTF+WGK+ EILF GWPGR+  SY +AL+FVFL+AF VEWLSHTK T  V  ++ AG VQT LYGVRVGLAF+VMLAVMS+NVGVLLAAV G
Subjt:  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

A0A6J1DUC3 Copper transporter1.6e-3176.53Show/hide
Query:  MEFHMTFFWGKSAEILFAGWP--GRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        ME H+TF+WGK+ EILF+GWP  GR+  SY +AL FVFL+AF VEWLSH +LTAS A+DV AG VQTA+YGVRVGLAFVVMLAVMSFNVGVLLAAVAG
Subjt:  MEFHMTFFWGKSAEILFAGWP--GRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

A0A6J1GAH5 Copper transporter1.8e-43100Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

A0A6J1KDT9 Copper transporter9.0e-4397.92Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        MEFHMTFFWGKSAEILFAGWPGR+SLSYAIALVF+FLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

SwissProt top hitse value%identityAlignment
Q39065 Copper transporter 12.4e-2451.3Show/hide
Query:  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDV---FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        KM  HMTFFWGK+ E+LF+GWPG +S  YA+ L+FVF +A   EWL+H+ L      D     AG +QTA+Y +R+GLA++VMLAVMSFN GV L A+AG
Subjt:  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDV---FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

Query:  SPEYNFKFKIKYFEN
               F  + F N
Subjt:  SPEYNFKFKIKYFEN

Q5ZD08 Copper transporter 33.7e-1750Show/hide
Query:  QEKMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKL-TASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        + K   HMTF+WGK++EILF GWPG +   YA+AL  VF +A  +E+L   ++  +S            A++ VRVGLA+++MLA+MSFNVGVLLAAVAG
Subjt:  QEKMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKL-TASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

Q8GWP3 Copper transporter 61.6e-2054.26Show/hide
Query:  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA-GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        HMTFFWGK+ EILF+GWPG +   Y + L+ VFL+A  VEWL+H+ +         A G VQTA+Y ++ GLA++VMLAVMSFN GV + A+AG
Subjt:  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA-GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

Q94EE4 Copper transporter 16.2e-1748.98Show/hide
Query:  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVA-----DDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        HMTFFWGK++E+LF  WPG     YA+AL+FVF +A  VE+L   +  A +A          G  + A++ VRVG+A+++MLA+MSFN GV L AVAG
Subjt:  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVA-----DDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

Q9STG2 Copper transporter 28.4e-2252.58Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTK-LTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        M  HMTFFWGK+ E+LF+GWPG +S  YA+ L+ +FL+A   EWL+H+  L  S + +  AG  QTA+Y ++ GL+++VMLAVMSFN GV + A+AG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTK-LTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

Arabidopsis top hitse value%identityAlignment
AT2G26975.1 Ctr copper transporter family1.1e-2154.26Show/hide
Query:  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA-GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        HMTFFWGK+ EILF+GWPG +   Y + L+ VFL+A  VEWL+H+ +         A G VQTA+Y ++ GLA++VMLAVMSFN GV + A+AG
Subjt:  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA-GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

AT2G37925.1 copper transporter 49.9e-1842.34Show/hide
Query:  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASV---ADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEY
        H TF+WG + ++LF+GWPG +   YA+AL+FVF +AF  EWL+     +S+   AD +     +TA+Y V+ G +++V+LAV+SFN GV LAA+ G    
Subjt:  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASV---ADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGSPEY

Query:  NFKFKIKYFEN
           F+ + F N
Subjt:  NFKFKIKYFEN

AT3G46900.1 copper transporter 26.0e-2352.58Show/hide
Query:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTK-LTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        M  HMTFFWGK+ E+LF+GWPG +S  YA+ L+ +FL+A   EWL+H+  L  S + +  AG  QTA+Y ++ GL+++VMLAVMSFN GV + A+AG
Subjt:  MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTK-LTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

AT5G59030.1 copper transporter 11.7e-2551.3Show/hide
Query:  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDV---FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        KM  HMTFFWGK+ E+LF+GWPG +S  YA+ L+FVF +A   EWL+H+ L      D     AG +QTA+Y +R+GLA++VMLAVMSFN GV L A+AG
Subjt:  KMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDV---FAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG

Query:  SPEYNFKFKIKYFEN
               F  + F N
Subjt:  SPEYNFKFKIKYFEN

AT5G59040.1 copper transporter 31.7e-1748.39Show/hide
Query:  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG
        HMTFFWGK+ E+LF GWPG +   Y + L  +F+++   E LS      S    +  G +QTA+Y VR  L+++VMLAVMSFN GV +AA+AG
Subjt:  HMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATCTAGCCGATGTAGAGTTGCCGATGTGCAGAAAAACAAAGATCCATTTTCCCAAGAAAAAATGGAATTCCACATGACATTTTTCTGGGGAAAGTCGGCGGAGAT
TCTGTTCGCCGGCTGGCCTGGCCGGAACTCACTCTCTTACGCCATCGCCTTAGTCTTCGTCTTTCTCGTAGCCTTCGCCGTGGAGTGGCTGTCGCACACTAAACTCACCG
CCTCTGTCGCCGATGACGTCTTCGCCGGCTTTGTTCAGACCGCCCTGTACGGCGTCCGGGTGGGGTTGGCTTTTGTCGTCATGCTGGCCGTCATGTCATTCAATGTCGGA
GTCCTGCTTGCGGCGGTGGCCGGTTCTCCTGAGTACAATTTTAAATTCAAAATTAAATATTTCGAAAATATATTTTTTTTCAGAAATTCCACAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATATCTAGCCGATGTAGAGTTGCCGATGTGCAGAAAAACAAAGATCCATTTTCCCAAGAAAAAATGGAATTCCACATGACATTTTTCTGGGGAAAGTCGGCGGAGAT
TCTGTTCGCCGGCTGGCCTGGCCGGAACTCACTCTCTTACGCCATCGCCTTAGTCTTCGTCTTTCTCGTAGCCTTCGCCGTGGAGTGGCTGTCGCACACTAAACTCACCG
CCTCTGTCGCCGATGACGTCTTCGCCGGCTTTGTTCAGACCGCCCTGTACGGCGTCCGGGTGGGGTTGGCTTTTGTCGTCATGCTGGCCGTCATGTCATTCAATGTCGGA
GTCCTGCTTGCGGCGGTGGCCGGTTCTCCTGAGTACAATTTTAAATTCAAAATTAAATATTTCGAAAATATATTTTTTTTCAGAAATTCCACAGTCTGA
Protein sequenceShow/hide protein sequence
MISSRCRVADVQKNKDPFSQEKMEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFAGFVQTALYGVRVGLAFVVMLAVMSFNVG
VLLAAVAGSPEYNFKFKIKYFENIFFFRNSTV