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CmoCh01G006690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G006690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmitochondrial import inner membrane translocase subunit TIM10
Genome locationCmo_Chr01:3400386..3404502
RNA-Seq ExpressionCmoCh01G006690
SyntenyCmoCh01G006690
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607285.1 Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3084.52Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK             YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

KAG7036963.1 Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3084.52Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK             YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

KHN46895.1 Mitochondrial import inner membrane translocase subunit Tim10 [Glycine soja]9.0e-3091.55Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MAS   P A DKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

RXI04280.1 hypothetical protein DVH24_038554 [Malus domestica]1.1e-3091.55Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MA+P  PT +DKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

XP_022949393.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita moschata]1.1e-3084.52Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK             YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

TrEMBL top hitse value%identityAlignment
A0A0B2SPQ0 Mitochondrial import inner membrane translocase subunit Tim104.4e-3091.55Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MAS   P A DKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

A0A498K7Q5 RING-CH-type domain-containing protein5.2e-3191.55Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MA+P  PT +DKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

A0A540M5I7 zf-Tim10_DDP domain-containing protein3.1e-2877.38Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFN-------------KYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MA+P  PT +DKEQIFGMAEKEMEYRVELFN             KYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFN-------------KYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

A0A6J1GBZ5 mitochondrial import inner membrane translocase subunit TIM105.2e-3184.52Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK             YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

A0A6J1KDY1 mitochondrial import inner membrane translocase subunit TIM10-like5.2e-3184.52Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK             YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

SwissProt top hitse value%identityAlignment
P87108 Mitochondrial import inner membrane translocase subunit TIM102.3e-0432.86Show/hide
Query:  GPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQ
        G   +  +Q    AE E++   ++FNK             Y E ELN  E+SC+DRCV+KY+     +G+
Subjt:  GPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQ

Q759W7 Mitochondrial import inner membrane translocase subunit TIM106.8e-0430Show/hide
Query:  GPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQ
        G   +  +Q    AE E++   ++FNK             Y E +LN  E++C+DRCV+KY+     +G+
Subjt:  GPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQ

Q9UTE9 Mitochondrial import inner membrane translocase subunit tim102.3e-0438.71Show/hide
Query:  QIFGMAEKEMEYRVELFN-------------KYKESELNMGENSCIDRCVSKYWHVTNLIGQ
        Q   MAE+E+E   ++FN             KY E++L  GE+ CIDRCVSKY+     + Q
Subjt:  QIFGMAEKEMEYRVELFN-------------KYKESELNMGENSCIDRCVSKYWHVTNLIGQ

Q9W2D6 Mitochondrial import inner membrane translocase subunit Tim103.0e-0438.96Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFN-------------KYKESELNMGENSCIDRCVSKYWHVTNLIGQLL
        MA P   TA D+ ++  M E E+E   +L+N             +Y ESEL  GE  CIDRCV+KY  +   IG+ L
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFN-------------KYKESELNMGENSCIDRCVSKYWHVTNLIGQLL

Q9ZW33 Mitochondrial import inner membrane translocase subunit TIM109.4e-2261.9Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASP  P  V KEQ F MA+ EMEYRVELFNK             YKE+ELNMGENSCIDRCVSKYW V  ++GQLL +G+PP+
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

Arabidopsis top hitse value%identityAlignment
AT2G29530.1 Tim10/DDP family zinc finger protein6.7e-2361.9Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASP  P  V KEQ F MA+ EMEYRVELFNK             YKE+ELNMGENSCIDRCVSKYW V  ++GQLL +G+PP+
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

AT2G29530.2 Tim10/DDP family zinc finger protein6.7e-2361.9Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASP  P  V KEQ F MA+ EMEYRVELFNK             YKE+ELNMGENSCIDRCVSKYW V  ++GQLL +G+PP+
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFNK-------------YKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

AT2G29530.3 Tim10/DDP family zinc finger protein9.0e-2047.22Show/hide
Query:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFN-------------------------------------KYKESELNMGENSCIDRCVSKYWHVTNLIGQL
        MASP  P  V KEQ F MA+ EMEYRVELFN                                     +YKE+ELNMGENSCIDRCVSKYW V  ++GQL
Subjt:  MASPTGPTAVDKEQIFGMAEKEMEYRVELFN-------------------------------------KYKESELNMGENSCIDRCVSKYWHVTNLIGQL

Query:  LGSGRPPM
        L +G+PP+
Subjt:  LGSGRPPM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCCGACTGGTCCAACGGCTGTGGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAACTGTTCAACAAGTACAAGGAATCTGA
GCTGAATATGGGTGAAAATAGCTGCATTGATCGCTGTGTTTCCAAGTATTGGCATGTAACCAATTTAATCGGCCAGCTACTTGGCTCTGGTAGACCTCCCATGTGA
mRNA sequenceShow/hide mRNA sequence
AATACATTCTCCTAGCCCAGCCCAAACCCCAGCTCTTAACCATAAACCCTAACTCTCATAAACCTTGTTCCTCCACCTGGGCCTCCTCACCTCTCCGCCGTCCGCCATCT
TCCCCGCCGTATCGACTACAGCTCCGGTCTGCAAATTACGCGGGGTTTTGCCTCCTCCATTAGTTACTGATTGGATTCGTCGAACCCGTTTCAAGACAGAGCTACAATCT
TCAAATTTTGCATTAGTAACTCATTCGAAAGTCTCAATGGCTTCTCCGACTGGTCCAACGGCTGTGGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATA
TCGAGTTGAACTGTTCAACAAGTACAAGGAATCTGAGCTGAATATGGGTGAAAATAGCTGCATTGATCGCTGTGTTTCCAAGTATTGGCATGTAACCAATTTAATCGGCC
AGCTACTTGGCTCTGGTAGACCTCCCATGTGACTTGCTTCCTGATCTGAGTGATTGTTTGGCAAGGCAAAAGCGATAATATAATATTGATGGGTAGACTTAGATCGCATC
CTG
Protein sequenceShow/hide protein sequence
MASPTGPTAVDKEQIFGMAEKEMEYRVELFNKYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM